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Questions and Answers
What type of proteins interact tightly with membranes through hydrophobic interactions?
What type of proteins interact tightly with membranes through hydrophobic interactions?
- Glycoproteins
- Peripheral proteins
- Integral proteins (correct)
- Lipoproteins
Which treatment can separate integral proteins from membranes?
Which treatment can separate integral proteins from membranes?
- Salt solutions
- Detergents (correct)
- Alcohol
- Heat
What role do the polar head groups of detergent molecules play in solubilizing membrane proteins?
What role do the polar head groups of detergent molecules play in solubilizing membrane proteins?
- They enable the protein to maintain its structure.
- They help proteins bond stronger to membranes.
- They increase the protein's hydrophobicity.
- They render the detergent-protein complex soluble in water. (correct)
Approximately what percentage of all proteins do membrane proteins comprise?
Approximately what percentage of all proteins do membrane proteins comprise?
Why is the crystallization of membrane proteins limited?
Why is the crystallization of membrane proteins limited?
Which property allows integral proteins to span the lipid bilayer?
Which property allows integral proteins to span the lipid bilayer?
What characterizes the cytoplasmic c-terminal domain of glycophorin A?
What characterizes the cytoplasmic c-terminal domain of glycophorin A?
How many carbohydrate chains are present in the N-terminal domain of glycophorin A?
How many carbohydrate chains are present in the N-terminal domain of glycophorin A?
What type of protein is glycophorin A classified as?
What type of protein is glycophorin A classified as?
What role do α helices play in the function of transmembrane proteins?
What role do α helices play in the function of transmembrane proteins?
What is the primary function of triacylglycerols in the body?
What is the primary function of triacylglycerols in the body?
Why do fats yield more energy per unit mass compared to carbohydrates or proteins?
Why do fats yield more energy per unit mass compared to carbohydrates or proteins?
What percentage of fat content is typical in normal human males?
What percentage of fat content is typical in normal human males?
Which lipid component is mainly responsible for forming biological membranes?
Which lipid component is mainly responsible for forming biological membranes?
How long can the body survive on its glycogen supply during energy need?
How long can the body survive on its glycogen supply during energy need?
What accurately describes the structure of integral membrane proteins?
What accurately describes the structure of integral membrane proteins?
What is the function of the retinal in bacteriorhodopsin?
What is the function of the retinal in bacteriorhodopsin?
How does the fluid mosaic model describe the arrangement of membrane proteins?
How does the fluid mosaic model describe the arrangement of membrane proteins?
What mechanism helps mediates vesicle fusion with target membranes?
What mechanism helps mediates vesicle fusion with target membranes?
Which feature of biological membranes is suggested by the fluidity of artificial lipid bilayers?
Which feature of biological membranes is suggested by the fluidity of artificial lipid bilayers?
What is the primary function of bacteriorhodopsin in cells?
What is the primary function of bacteriorhodopsin in cells?
What best describes the dynamic arrangement of membrane lipids and proteins?
What best describes the dynamic arrangement of membrane lipids and proteins?
What does the secretory pathway describe?
What does the secretory pathway describe?
What characterizes saturated fatty acids?
What characterizes saturated fatty acids?
Which fatty acid configurations do double bonds in unsaturated fatty acids typically have?
Which fatty acid configurations do double bonds in unsaturated fatty acids typically have?
What is the molecular composition of triacylglycerols?
What is the molecular composition of triacylglycerols?
Which type of fatty acids typically has a higher melting point?
Which type of fatty acids typically has a higher melting point?
What property is influenced by the arrangement of fatty acids in triacylglycerols?
What property is influenced by the arrangement of fatty acids in triacylglycerols?
What happens to the lipid bilayer when it cools below its transition temperature?
What happens to the lipid bilayer when it cools below its transition temperature?
What property of the lipid bilayer contributes to its classification as a two-dimensional fluid?
What property of the lipid bilayer contributes to its classification as a two-dimensional fluid?
What kind of fatty acids are typically present in higher plants and animals?
What kind of fatty acids are typically present in higher plants and animals?
How does the viscosity of the bilayer change as one moves closer to the lipid head groups?
How does the viscosity of the bilayer change as one moves closer to the lipid head groups?
How do polysaturated fatty acids compare to saturated fatty acids in terms of packing efficiency?
How do polysaturated fatty acids compare to saturated fatty acids in terms of packing efficiency?
Why do most fatty acids have an even number of carbon atoms?
Why do most fatty acids have an even number of carbon atoms?
What description best fits the state of lipids in a lipid bilayer above the transition temperature?
What description best fits the state of lipids in a lipid bilayer above the transition temperature?
What is the characteristic behavior of the hydrophobic tails of lipids in a bilayer?
What is the characteristic behavior of the hydrophobic tails of lipids in a bilayer?
What is a primary characteristic of triacylglycerols?
What is a primary characteristic of triacylglycerols?
What role do molecular dynamic simulations play in understanding the lipid bilayer?
What role do molecular dynamic simulations play in understanding the lipid bilayer?
What is the viscosity of the lipid bilayer compared to light machine oil?
What is the viscosity of the lipid bilayer compared to light machine oil?
What best describes the movement of lipids in the lipid bilayer?
What best describes the movement of lipids in the lipid bilayer?
Flashcards
Integral membrane proteins
Integral membrane proteins
Proteins that are tightly embedded within the lipid bilayer of a cell membrane.
Hydrophobic interactions
Hydrophobic interactions
Interactions between the nonpolar, hydrophobic regions of integral membrane proteins and the hydrophobic tails of lipids in the membrane.
Detergent
Detergent
A type of molecule that disrupts or breaks down the structure of cell membranes.
Solubilization of membrane proteins
Solubilization of membrane proteins
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Crystallization of membrane proteins
Crystallization of membrane proteins
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What are triacylglycerols?
What are triacylglycerols?
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What makes plant oils different from animal fats?
What makes plant oils different from animal fats?
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Why are Fats good for storing energy?
Why are Fats good for storing energy?
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What are adipocytes?
What are adipocytes?
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What are glycerophospholipids?
What are glycerophospholipids?
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Integral protein amphiphilicity
Integral protein amphiphilicity
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Asymmetrical orientation of integral proteins
Asymmetrical orientation of integral proteins
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Glycophorin A domains
Glycophorin A domains
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Alpha-helices in transmembrane proteins
Alpha-helices in transmembrane proteins
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Requirements for transmembrane protein passage
Requirements for transmembrane protein passage
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Hormones
Hormones
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Signal Transduction
Signal Transduction
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Fatty Acids
Fatty Acids
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Unsaturated Fatty Acids
Unsaturated Fatty Acids
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Saturated Fatty Acids
Saturated Fatty Acids
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Cis configuration
Cis configuration
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Polyunsaturated Fatty Acids
Polyunsaturated Fatty Acids
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Triacylglycerols (Triglycerides)
Triacylglycerols (Triglycerides)
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Glycerol
Glycerol
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Water
Water
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Diffusion in Phospholipid Bilayer
Diffusion in Phospholipid Bilayer
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Fluidlike Properties of Lipid Bilayers
Fluidlike Properties of Lipid Bilayers
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Viscosity of Lipid Bilayer
Viscosity of Lipid Bilayer
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Viscosity Near Head Groups
Viscosity Near Head Groups
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Flexibility of Hydrophobic Tails
Flexibility of Hydrophobic Tails
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Temperature Dependence of Bilayer Fluidity
Temperature Dependence of Bilayer Fluidity
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Liquid-crystal State of Lipid Bilayer
Liquid-crystal State of Lipid Bilayer
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Gel-like State of Lipid Bilayer
Gel-like State of Lipid Bilayer
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Transmembrane Protein Segments
Transmembrane Protein Segments
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Hydropathy Index
Hydropathy Index
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Bacteriorhodopsin
Bacteriorhodopsin
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Secretory Pathway
Secretory Pathway
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SNAREs
SNAREs
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Fluid Mosaic Model
Fluid Mosaic Model
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Lateral Diffusion
Lateral Diffusion
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Lipid Rafts
Lipid Rafts
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Study Notes
Lipids
- Lipids are distinguished by their high solubility in non-polar solvents and low solubility in water (Hâ‚‚O).
- Lipids are a diverse group of compounds including fats, oils, waxes, some vitamins, hormones, and most non-protein components of membranes.
- Lipids are amphipathic molecules, possessing both polar and nonpolar regions.
- Lipids serve as major components of biological membranes, storing energy, and acting as hormones.
- They are major components of biological membranes, define the basic unit of life (cell) and subcellular compartments (eukaryotes), and include cholesterol.
- Lipids are a major form of stored energy in biological systems; complete oxidation of lipids generates more energy than sugars.
- Lipids act as hormones, enabling signal transduction (communication) between cells.
Lipid Classification - Key Concepts 1
- The length and saturation of a fatty acid chain define its physical properties.
- Triacylglycerols and glycerophospholipids contain fatty acids esterified to glycerol.
- Sphingolipids resemble glycerophospholipids but may have large carbohydrate groups.
- Steroids, isoprenoids, and other lipids have a wide variety of functions.
Fatty Acids - Properties
- Fatty acids are carboxylic acids with long-chain hydrocarbon side groups.
- In higher plants and animals, 16- and 18-carbon fatty acids (palmitic, oleic, linoleic, and stearic acids) are dominant.
- Most fatty acids have an even number of carbon atoms because they arise from the concatenation of Câ‚‚ units.
- Saturated fatty acids lack double bonds, while unsaturated fatty acids have one or more double bonds (mostly cis configuration).
- Polyunsaturated fatty acids have multiple double bonds.
Saturated vs. Unsaturated Fatty Acids
- Saturated fatty acids (no double bonds) pack together efficiently, resulting in higher melting points and decreased fluidity.
- Unsaturated fatty acids (containing double bonds) pack less efficiently, leading to lower melting points and increased fluidity.
- Cis double bonds create bends in the fatty acid chain, further decreasing the melting point.
Triacylglycerols
- Triacylglycerols (triglycerides) are glycerol molecules esterified to three fatty acids.
- They are nonpolar and water-insoluble substances functioning as energy reservoirs.
- Triacylglycerols differ based on the identity and placement of their three fatty acid residues.
Glycerophospholipids
- Glycerophospholipids (phosphoglycerides) are major components of biological membranes.
- They consist of glycerol-3-phosphate with fatty acids esterified at positions C1 and C2.
- A phosphate group is attached to a polar head group (X), making them amphiphilic.
- Phosphatidic acids are the simplest glycerophospholipids.
- Common glycerophospholipid head groups include choline, ethanolamine, serine, and inositol.
Sphingolipids
- Sphingolipids are major membrane components, derived from the amino alcohol sphingosine.
- Ceramides are the parent compounds of sphingomyelins, cerebrosides, and gangliosides.
- Sphingomyelins contain a phosphocholine head group.
- Cerebrosides contain a single sugar residue (e.g., glucose or galactose).
- Gangliosides are complex glycosphingolipids with multiple sugar residues, including sialic acid.
Steroids
- Steroids are derivatives of cyclopentanoperhydrophenanthrene and have four fused non-planar rings.
- Cholesterol is the most abundant steroid in animals, classified as a sterol due to its C3-OH group.
- It is a major component of animal plasma membranes (~30-40 mol%).
- The polar OH group of cholesterol gives it a weak amphiphilic character.
- Cholesterol is important for membrane fluidity.
- Steroids undergo esterification with long-chain fatty acids, forming cholesteryl esters like cholesteryl stearate.
Steroid Hormones
- Steroid hormones, derived from cholesterol, regulate various physiological processes.
- These are classified according to their function:
- Glucocorticoids (e.g., cortisol): affect carbohydrate, protein, and lipid metabolism.
- Mineralocorticoids (e.g., aldosterone): regulate salt and water balance.
- Androgens (e.g., testosterone): affect sexual development.
- Estrogens (e.g., estradiol): affect sexual development and function.
Membrane Structure
- Certain amphiphilic molecules form bilayers.
- Bilayers are fluid structures where lipids diffuse laterally.
- The fluid mosaic model describes the dynamic arrangement and interactions of membrane lipids and proteins.
- The membrane skeleton provides shape and flexibility.
- Lipids are not distributed uniformly, and can form rafts.
- The secretory pathway depicts the membrane and secreted protein transmembrane passage.
- Different types of coated vesicles transport proteins.
- SNAREs bring membranes together mediating vesicle fusion.
Integral Membrane Proteins
- Integral membrane proteins have transmembrane regions consisting of alpha-helixes or beta-barrels.
- They are tightly associated with the membrane and are sometimes embedded into the membrane.
- Lipid-linked proteins are covalently attached to prenyl groups, fatty acyl groups, or glycosylphosphatidylinositol.
- Peripheral membrane proteins interact noncovalently with other proteins or lipids.
Bilayer Formation and Properties
- Bilayer formation, driven by the hydrophobic effect, involves amphiphilic molecules arranging with their hydrophobic tails facing each other and their hydrophilic heads facing the water.
- Lipid bilayers have fluidlike properties, meaning lipids can diffuse laterally within the membrane. This lateral diffusion is rapid.
- Transverse diffusion (flip-flop) is extremely slow.
Membrane Skeleton
- The membrane skeleton underlies the plasma membrane creating a dense, irregular network of proteins (spectrin, ankyrin, actin, etc).
- Spectrin: a major component of the meshwork, consists of 2 polypeptide chains with similar structure, providing flexibility while contributing to cell shape.
- Ankyrin: anchors the membrane skeleton to the integral membrane proteins, typically ion channels.
- This structural meshwork gives the cell its shape.
Gates and Fences Model
- The interaction of integral membrane components with cytoskeletal proteins explains how proteins can exhibit various degrees of membrane mobility.
- Integral proteins interacting with the cytoskeleton remain immobile.
- Other integral proteins can rotate or diffuse.
- Cytoskeletal components can create "gates" allowing proteins to move.
Other techniques
- Fluorescence Recovery After Photobleaching (FRAP): used for measuring lipid and protein diffusion within cellular membranes.
- Photobleaching: involves temporarily inactivating a fluorescent molecule utilizing a focused laser beam.
- The rate at which the bleached area recovers fluorescence indicates the rate of diffusion.
Diseases
- Disorders of ganglioside breakdown (e.g., Tay-Sachs disease) can cause serious neurological deterioration.
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