Logical Symbols Table

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Questions and Answers

Which of the following characteristics differentiate Cyanobacteria from Chloroplasts?

  • Both perform photosynthesis using specialized membranes called thylakoids.
  • Both fix carbon dioxide ($CO_2$) to build cell material through the Calvin cycle.
  • Cyanobacteria and chloroplasts are primary producers in their respective environments.
  • Unlike chloroplasts, cyanobacteria contain peptidoglycan, and possess a gram-negative cell wall. (correct)

Certain cyanobacteria form specialized cells called heterocysts. What is the primary function of these cells?

  • To enhance motility in aquatic environments.
  • To fix nitrogen in an oxygen-free environment. (correct)
  • To carry out oxygenic photosynthesis more efficiently.
  • To provide structural support in filamentous species.

Prochlorococcus, a type of cyanobacteria, is known for its significant contribution to global photosynthesis. What proportion of the world's ocean photosynthesis is attributed to Prochlorococcus?

  • Approximately 50% (correct)
  • Approximately 25%
  • Approximately 10%
  • Approximately 75%

Which of the following statements about Cyanobacteria is incorrect, pertaining to their ecological roles and characteristics?

<p>Cyanobacteria are exclusively found in freshwater habitats and play a key role as secondary consumers. (B)</p> Signup and view all the answers

Which of the following characteristics is true of Firmicutes?

<p>They have relatively low guanine-cytosine (GC) content. (B)</p> Signup and view all the answers

Staphylococcus aureus is a Firmicute that is halotolerant. How does this characteristic influence its isolation in laboratory settings?

<p>It can be isolated using media with high concentrations of NaCl, such as mannitol salt agar. (D)</p> Signup and view all the answers

Bacillus and Clostridium are both endospore-forming Firmicutes, but differ in their requirement for oxygen. Select the statement that correctly describes their oxygen requirements.

<p>Bacillus is an aerobic endospore former, while Clostridium is a strictly anaerobic endospore former. (D)</p> Signup and view all the answers

Which of the following best explains the significance of Firmicutes being described as 'one of two phyla with gram-positive cell walls'?

<p>It emphasizes their unique cell wall structure, primarily composed of a thick peptidoglycan layer, setting them apart in bacterial classification. (B)</p> Signup and view all the answers

Myxococcus xanthus exhibits gliding motility, complex multicellular fruiting body formation under starvation, and differentiation into myxospores. What class of Proteobacteria does it belong to?

<p>Deltaproteobacteria (C)</p> Signup and view all the answers

Bdellovibrio bacteriovorus is a predatory bacterium that targets other bacteria. Which of the following mechanisms does it employ to achieve this?

<p>It penetrates the cell wall and multiplies in the periplasm, consuming the prey from within. (B)</p> Signup and view all the answers

Campylobacter jejuni is a microaerophilic, spirillum-shaped pathogen. What is commonly associated with Campylobacter jejuni?

<p>Frequently transmitted in undercooked chicken and causes gastroenteritis and bloody diarrhea. (B)</p> Signup and view all the answers

Which of the following correctly pairs a characteristic with its corresponding class of Proteobacteria, based on the information provided?

<p>Epsilonproteobacteria: Contains microaerophilic, spirillum-shaped pathogens associated with gastroenteritis. (B)</p> Signup and view all the answers

How does phylogenetic diversity differ from functional diversity in describing microbial communities?

<p>Phylogenetic diversity uses rRNA gene sequences to group microbes, while functional diversity groups them by the activities they carry out. (A)</p> Signup and view all the answers

What is the significance of metagenomic studies in understanding microbial diversity, especially when compared to traditional culture-based methods?

<p>Metagenomic studies allow for the identification and sequencing of most prokaryotes from environmental samples, including those that cannot be cultured in the lab. (B)</p> Signup and view all the answers

Given the two statements:

  1. Regardless of the classification method, bacteria will be categorized the same way.
  2. Two bacteria within the same genus may be categorized into different phyla.

Which is true?

<p>Neither (C)</p> Signup and view all the answers

Proteobacteria is a very large and metabolically diverse phylum. Considering their metabolic diversity, which of the following statements accurately describes their capabilities?

<p>Proteobacteria can be facultative organisms, capable of switching between different metabolic lifestyles. (D)</p> Signup and view all the answers

Consider Rhizobium leguminosarum's symbiotic relationship with legume plants. What specific role does the bacterium play in this symbiosis, and what does the plant provide in return?

<p>The bacterium fixes nitrogen into a bioavailable form for the plant, and the plant provides nutrients and a home for the bacterium. (D)</p> Signup and view all the answers

Rickettsia rickettsii is an obligate intracellular pathogen transmitted by insect bites. What condition does it cause, and what is its phylogenetic relationship?

<p>Causes Rocky Mountain spotted fever and is phylogenetically close to eukaryotic mitochondria. (C)</p> Signup and view all the answers

Neisseria gonorrhoeae is a pathogen that belongs to the Betaproteobacteria class. How does Neisseria mucosa differ, and what type of relationship does it have with the human body?

<p>Neisseria mucosa is non-pathogenic, commensal on the human body mucous membranes. (D)</p> Signup and view all the answers

Escherichia coli and Pseudomonas aeruginosa are examples of Gammaproteobacteria. Which characteristics differentiate these two bacteria?

<p>Escherichia coli ferments sugars, whereas Pseudomonas aeruginosa does not. (D)</p> Signup and view all the answers

Pseudomonas aeruginosa is known for its resistance to many antibiotics and disinfectants. How does this characteristic influence its role as a pathogen?

<p>It allows it to effectively colonize and compete with other bacteria in diverse environments. (B)</p> Signup and view all the answers

Which of the following statements correctly links the functional diversity observed in microbial communities to their phylogenetic diversity?

<p>Certain phylogenetic groups contribute unique functional roles, potentially leading to increased functional diversity. (B)</p> Signup and view all the answers

Which statement accurately describes the characteristics of Deltaproteobacteria?

<p>Deltaproteobacteria exhibit predation through invasion and replication within other bacteria, alongside complex social behaviors like fruiting body formation. (C)</p> Signup and view all the answers

Campylobacter jejuni can metabolize sulfur. How does this metabolic capability contribute to its survival or pathogenicity in specific environments?

<p>Metabolizing sulfur enables survival in anaerobic conditions. (D)</p> Signup and view all the answers

What critical roles do Firmicutes play in industrial and biotechnological applications?

<p>Key in generating biogas, offering sustainable energy alternative. (A)</p> Signup and view all the answers

How does understanding of the pathogenicity mechanisms of Staphylococcus aureus enhance its clinical treatment?

<p>It facilitates strategies that disrupt toxin production, diminishing disease extent. (D)</p> Signup and view all the answers

How do heterocyst formations in cyanobacteria assist in environmental sustainability and agriculture?

<p>Heterocysts perform biological nitrogen fixation. (D)</p> Signup and view all the answers

What evolutionary advantage does the unique predatory feature of Bdellovibrio bacteriovorus provide in its ecosystems?

<p>It contributes greatly to nutrient recycling. (B)</p> Signup and view all the answers

How does the gliding motility of Myxococcus xanthus boost its chances of survival and ecological performance?

<p>Myxococcus xanthus can explore new niches. (A)</p> Signup and view all the answers

In understanding microbial diversity through metagenomic studies, which constraint challenges the complete analysis of all species within a sample?

<p>The occurrence of uncharacterized genetic series hinders precise microbial detection. (A)</p> Signup and view all the answers

What specific methods could address issues preventing the isolation of nearly all prokaryotes using established lab protocols?

<p>Use of synthetic environments to mimic ecological interplay and improve growth. (B)</p> Signup and view all the answers

How could modern biotechnology exploit the facultative metabolism present in several proteobacteria for environmental management?

<p>Increasing the effectiveness of bioremediation to degrade broad pollutant concentrations (B)</p> Signup and view all the answers

For what reason does considering phylogenetic and functional diversity improve ecosystem evaluations?

<p>It allows comprehensive insight of system resilience and intercommunication, thus encouraging conservation strategies. (D)</p> Signup and view all the answers

How could insights gathered on endospore formation by Firmicutes lead to advances in applied settings?

<p>Establish novel techniques focused on eliminating dangerous bacteria from delicate gear and surfaces. (B)</p> Signup and view all the answers

What unique tactic might be used to control Campylobacter jejuni infections through a detailed grasp of its metabolic needs?

<p>Administer medications thwarting sulfur metabolism, decreasing gut survival. (D)</p> Signup and view all the answers

How does the parasitic lifestyle of Bdellovibrio bacteriovorus impact its ecological role and potential biotechnological applications?

<p>It positions them as potential biocontrol agents against Gram-negative bacterial infections. (A)</p> Signup and view all the answers

Considering the metabolic diversity of Proteobacteria, what advantage does being a facultative organism provide in fluctuating environmental conditions?

<p>The ability to switch between aerobic and anaerobic respiration based on oxygen availability. (B)</p> Signup and view all the answers

How do the multicellular fruiting bodies formed by Myxococcus xanthus contribute to its survival and propagation in nutrient-poor conditions?

<p>They enhance the efficiency of myxospore dispersal, improving survival rates. (C)</p> Signup and view all the answers

Given that metagenomic studies have identified numerous prokaryotic species that cannot be cultured in the lab, what are the implications for understanding the full scope of microbial diversity and function in ecosystems?

<p>The inability to culture these species limits our capacity to fully understand and harness their ecological roles and biotechnological potentials. (D)</p> Signup and view all the answers

Considering the ecological role of Cyanobacteria as primary producers, how does their capacity to perform oxygenic photosynthesis impact marine ecosystems, particularly in nutrient-poor environments?

<p>It supports complex food webs by converting carbon dioxide into organic compounds and releasing oxygen. (A)</p> Signup and view all the answers

Flashcards

Deltaproteobacteria

Class of Proteobacteria containing many species exhibiting strange behaviors like Myxobacteria.

Myxococcus xanthus

A species of Deltaproteobacteria known for gliding motility.

Gliding motility

The ability to move by gliding. Observed in Myxococcus xanthus.

Predatory (Deltaproteobacteria)

Releasing exoenzymes to break down other bacteria for nutrients.

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Fruiting bodies (Myxobacteria)

Complex multicellular structures formed by starved cells migrating together.

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Individual cell differentiation

Deltaproteobacteria that differentiate into myxospores for dispersal.

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Bdellovibrio bacteriovorus

Curved, highly motile predator of other proteobacteria and gram (-) bacteria.

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Bdellovibrio's periplasm replication

Enters the cell and replicates in the periplasm.

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Bdellovibrio as a parasite

Uses macromolecules obtained directly from a host organism. (Parasitic lifestyle).

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Epsilonproteobacteria

Class of proteobacteria that can metabolize sulfur.

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Campylobacter jejuni

A microaerophilic, spirillum-shaped pathogen.

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Phylogenetic diversity

1 of 2 ways microbes are grouped, it is based on evolutionary relationships using 16S rRNA sequence.

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Microbial diversity

16S rRNA gene sequence

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Functional diversity

Groups microbes based on the activities they carry out.

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Oxygenic phototrophy

Cyanobacteria is the only one has oxygenic phototrophy

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Metagenomic studies

Taking environmental samples and sequencing them.

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Most prokayotes

Cannot be cultured in the lab, some are known only from 16S sequences or metagenomic studies.

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Red dots = phyla

Phyla only known from metagemonome sequencing from diverse environmental samples.

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Tree of life

Includes 92 named bacterial phyla, 26 archaeal phyla, five eukaryotic super groups.

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Metabolic switching

A facultative organism can switch from one metabolic lifestyle to another.

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Proteobacteria

Major group.

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Alphaproteobacteria

Includes pathogens and non-pathogens. Rhizobium.

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Rhizobium leguminosarum

Forms root nodules on legume plants.

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Symbiotic legume

Fixes nitrogen into a bioavailable form.

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Rickettsia rickettsii

Obligate intracellular pathogen, carried by insects, causes Rocky Mountain spotted fever.

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Phylogenetic relationship

Closest relative to eukaryotic mitochondrion.

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Betaproteobacteria

Pathogens; some are non-pathogens.

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Neisseria mucosa

Non-pathogenic commensal of the human body on mucous membranes.

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Neisseria gonorrhoeae

Causes the STI gonorrhea.

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Gammaproteobacteria

Grows well in lab, important research models.

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Escherichia coli

Gram (-), facultative anaerobe, motile by means of flagella, ferments lactose.

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Escherichia coli

Indicator of fecal contamination.

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Pseudomonas aeruginosa

Gram (-), motile by means of flagella, opportunistic pathogen.

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Cyanobacteria

morphological diversity.

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Autotrophs

Harvest energy from light; primary producers.

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prochlorocoCCus

One of the most abundant organisms on earth.

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Firmicutes

One of two phyla with gram (+) cell walls.

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Lactic acid bacteria

Aerotolerant anaerobes (don't use O2) that generates from end-product of fermentation.

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Streptococcus pyogens

Causes Strep throat, Scarlet fever

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Staphylococcus aureus

Facultative anaerobe that forms grape like clusters on the skin.

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Halotolerent

Can be isolated using media with high NaCl, like mannitol salt agar

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Endospore

Bacillus are aerobic spore formers

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Endospore forming

Bacillus - aerobic endospore formers.

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Endospore forming

Clostridium- strictly anaerobic endospore formers.

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Study Notes

Lógica: Tabela de Símbolos Lógicos

  • $\land$: Conjunção, significa "e".
  • $\lor$: Disjunção, significa "ou".
  • $\lnot$: Negação, significa "não".
  • $\rightarrow$: Condicional, significa "se... então".
  • $\leftrightarrow$: Bicondicional, significa "se e somente se".
  • $\oplus$: Disjunção Exclusiva, significa "ou... ou".
  • $\therefore$: Conclusão, significa "portanto".
  • $\Leftrightarrow$: Equivalência Lógica, significa "é logicamente equivalente a".
  • $\Rightarrow$: Implicação Lógica, significa "implica logicamente em".
  • $\forall$: Quantificador Universal, significa "para todo".
  • $\exists$: Quantificador Existencial, significa "existe".
  • $\nexists$: Negação do Existencial, significa "não existe".
  • $\exists!$: Existência e Unicidade, significa "existe um único".
  • $\in$: Pertinência, significa "pertence a".
  • $\notin$: Não Pertinência, significa "não pertence a".
  • $\subset$: Inclusão, significa "está contido em".
  • $\not\subset$: Não Inclusão, significa "não está contido em".
  • $\subseteq$: Inclusão Ampla, significa "está contido ou é igual a".
  • $\not\subseteq$: Não Inclusão Ampla, significa "não está contido nem é igual a".
  • $\supset$: Contém, significa "contém".
  • $\not\supset$: Não Contém, significa "não contém".
  • $\supseteq$: Contém Ampla, significa "contém ou é igual a".
  • $\not\supseteq$: Não Contém Ampla, significa "não contém nem é igual a".
  • {}: Conjunto, significa "o conjunto".
  • $\varnothing$: Conjunto Vazio, significa "conjunto vazio".
  • $\mathbb{N}$: Naturais, significa "o conjunto dos números naturais".
  • $\mathbb{Z}$: Inteiros, significa "o conjunto dos números inteiros".
  • $\mathbb{Q}$: Racionais, significa "o conjunto dos números racionais".
  • $\mathbb{R}$: Reais, significa "o conjunto dos números reais".
  • $\mathbb{C}$: Complexos, significa "o conjunto dos números complexos".
  • $\mathbb{P}$: Primos, significa "o conjunto dos números primos".
  • $|x|$: Valor Absoluto, significa "o valor absoluto de x".
  • $n!$: Fatorial, significa "n fatorial".
  • $\sum_{i=1}^{n} x_i$: Somatório, significa "somatório de $x_i$ de 1 até n".
  • $\prod_{i=1}^{n} x_i$: Produtório, significa "produtório de $x_i$ de 1 até n".
  • $\lim_{x \to a} f(x)$: Limite, significa "o limite de f(x) quando x se aproxima de a".
  • $\frac{dy}{dx}$: Derivada, significa "a derivada de y em relação a x".
  • $\int f(x) , dx$: Integral, significa "a integral de f(x) em relação a x".
  • $\infty$: Infinito, significa "infinito".
  • $\neg p$: Negação de p, significa "não p".
  • $p \land q$: Conjunção de p e q, significa "p e q".
  • $p \lor q$: Disjunção de p e q, significa "p ou q".
  • $p \rightarrow q$: Condicional de p e q, significa "Se p, então q".
  • $p \leftrightarrow q$: Bicondicional de p e q, significa "p se e somente se q".

Lógica: Falácias Lógicas

  • Ad hominem
  • Apelo à autoridade
  • Espantalho
  • Falso dilema
  • Derrapagem
  • Inversão do ónus da prova
  • Apelo à emoção
  • Banda
  • Generalização apressada
  • Falsa causa
  • Falácia da composição
  • Falácia da divisão

Fonction Logarithme Népérien: Définition

  • La fonction logarithme népérien (ln) est définie sur $]0; +\infty[$.
  • C'est la primitive de $x \mapsto \frac{1}{x}$ qui s'annule en 1.
  • $ln(x)$ est dérivable sur $]0; +\infty[$, et $(ln(x))' = \frac{1}{x}$.
  • $ln(x)$ est continue sur $]0; +\infty[$.
  • $ln(1) = 0$.

Fonction Logarithme Népérien: Propriétés Algébriques

  • Pour $a, b > 0$ et $n \in \mathbb{Z}$:
    • $ln(ab) = ln(a) + ln(b)$
    • $ln(\frac{1}{a}) = -ln(a)$
    • $ln(\frac{a}{b}) = ln(a) - ln(b)$
    • $ln(a^n) = n \cdot ln(a)$
    • $ln(\sqrt{a}) = \frac{1}{2}ln(a)$

Fonction Logarithme Népérien: Étude

  • La fonction ln est strictement croissante sur $]0; +\infty[$.
  • $\lim_{x \to +\infty} ln(x) = +\infty$
  • $\lim_{x \to 0} ln(x) = -\infty$
  • $\lim_{h \to 0} \frac{ln(a+h) - ln(a)}{h} = \frac{1}{a}$ pour $a > 0$.
  • $\lim_{x \to 0} \frac{ln(1+x)}{x} = 1$
  • $\lim_{x \to +\infty} \frac{ln(x)}{x} = 0$
  • $\lim_{x \to +\infty} \frac{ln(x)}{x^n} = 0$ pour $n \in \mathbb{N}^*$.
  • $\lim_{x \to 0} x \cdot ln(x) = 0$

Fonction Logarithme Népérien: $x \mapsto ln(u(x))$

  • Si u est strictement positive et dérivable sur I, alors $x \mapsto ln(u(x))$ est dérivable sur I.
  • $(ln(u(x)))' = \frac{u'(x)}{u(x)}$
  • $f(x) = ln(2x + 3)$ est définie et dérivable sur $]-\frac{3}{2}; +\infty[$, et $f'(x) = \frac{2}{2x+3}$.
  • $g(x) = ln(x^2 + 1)$ est définie et dérivable sur $\mathbb{R}$, et $g'(x) = \frac{2x}{x^2+1}$.

Static Electricity: Charging by Friction

  • Involves the triboelectric series, which lists materials by their tendency to become positively or negatively charged when rubbed together.
  • Materials higher on the series become more positive when rubbed with those below.
  • Electrons are transferred between objects; one becomes positive, the other negative.
  • Best results occur with insulators. Also known as triboelectric charging.
  • Charge depends on a material's affinity for electrons.
  • Glass becomes positive and silk negative when rubbed together.

Static Electricity: Charging by Conduction

  • A charged object directly contacts a neutral object.
  • Electrons transfer between objects until they have the same charge.
  • Requires contact; works best with conductors.
  • A negatively charged rod gives electrons to a neutral metal sphere, charging it negatively.

Static Electricity: Charging by Induction

  • A charged object is brought near a neutral object (no contact).
  • Polarization occurs: electrons in the neutral object shift.
  • The neutral object is grounded allowing electrons to flow in or out.
  • Ground is removed, resulting in the neutral object having the opposite charge of the charged object.
  • A negatively charged rod near a neutral sphere repels electrons, grounding removes excess electrons, and the sphere becomes positively charged.

Teorema de Green: Generalidades

  • Relaciona una integral de línea alrededor de una curva plana simple $C$ con una integral doble sobre la región $D$ limitada por $C$.
  • Es la versión bidimensional del teorema de Stokes.

Teorema de Green: Enunciado Formal

  • Sea $C$ una curva plana, cerrada, simple y positivamente orientada, diferenciable a trozos, y sea $D$ la región limitada por $C$.
  • Si $P$ y $Q$ tienen derivadas parciales continuas en una región abierta que contiene a $D$, entonces $\oint_C P dx + Q dy = \iint_D (\frac{\partial Q}{\partial x} - \frac{\partial P}{\partial y}) dA$
  • La integral de línea se recorre en sentido antihorario alrededor de $C$.

Teorema de Green: Demostración

  • $D$ se puede expresar como región de tipo I: $D = {(x, y) | a \le x \le b, g_1(x) \le y \le g_2(x) }$.
  • $D$ se puede expresar como región de tipo II: $D = {(x, y) | c \le y \le d, h_1(y) \le x \le h_2(y) }$.
  • $\iint_D (\frac{\partial Q}{\partial x} - \frac{\partial P}{\partial y}) dA = \iint_D \frac{\partial Q}{\partial x} dA - \iint_D \frac{\partial P}{\partial y} dA$.
  • $\iint_D \frac{\partial P}{\partial y} dA = - \oint_C P(x, y) dx$.
  • $\iint_D \frac{\partial Q}{\partial x} dA = \oint_C Q(x, y) dy$.

Chemical Kinetics: Reaction Rate

  • For the general reaction $ aA + bB \rightarrow cC + dD $
  • The rate can be expressed as: $Rate = -\frac{1}{a} \frac{d[A]}{dt} = -\frac{1}{b} \frac{d[B]}{dt} = \frac{1}{c} \frac{d[C]}{dt} = \frac{1}{d} \frac{d[D]}{dt} $

Chemical Kinetics: Rate Law

  • For the general reaction $ aA + bB \rightarrow cC + dD $
  • The rate law can be expressed as: $Rate = k[A]^x [B]^y$
    • k is the rate constant
    • x is the order with respect to A
    • y is the order with respect to B
    • x+y is the overall order of reaction

Chemical Kinetics: Integrated Rate Law

  • Zero Order: $A \rightarrow products$

    • Rate = k
    • $[A]_t = -kt + [A]_0$
    • $t_{1/2} = \frac{[A]_0}{2k}$
  • First Order: $A \rightarrow products$

    • Rate = k[A]
    • $ln[A]_t = -kt + ln[A]_0$
    • $t_{1/2} = \frac{0.693}{k}$
  • Second Order: $A \rightarrow products$

    • Rate = k[A]^2
    • $\frac{1}{[A]_t} = kt + \frac{1}{[A]_0}$
    • $t_{1/2} = \frac{1}{k[A]_0}$

Chemical Kinetics: Half-Life

  • Time required for the reactant concentration to decrease to one half of its initial value.

Chemical Kinetics: Arrhenius Equation

  • Arrhenius Equation: $k = Ae^{\frac{-E_a}{RT}}$
    • $E_a$ is the activation energy
    • R is the gas constant (8.314 J/mol·K)
    • A is the frequency factor
    • $ln(k) = \frac{-E_a}{R} (\frac{1}{T}) + ln(A)$

Chemical Kinetics: Catalysis

  • Catalyst: substance that increases the rate of a chemical reaction without being consumed.
  • Homogeneous catalyst: present in the same phase as the reactants.
  • Heterogeneous catalyst: present in a different phase than the reactants.

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