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Questions and Answers
What does species richness refer to in a microbial community?
What does species richness refer to in a microbial community?
How does nutrient availability affect species abundance in microbial habitats?
How does nutrient availability affect species abundance in microbial habitats?
What is typically observed in organic-rich soils regarding species richness?
What is typically observed in organic-rich soils regarding species richness?
What term describes the tiny local environment that microorganisms experience?
What term describes the tiny local environment that microorganisms experience?
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How do extreme environments typically affect microbial species richness?
How do extreme environments typically affect microbial species richness?
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What effect do the metabolic activities of a microbial community have on its habitat?
What effect do the metabolic activities of a microbial community have on its habitat?
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What is the typical challenge microorganisms face in their natural ecosystems?
What is the typical challenge microorganisms face in their natural ecosystems?
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In terms of microbial community structure, what is species abundance?
In terms of microbial community structure, what is species abundance?
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What is the primary reason for microorganisms to produce storage polymers?
What is the primary reason for microorganisms to produce storage polymers?
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What factor influences the competition among microorganisms in a habitat?
What factor influences the competition among microorganisms in a habitat?
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What is syntrophy in the context of microbial interactions?
What is syntrophy in the context of microbial interactions?
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How do surfaces impact microbial habitats?
How do surfaces impact microbial habitats?
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How does the growth rate of microorganisms in nature typically compare to laboratory conditions?
How does the growth rate of microorganisms in nature typically compare to laboratory conditions?
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What is a characteristic of planktonic cells compared to surface-associated cells?
What is a characteristic of planktonic cells compared to surface-associated cells?
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What role do surfaces play in microbial accumulation?
What role do surfaces play in microbial accumulation?
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In which environment can microbial accumulation on a surface reach significant thickness?
In which environment can microbial accumulation on a surface reach significant thickness?
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What is the primary characteristic of a mutualistic relationship?
What is the primary characteristic of a mutualistic relationship?
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Which of the following is NOT an example of a mutualistic relationship?
Which of the following is NOT an example of a mutualistic relationship?
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In a mutualistic relationship, how does the benefit to each partner influence their survival?
In a mutualistic relationship, how does the benefit to each partner influence their survival?
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Which of the following organism associations is identified as a type of mycorrhizae?
Which of the following organism associations is identified as a type of mycorrhizae?
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What is the primary difference between ectoparasites and endoparasites?
What is the primary difference between ectoparasites and endoparasites?
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What distinguishes commensalism from mutualism?
What distinguishes commensalism from mutualism?
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How do microbial populations, like those of Mycobacterium leprae, influence other species in commensal interactions?
How do microbial populations, like those of Mycobacterium leprae, influence other species in commensal interactions?
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Which type of parasitism involves a fungus making contact with a host and excreting toxic substances?
Which type of parasitism involves a fungus making contact with a host and excreting toxic substances?
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What characteristic feature distinguishes viruses as parasites?
What characteristic feature distinguishes viruses as parasites?
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Which organism is NOT typically considered a benefactor in a mutualistic relationship?
Which organism is NOT typically considered a benefactor in a mutualistic relationship?
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What is the main purpose of predation in a biological context?
What is the main purpose of predation in a biological context?
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What role does the dominant partner play in lichen symbiosis?
What role does the dominant partner play in lichen symbiosis?
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Which statement about Bdellovibrio is accurate?
Which statement about Bdellovibrio is accurate?
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What distinguishes proto-cooperation from mutualism?
What distinguishes proto-cooperation from mutualism?
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In syntrophism, what is a crucial aspect of the interaction between two microorganisms?
In syntrophism, what is a crucial aspect of the interaction between two microorganisms?
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Which of the following examples illustrates proto-cooperation?
Which of the following examples illustrates proto-cooperation?
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What is the primary benefit organisms gain from syntrophic interactions?
What is the primary benefit organisms gain from syntrophic interactions?
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Which metabolic process is dependent on interspecies hydrogen transfer in a methanogenic ecosystem?
Which metabolic process is dependent on interspecies hydrogen transfer in a methanogenic ecosystem?
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How do Lactobacillus arobinosus and Enterococcus faecalis support each other's growth?
How do Lactobacillus arobinosus and Enterococcus faecalis support each other's growth?
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What is the role of fermentative bacteria in a syntrophic relationship with methanogenic bacteria?
What is the role of fermentative bacteria in a syntrophic relationship with methanogenic bacteria?
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In proto-cooperation, what type of products do the interacting microbial populations create?
In proto-cooperation, what type of products do the interacting microbial populations create?
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Study Notes
Microbial Population vs Community
- Microbial population: One species living in association with others
- Microbial community: Consists of multiple microbial populations
Key Factors Influencing Microbial Species Richness and Abundance
- Species richness: Total number of different species present
- Species Abundance: Proportion of each species in the community
- Habitat conditions: Factors like available nutrients and prevailing conditions directly impact richness and abundance
Microbial Habitats
- Microorganisms thrive in diverse environments including common habitats like soil and water, extreme environments, and on/within other organisms.
- Each environment has defined physicochemical conditions shaped by the microbial community’s metabolic activities
Microenvironments
- Microbes experience a limited local environment called their microenvironment.
- Microenvironments can change rapidly within a single habitat.
Microbial Nutrient Levels & Growth Rates
- Microorganisms often face a “feast-or-famine” existence.
- Extended periods of exponential growth are rare in nature.
- Growth rates are usually lower than laboratory maximum rates.
Microbial Competition & Cooperation
- Competition for resources is intense with factors like nutrient uptake rate, metabolic rates, and growth rates impacting the outcome.
- Syntrophy: Microbes working together in metabolic transformations that are not possible individually.
- Examples of complementary metabolisms: Nitrifying bacteria and archaea.
Microbial Surfaces
- Surfaces provide important habitats offering:
- Greater nutrient access
- Protection from predation and environmental disturbances
- A way for cells to remain in favorable habitats, modify them, and avoid being washed away.
- Flow across a surface increases nutrient transport.
- Surfaces can be provided by other organisms or by nutrients like organic matter particles.
Surface Colonization
- Can be sparse, with microcolonies invisible to the naked eye.
- Can be so dense, that microbial accumulation is visible.
- Thickness can reach centimeters in extreme environments without grazing animals.
Mutualism (Positive Interaction)
- Mutualism is an obligatory relationship where both organisms benefit metabolically.
- Mutualists are specifically dependent on each other, and cannot be replaced by other species.
- Physical contact between organisms is required.
- Allows organisms to thrive in habitats they could not occupy alone.
- They act as a single organism.
Mutualism Examples
- Rhizobium-legume association: Nitrogen fixation.
- Mycorrhizae: Symbiosis between plant roots and fungal hyphae.
- Ectomycorrhizae, Endoomycorrhizae, and Ectendomycorrhizae.
- Lichens: Symbiosis between a fungus and alga.
- Fungus (mycobiont) is the dominant partner.
- Alga (phycobiont) can be cyanobacteria.
- Herbivore-microbial interactions: Intestinal bacteria in ruminants.
- Ruminococcus flavefaciens, Ruminococcus albus, and Fibrobacter succinogenes.
Commensalism (Positive Interaction)
- Commensalism is a unidirectional relationship where one organism benefits, and the other is unaffected.
- Examples:
- Disease-causing microbes opening lesions for other microbes.
- Staphylococcus: Some species are commensal skin flora, while others cause infections.
- Aspergillus: Lives in the gastrointestinal tract and can cause aspergillosis in immunocompromised individuals.
Proto-cooperation (Synergism) (Positive Interaction)
- Both populations benefit from each other.
- Allows for metabolic activities, with nutrient exchange between species.
- Association is NOT obligatory.
- Example 1: Desulfovibrio bacteria and Chromatium bacteria.
- Desulfovibrio supplies hydrogen sulfide and carbon dioxide.
- Chromatium provides sulfates and organic material.
- Example 2: Azotobacter and Cellulomonas.
- Azotobacter fixes nitrogen.
- Cellulomonas provides glucose.
Syntrophism (Positive Interaction)
- Special symbiosis between two metabolically different microorganisms.
- Cooperation through short-distance metabolite transfer.
- Both organisms can carry out a metabolic function that neither can alone
- The growth of one organism depends on or is improved by another's substrate.
- Example: Methanogenic ecosystem in sludge digester.
- Methanogenic bacteria produce methane using hydrogen transferred from fermentative bacteria.
- Anaerobic fermentative bacteria utilize carbohydrates for CO2 and H2, which Methanobacter uses for methane production.
- Example: Lactobacillus arobinosus and Enterococcus faecalis
- E.faecalis requires folic acid from L.arobinosus.
- L.arobinosus requires phenylalanine from E.faecalis
Parasitism (Negative Interaction)
- Characterized by a long-term physical or metabolic contact between host and parasite.
- Ectoparasites live outside the host cell, while endoparasites live inside.
- Examples:
- Fungi: Mycoparasitism (necrotrophic, biotrophic)
- Viruses: Obligate intracellular parasites with host specificity (bacteriophage, fungi, algae, protozoa).
- Bdellovibrio: Ectoparasite to gram-negative bacteria.
- Penetrates the host's outer membrane, entering the periplasmic space (not the cytoplasm).
Predation (Negative Interaction)
- One organism (predator) engulfs or attacks another (prey), resulting in the prey's death.
- Short-duration interactions.
- Examples:
- Protozoa-Bacteria in soil: Protozoa feed on bacteria.
- Predatory bacteria: Bdellovibrio, Vampirococcus, Daptobacter.
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Description
This quiz explores key concepts related to microbial populations and communities, including factors influencing species richness and abundance. Understand how microorganisms adapt to diverse habitats and examine the importance of microenvironments in their growth. Test your knowledge on microbial dynamics in various environments.