Lab 2 - Phylogenetic Analysis

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Questions and Answers

What aspect makes phylogenetic trees considered scientific hypotheses?

  • They represent fixed relationships among species.
  • They are determined only by fossil records.
  • They are based solely on morphological traits.
  • They can be modified based on new data. (correct)

Which statement correctly defines phylogeny?

  • The study of fossil records.
  • The study of reproductive strategies of organisms.
  • The study of organism nomenclature.
  • The study of speciation and evolutionary history. (correct)

What is the term for the basal internode at the bottom of a phylogenetic tree?

  • Clade
  • Root (correct)
  • Branch
  • Node

Which statement about convergent evolution is true?

<p>Bats, birds, and bees have wings through convergent evolution. (B)</p> Signup and view all the answers

What can be inferred from more genetic differences between two species?

<p>They are distantly related. (D)</p> Signup and view all the answers

Which of the following statements applies to taxa A, B, C, D, and E regarding derived traits?

<p>Taxa E serves as the outgroup with only ancestral traits. (C)</p> Signup and view all the answers

Which statement regarding the relationships of mantids, beetles, and cockroaches is false?

<p>Mantids are closest to beetles than to cockroaches. (D)</p> Signup and view all the answers

Why are organisms B and C more closely related than B and A in the Boltidae group?

<p>B and C share more derived traits than B and A. (C)</p> Signup and view all the answers

In Exercise 3, what is the name of the software used to perform your analysis?

<p>MEGA (C)</p> Signup and view all the answers

Distantly related species have few genetic differences.

<p>False (B)</p> Signup and view all the answers

Flashcards

Phylogenetic Tree

A diagram showing the evolutionary relationships among various species or groups of organisms.

Phylogenetic Tree Hypothesis

A testable scientific model showing hypothesized evolutionary relationships based on available data, which can be adjusted as new data becomes available.

Convergent Evolution

Independent evolution of similar features in species from different lineages.

Rooted phylogenetic tree

Phylogenetic tree with a basal node representing the most recent common ancestor of all the included taxa.

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Outgroup

A group of organisms that is used as a reference point for comparison and is not directly related to the group being studied or in the same lineage.

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Derived Traits

Characteristics that appear in a lineage and are not present in common ancestors used, for example, for comparing relatedness.

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Monophyletic Group

A group of organisms that includes a common ancestor and all its descendants.

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Genetic Differences

Variations in the genetic material (DNA or RNA) between different organisms.

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Study Notes

Phylogenetic Trees

  • Phylogenetic trees are scientific hypotheses, modifiable with new data.
  • They represent evolutionary relationships among organisms.

Phylogeny

  • The study of evolutionary relationships among organisms.
  • Includes names of organisms, convergent evolution, speciation, and evolutionary history (not fossils).

Tree Terminology

  • Root: The basal internode at the bottom of the tree.
  • Branch: Represents lineages diverging from a common ancestor.
  • Node: Where two lineages diverge from a common ancestor.
  • Clade: A common ancestor and all of its descendants

Convergence

  • The wings of bats, birds, and bees evolved independently, not from a common ancestor.
  • This is an example of convergent evolution.

Genetic Differences and Relatedness

  • Greater genetic differences correspond to more distant evolutionary relationships between species.
  • Distantly related species, therefore, display more genetic difference.

Software for Analysis

  • MEGA was used for analysis in one of the exercises.

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