Nucleic Acids: Structure and Function Quiz
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Questions and Answers

What is the primary function of DNA topoisomerases during DNA replication?

  • Seal nicks in the DNA
  • Relieve torsional stress (correct)
  • Initiate RNA synthesis
  • Unwind the double helix
  • Which of the following accurately describes the role of helicase in DNA replication?

  • Seals nicks left by DNA polymerase
  • Initiates synthesis of RNA primers
  • Removes supercoils formed during replication
  • Unwinds the double helix (correct)
  • What distinguishes eukaryotic DNA polymerases from prokaryotic ones?

  • Involvement in telomere maintenance
  • Distinct activities and types (correct)
  • Presence of RNA primers
  • Ability to proofread
  • What is the primary function of telomeres at the ends of eukaryotic chromosomes?

    <p>Prevent attack by nucleases (C)</p> Signup and view all the answers

    Which of the following statements about telomerase is correct?

    <p>It maintains telomere length (B)</p> Signup and view all the answers

    What are the components of a nucleotide?

    <p>A sugar, a base, and a phosphate group (B)</p> Signup and view all the answers

    What type of bond is formed between nucleotides in nucleic acids?

    <p>Covalent bonds (A)</p> Signup and view all the answers

    How many base pairs approximately are in one complete turn of the DNA double helix?

    <p>10 base pairs (A)</p> Signup and view all the answers

    What is the term for the complete genetic code of an organism?

    <p>Genome (B)</p> Signup and view all the answers

    What type of RNA is produced from the genetic code of a gene?

    <p>mRNA (D)</p> Signup and view all the answers

    Which of the following accurately describes the strands of DNA?

    <p>Anti-parallel and complementary (D)</p> Signup and view all the answers

    What distinguishes DNA from RNA in terms of their sugar component?

    <p>RNA has a ribose sugar (B)</p> Signup and view all the answers

    Which proteins are the major components of chromatin?

    <p>Histones (B)</p> Signup and view all the answers

    What is the effect of histone acetylation on chromatin structure?

    <p>Decreases DNA affinity and decompacts chromatin (C)</p> Signup and view all the answers

    How does DNA replication in eukaryotes differ from prokaryotes?

    <p>Eukaryotic DNA replication is bidirectional with multiple origins (C)</p> Signup and view all the answers

    What role does helicase play during DNA replication?

    <p>Maintains separation of parental DNA strands (C)</p> Signup and view all the answers

    What accurately describes the leading and lagging strands during replication?

    <p>Leading strand is synthesized continuously while lagging strand is discontinuous (C)</p> Signup and view all the answers

    What distinguishes the end of a chromosome from a double strand break?

    <p>Telomeres (A)</p> Signup and view all the answers

    What is the initial requirement for DNA polymerases during DNA synthesis?

    <p>A template DNA strand and a primer with a free 3' end (D)</p> Signup and view all the answers

    What was a significant finding regarding Dolly the sheep's telomeres?

    <p>They were shorter than expected for her chronological age. (C)</p> Signup and view all the answers

    Why is DNA replication described as semi-conservative?

    <p>Each daughter molecule contains one parental and one new strand (C)</p> Signup and view all the answers

    What happens to telomeres in normal human somatic cells with successive cell divisions?

    <p>They shorten. (C)</p> Signup and view all the answers

    What is the primary function of nucleosomes in eukaryotic DNA?

    <p>To package and condense DNA (D)</p> Signup and view all the answers

    Which of the following conditions allows cancer and stem cells to continue dividing without telomere shortening?

    <p>Enhancement of telomerase activity. (A)</p> Signup and view all the answers

    What is the significance of RNA primers during DNA replication?

    <p>They serve as the starting point for DNA polymerase (A)</p> Signup and view all the answers

    Which anticancer drug replaces deoxyribose with arabinose to inhibit DNA synthesis?

    <p>Cytosine arabinoside (B)</p> Signup and view all the answers

    What is a common environmental agent that causes damage to DNA?

    <p>UV radiation (D)</p> Signup and view all the answers

    What is defined as a heritable change in the sequence of nucleotides in DNA?

    <p>Mutation (D)</p> Signup and view all the answers

    What is the primary purpose of telomeres in cells?

    <p>To protect chromosome ends. (A)</p> Signup and view all the answers

    What are the two types of nucleic acids?

    <p>DNA and RNA (A), Deoxyribonucleic acid and ribonucleic acid (D)</p> Signup and view all the answers

    Which of the following bases is not found in DNA?

    <p>Uracil (A)</p> Signup and view all the answers

    What is the primary function of DNA in a cell?

    <p>To store genetic information (B)</p> Signup and view all the answers

    What distinguishes deoxyribose from ribose?

    <p>Deoxyribose has an H instead of an OH group at the 2’ position (C)</p> Signup and view all the answers

    Which molecule serves as the major players in the cell, influencing rates of reactions?

    <p>Proteins (D)</p> Signup and view all the answers

    What is the term for the unidirectional flow of genetic information?

    <p>Central dogma of molecular biology (C)</p> Signup and view all the answers

    How many different bases are found in nucleic acids?

    <p>5 in RNA and 4 in DNA (D)</p> Signup and view all the answers

    What type of genetic information does the nuclear genome primarily contain?

    <p>Maternal and paternal genetic information (B)</p> Signup and view all the answers

    Flashcards

    DNA Topoisomerases

    Enzymes that relieve torsional stress in DNA by removing supercoils that form during unwinding.

    DNA Ligase

    An enzyme that seals nicks in DNA after DNA polymerase fills the gaps left by RNA primers during replication.

    Telomeres

    Protective repetitive stretches of DNA at the ends of chromosomes that shorten with each cell division.

    Telomerase

    An enzyme that maintains telomere length by adding repetitive DNA sequences to the ends of chromosomes.

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    What are the functions of Telomeres?

    1. To protect the structural integrity of the chromosome, preventing attack by nucleases.
    2. To prevent the ends of chromosomes from being recognized as broken DNA.
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    Nucleotide

    A building block of nucleic acids, composed of a sugar, a phosphate group, and a nitrogenous base.

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    3’-5’ phosphodiester linkage

    The bond that connects nucleotides together in a nucleic acid chain, forming a covalent bond between the phosphate group of one nucleotide and the sugar of the next.

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    What is a genome?

    The complete set of genetic instructions for an organism, encoded in its DNA.

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    Gene

    A segment of DNA that carries the instructions for building a specific RNA and/or protein.

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    DNA packaging

    The process by which DNA is tightly compacted and organized within the nucleus of a cell.

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    Chromatin

    The complex of DNA and proteins, primarily histones, that make up the chromosomes in eukaryotic cells.

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    Histones

    Small, basic proteins that bind to DNA and help package it into chromatin.

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    What is the difference between DNA and RNA?

    DNA is double-stranded, contains thymine (T), and has deoxyribose sugar, while RNA is single-stranded, contains uracil (U), and has ribose sugar.

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    Nucleic Acids

    Biomolecules made of nucleotide building blocks that carry genetic information. They are essential for life, directing the synthesis of proteins and controlling cellular processes.

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    Purines

    Double-ringed nitrogenous bases found in nucleic acids. Adenine (A) and Guanine (G) are purines.

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    Pyrimidines

    Single-ringed nitrogenous bases found in nucleic acids. Cytosine (C), Thymine (T), and Uracil (U) are pyrimidines.

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    Deoxyribose

    A five-carbon sugar found in DNA. It differs from ribose by having a hydrogen atom instead of a hydroxyl group at the 2' position.

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    Central Dogma

    The fundamental principle in molecular biology that describes the flow of genetic information from DNA to RNA to protein.

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    Telomere Shortening

    Telomeres shorten with each cell division in normal somatic cells, which limits their lifespan.

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    What makes telomeres important?

    Telomeres are crucial for maintaining genomic stability and preventing premature cell death. They also play a role in aging and disease.

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    Telomeres in cancer cells

    Cancer cells often have mechanisms to prevent telomere shortening, allowing them to divide indefinitely.

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    Nucleoside Analogues

    Modified nucleotides that can inhibit DNA synthesis by interrupting the chain lengthening process.

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    AZT

    An anti-retroviral drug that inhibits HIV replication by terminating DNA chain elongation.

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    Cytosine Arabinoside

    An anticancer drug that halts DNA chain elongation by replacing deoxyribose with arabinose.

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    Causes of DNA Damage

    DNA damage can be induced by environmental factors (chemicals, radiation), errors in cellular processes (replication errors), and natural chemical changes (oxidation).

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    Opposite charges attract

    This principle explains how negatively charged DNA is attracted to positively charged proteins like histones, forming the basis of the nucleosome structure. This interaction is crucial for packaging and compacting DNA within the nucleus.

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    Linker histone H1

    A histone protein that binds to linker DNA, the 50-70 bp of DNA that connects adjacent nucleosomes. It helps further condense the DNA by pulling adjacent nucleosomes closer together.

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    Histone modification

    Changes in the structure and function of histones by processes like acetylation, methylation, or phosphorylation. These alterations affect the charge and shape of histones, influencing DNA accessibility for processes like replication and transcription.

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    DNA replication is semiconservative

    Each new DNA molecule consists of one original parent strand and one newly synthesized strand. This process ensures that the genetic information is passed on accurately to daughter cells.

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    Bidirectional replication with multiple origins

    Eukaryotic DNA replication proceeds in both directions from multiple starting points along the DNA molecule, allowing for faster replication of large genomes.

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    DNA polymerase

    An enzyme that catalyzes the formation of phosphodiester bonds between nucleotides, adding them to the 3' end of a growing DNA chain during replication.

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    Replication fork

    The Y-shaped structure formed during DNA replication, where the parental strands separate and serve as templates for new strands. The leading strand is synthesized continuously, while the lagging strand is synthesized discontinuously in short fragments called Okazaki fragments.

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    Study Notes

    Nucleic Acids: Structure and Function

    • Nucleic acids are composed of nucleotide building blocks (polynucleotides)
    • Two types: ribonucleic acid (RNA) and deoxyribonucleic acid (DNA)
    • Each nucleotide consists of a base, a sugar, and one or more phosphate groups
    • Bases are nitrogen-containing molecules
    • Five different bases: adenine (A), cytosine (C), guanine (G), thymine (T), and uracil (U)
    • A, C, G, and U are found in RNA
    • A, C, G, and T are found in DNA
    • Purines: A and G
    • Pyrimidines: C, T, and U
    • Sugars are monosaccharides (pentoses)
    • Ribose is in RNA
    • Deoxyribose is in DNA
    • Deoxyribose has a H instead of an OH group at the 2' position
    • Phosphates can be mono-, di-, or tri-phosphate groups
    • Examples include adenosine monophosphate (AMP), adenosine diphosphate (ADP), and adenosine triphosphate (ATP)
    • Nucleotides are joined through 3'-5' phosphodiester linkages (covalent bonds)
    • Nucleic acids are directional, having 5' and 3' ends
    • Sequence of bases is not restricted, storing genetic information
    • Bases interact via hydrogen bonds in base pairing
    • A pairs with T (in DNA) or U (in RNA)
    • G pairs with C
    • Hydrogen bonds are individually weak
    • Base pairing is specific
    • DNA is a double helix
    • Two strands coil around the same axis
    • Approximately 10 base pairs per turn
    • Length of DNA expressed in base pairs (bp)
    • 1000 base pairs = 1 kilobase pair (1 kb)
    • Human genome has about 3.2 x 109 base pairs
    • DNA strands run in opposite directions; antiparallel
    • Chemical structure of double-stranded DNA (dsDNA)

    DNA Replication

    • DNA replication is semi-conservative
    • Each strand of DNA serves as a template for a new strand
    • Each daughter molecule contains one parental strand and one newly synthesized strand
    • DNA replication is bidirectional with multiple origins of replication
    • Replication is primed by short stretches of RNA
    • Replication is semidiscontinuous
    • DNA polymerase is needed for synthesis. It requires a template strand, dNTPs, and a primer with a free 3' end.
    • The leading strand is synthesized continuously, while the lagging strand is synthesized discontinuously in short fragments called Okazaki fragments
    • RNA primers are needed for lagging strand synthesis
    • Primase is DNA-directed RNA polymerase
    • DNA polymerase I removes RNA primers and fills the gaps
    • DNA ligase seals the nicks
    • DNA helicase unwinds the double helix ahead of the replication fork
    • Single-stranded DNA-binding proteins keep the two strands separate during replication
    • Topoisomerases relieve torsional stress in DNA during replication
    • Eukaryotic DNA polymerases have different functions (alpha, beta, delta, epsilon, gamma). Pol alpha inits. DNA synthesis. Pol beta is related to repair. Pol de/ep for lagging/leading strand elongation. Pol is involved in mitochondrial replication

    Eukaryotic Cell Cycle

    • The cell cycle includes G1, S, G2, and M phases
    • S phase includes DNA replication
    • G phases are gap phases for cell growth
    • M phase includes mitosis (chromosomes segregate)
    • Cells that have ceased division are in G0 phase

    Eukaryotic DNA Polymerases

    • Eukaryotic cells contain various DNA polymerases with specific functions
    • Pol α (alpha) initiates DNA synthesis
    • Pol β (beta) is related to repair
    • Pol δ/ε (delta, epsilon) synthesize the lagging/leading strands

    Telomeres

    • Telomeres are repetitive DNA stretches at chromosome ends, complexed with proteins
    • The telomere sequence in humans is (TTAGGG)n
    • Telomeres shorten with each cell division
    • Shortened telomeres prevent cell division
    • Cancer and stem cell telomeres do not shorten
    • Telomerase is a telomere maintenance enzyme that maintains telomere length

    DNA Damage

    • Environmental agents (chemicals, radiation) can damage DNA
    • Errors in normal cellular processes can cause DNA damage
    • Normal chemical changes (e.g., oxidation) can damage DNA
    • Mutations are heritable changes in the DNA sequence

    Medical Relevance

    • Telomeres shorten in normal somatic cells with each division
    • Once the telomeres get too short, cells can't divide anymore
    • Cancer and stem cells have high telomerase activity which allow continuous division
    • DNA synthesis can be inhibited by nucleoside analogs, such as AZT (zodovudine) – a modified sugar component
    • AZT is an anti-retroviral drug
    • Cytosine arabinoside is anti-cancer drug

    Causes of DNA Damage

    • Environmental agents like chemicals and radiation (e.g., UV radiation causes adjacent T's to dimerize)
    • Errors during normal cellular processes (e.g., incorrect nucleotide incorporation during DNA replication)
    • Normal chemical alterations (e.g., oxidation)

    Supercoils and Topoisomerases

    • As DNA unwinds during replication, supercoils form
    • DNA topoisomerases remove supercoils to prevent torsional stress
    • Certain antimicrobial and cancer drugs target topoisomerases as a mechanism of action

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    Description

    Test your knowledge on the structure and function of nucleic acids, including DNA and RNA. This quiz covers nucleotide composition, types of bases, and the significance of sugars and phosphates in nucleic acids. Explore the essential concepts of molecular biology that define genetic information.

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