Podcast
Questions and Answers
What can paired reads yield evidence for?
What can paired reads yield evidence for?
- Single nucleotide polymorphisms
- Gene expression levels
- DNA replication errors
- Structural events (correct)
How is inferred insert size used to detect structural variants?
How is inferred insert size used to detect structural variants?
- Color by nucleotide sequence
- Analyze gene expression levels
- Identify single nucleotide polymorphisms
- Detect deletions and insertions (correct)
What do alignment coloring options help highlight based on inferred insert size and pair orientation?
What do alignment coloring options help highlight based on inferred insert size and pair orientation?
- DNA methylation patterns
- Single nucleotide polymorphisms
- Structural events (correct)
- Gene expression patterns
How does the orientation of paired reads reveal structural events?
How does the orientation of paired reads reveal structural events?
What can paired-end sequencing detect besides deletions and insertions?
What can paired-end sequencing detect besides deletions and insertions?
What type of genomic events can alignment coloring options help highlight?
What type of genomic events can alignment coloring options help highlight?
What type of information/data would be important to put in a cancer database?
What type of information/data would be important to put in a cancer database?
Which website provides information on cancer genomes?
Which website provides information on cancer genomes?
What is the purpose of the Integrative Genomics Viewer (IGV)?
What is the purpose of the Integrative Genomics Viewer (IGV)?
What does GDC stand for in the context of cancer research?
What does GDC stand for in the context of cancer research?
Why is information/data about the tumor important for a cancer database?
Why is information/data about the tumor important for a cancer database?
What type of information/data does ICGC DCC provide?
What type of information/data does ICGC DCC provide?
