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Questions and Answers
How does DNA polymerase contribute to the accuracy of DNA replication?
How does DNA polymerase contribute to the accuracy of DNA replication?
What distinguishes transcription from DNA replication?
What distinguishes transcription from DNA replication?
What are the main chemical constituents found in nucleic acids?
What are the main chemical constituents found in nucleic acids?
What do codons represent in the genetic code?
What do codons represent in the genetic code?
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How are tRNA molecules involved in translation?
How are tRNA molecules involved in translation?
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Which sugar is found in RNA?
Which sugar is found in RNA?
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What is the conformation of Z-DNA?
What is the conformation of Z-DNA?
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What is released during the formation of a polynucleotide chain from nucleotides?
What is released during the formation of a polynucleotide chain from nucleotides?
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What is the function of ultraviolet absorption at 260 nm in the context of nucleic acids?
What is the function of ultraviolet absorption at 260 nm in the context of nucleic acids?
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Which of the following statements about the stability of nucleic acids is true?
Which of the following statements about the stability of nucleic acids is true?
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What type of bases are derivatives of purines and pyrimidines found in nucleic acids?
What type of bases are derivatives of purines and pyrimidines found in nucleic acids?
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Which component is included in a nucleotide but not in a nucleoside?
Which component is included in a nucleotide but not in a nucleoside?
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What is primarily responsible for making the reaction thermodynamically favorable in nucleic acid processes?
What is primarily responsible for making the reaction thermodynamically favorable in nucleic acid processes?
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Which statement correctly describes the directionality of a polynucleotide chain?
Which statement correctly describes the directionality of a polynucleotide chain?
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What does the primary structure of nucleic acids refer to?
What does the primary structure of nucleic acids refer to?
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What indicates the type of nucleic acid when a sequence includes the letter T?
What indicates the type of nucleic acid when a sequence includes the letter T?
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In shorthand notation for nucleic acids, what does the notation 'ACGTT' represent?
In shorthand notation for nucleic acids, what does the notation 'ACGTT' represent?
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What is the main importance of a DNA sequence?
What is the main importance of a DNA sequence?
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What was the contribution of Avery et al. to our understanding of DNA?
What was the contribution of Avery et al. to our understanding of DNA?
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How did Hershey and Chase's experiments demonstrate DNA as the genetic material?
How did Hershey and Chase's experiments demonstrate DNA as the genetic material?
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What is the relationship between genes and primary structure in DNA?
What is the relationship between genes and primary structure in DNA?
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What type of supercoiling is predominantly found in most DNA molecules in vivo?
What type of supercoiling is predominantly found in most DNA molecules in vivo?
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Which of the following best describes the random coil structure of denatured single strands of nucleic acids?
Which of the following best describes the random coil structure of denatured single strands of nucleic acids?
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What are the high-order folding patterns of secondary structures in DNA referred to as?
What are the high-order folding patterns of secondary structures in DNA referred to as?
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Which enzyme complex is responsible for the replication of DNA?
Which enzyme complex is responsible for the replication of DNA?
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Which statement about DNA polymerase is true?
Which statement about DNA polymerase is true?
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What comprises an organism's genome?
What comprises an organism's genome?
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What is a characteristic feature of RNA molecules under native conditions?
What is a characteristic feature of RNA molecules under native conditions?
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How large is the human genome approximately?
How large is the human genome approximately?
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What happens to parental DNA strands during DNA replication?
What happens to parental DNA strands during DNA replication?
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Which structure is the primary structure of DNA or RNA primarily held together by?
Which structure is the primary structure of DNA or RNA primarily held together by?
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What type of bonding occurs between A-T base pairs in DNA?
What type of bonding occurs between A-T base pairs in DNA?
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Which form of DNA is most commonly found in biological systems?
Which form of DNA is most commonly found in biological systems?
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What does the rise of the helix refer to in DNA structure?
What does the rise of the helix refer to in DNA structure?
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What model of DNA replication is supported by the Meselson–Stahl experiment?
What model of DNA replication is supported by the Meselson–Stahl experiment?
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Which type of nucleic acid structure is characterized by a 2' hydroxyl group that prevents it from adopting a B form?
Which type of nucleic acid structure is characterized by a 2' hydroxyl group that prevents it from adopting a B form?
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How does the base pairing mechanism in DNA facilitate genetic replication?
How does the base pairing mechanism in DNA facilitate genetic replication?
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What is a significant feature of the Watson-Crick model of DNA?
What is a significant feature of the Watson-Crick model of DNA?
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Which characteristic is true for supercoiled DNA?
Which characteristic is true for supercoiled DNA?
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What is a major difference in the structural properties of A form and B form DNA?
What is a major difference in the structural properties of A form and B form DNA?
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What observable feature indicates a DNA molecule's degree of supercoiling?
What observable feature indicates a DNA molecule's degree of supercoiling?
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Study Notes
Biochemistry I - CHM219
- The course is Biochemistry I, CHM219, taught by Dr. Esra Aydemir
- Nucleic acids are a primary focus
- Nucleic acids are the principal organic constituents of cells and organisms along with proteins, carbohydrates, and lipids
- Nucleic acids are important for storage and transmission of biological information
- Chemically, nucleic acids consist of organic nitrogenous bases, a pentose sugar, and phosphate
- DNA (deoxyribonucleic acid) and RNA (ribonucleic acid) are two types of nucleic acids, differing in the sugar component.
- RNA contains the sugar ribose.
- DNA has deoxyribose.
- Both DNA and RNA are polynucleotides.
Nucleic Acid Structure
- The two types of heterocyclic bases (purines and pyrimidines) are derivatives of purine and pyrimidine
- Purines include adenine (A), guanine (G)
- Pyrimidines include cytosine (C), thymine (T), and uracil (U)
- Nucleosides are a nitrogenous base with a ribose
- Nucleotides are a nitrogenous base, a ribose, and a phosphate
- G, T, and U can partially tautomerize to enol forms.
- A and C tautomerize to imino forms.
Nucleic Acid Function
- UV absorption spectra of ribonucleotides (GMP, AMP, UMP, CMP) are used to measure nucleic acid concentrations
- Nucleic acids are metastable compounds favored to break down but take a long time unless catalyzed
- The nucleoside triphosphate is added to the growing chain
- The reaction is further favored by the hydrolysis of pyrophosphate to orthophosphate (inorganic phosphate (P₁))
DNA Replication
- DNA replication is the copying of both strands of a DNA duplex to produce two identical DNA duplexes
- DNA replication is accomplished by a complex of enzymes called the replisome
- Each strand acts as a template for a new, complementary strand
- When complete, there are two double-stranded daughter DNA molecules, each identical in sequence to the parent molecule
- Experimental evidence supports the semiconservative model.
DNA Structure
- The structure of B-DNA is based on molecular crystal studies.
- Local distortions exist and DNA molecules in nature can be slightly bent from the vertical axis.
- DNA in cells can vary in size and shape
- DNA can be circular or linear
- DNA can be relaxed or supercoiled
DNA Structure (Secondary and Tertiary)
- A and B are the secondary structures of nucleic acids (DNA)
- B DNA molecules have major and minor grooves
- Some DNA is in a Z conformation, a left handed helix with alternate purine/pyrimidine bases in a syn/anti conformation. Purines are syn, and pyrimidines are anti.
- DNA denaturation occurs when the double stranded DNA molecule separates into its single strands when heated over its melting temperature (Tm)
Manipulating DNA
- Recombinant DNA techniques study nucleic acids and their translation into proteins
- Recombinant DNA techniques include: Gene cloning, Chemical synthesis of oligonucleotides, DNA sequence analysis, Site-directed mutagenesis, Polymerase chain reaction (PCR)
- pBR322 is an example of an early cloning vector
- Techniques exist for chemical synthesis of oligonucleotides
- Sanger developed a method for DNA sequencing using 2',3'-dideoxynucelotides
Transcription and Translation
- Transcription is the copying of a DNA strand into a complementary RNA molecule
- Contrast to DNA replication, transcription uses ribonucleoside triphosphates (ATP, GTP, CTP, and UTP) rather than deoxyribonucleotide triphosphates to synthesize RNA
- Only one of the two DNA strands is copied
- The linear sequence of bases constitutes the protein-coding information in blocks of three nucleotide residues (codons)
- mRNA is transcribed from DNA; mRNA is translated into amino acid sequences
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Description
Test your knowledge on the fundamental concepts of nucleic acids, including DNA replication, transcription, and translation processes. This quiz covers key components such as codons, nucleotide structure, and the role of various molecules in genetic information processing.