Podcast
Questions and Answers
Which characteristic is common to all microorganisms?
Which characteristic is common to all microorganisms?
- Ability to perform photosynthesis
- Small size (correct)
- Large size, visible to the naked eye
- Complex cellular structures
Which of the following is NOT an example of a visible organism studied in microbiology?
Which of the following is NOT an example of a visible organism studied in microbiology?
- Epulopiscium fishelsoni
- Mushroom
- Bread mold
- Virus (correct)
Which of these fields is considered a pure branch of microbiology?
Which of these fields is considered a pure branch of microbiology?
- Environmental microbiology
- Medical microbiology
- Bacteriology (correct)
- Industrial microbiology
Which best describes the contribution of Anton Van Leeuwenhoek to microbiology?
Which best describes the contribution of Anton Van Leeuwenhoek to microbiology?
What was the main flaw in John Needham’s experiment that supported spontaneous generation?
What was the main flaw in John Needham’s experiment that supported spontaneous generation?
What key discovery did Louis Pasteur make that helped disprove spontaneous generation?
What key discovery did Louis Pasteur make that helped disprove spontaneous generation?
What is the first step in Koch's postulates for proving the role of a microorganism in a disease?
What is the first step in Koch's postulates for proving the role of a microorganism in a disease?
What key improvement did Richard Petri introduce to bacterial cultivation?
What key improvement did Richard Petri introduce to bacterial cultivation?
What is the primary purpose of sterilization?
What is the primary purpose of sterilization?
Which of the following is NOT a method of sterilization?
Which of the following is NOT a method of sterilization?
What is the core principle of cell theory?
What is the core principle of cell theory?
What significant development occurred during the era of molecular microbiology?
What significant development occurred during the era of molecular microbiology?
Which of the following describes prokaryotic cells?
Which of the following describes prokaryotic cells?
Which structure aids bacteria in attachment to surfaces?
Which structure aids bacteria in attachment to surfaces?
What is the role of plasmids in prokaryotic cells?
What is the role of plasmids in prokaryotic cells?
How does binary fission facilitate reproduction in prokaryotes?
How does binary fission facilitate reproduction in prokaryotes?
What role do bacteriophages play in transduction?
What role do bacteriophages play in transduction?
The thickness of what structure differentiates Gram-positive and Gram-negative bacteria?
The thickness of what structure differentiates Gram-positive and Gram-negative bacteria?
What is nitrogen fixation?
What is nitrogen fixation?
What role do hydrocarbon-degrading bacteria play in the environment?
What role do hydrocarbon-degrading bacteria play in the environment?
What indicates fecal contamination when determining the purity of water?
What indicates fecal contamination when determining the purity of water?
Which bacterial genus is used to produce lactic acid through fermentation in the food industry?
Which bacterial genus is used to produce lactic acid through fermentation in the food industry?
Which bacterium produces a toxin that causes botulism?
Which bacterium produces a toxin that causes botulism?
What is the main role of bacteria in the production of antibiotics?
What is the main role of bacteria in the production of antibiotics?
How are bacteria used in vaccine development?
How are bacteria used in vaccine development?
What role do some bacteria play in cancer treatment?
What role do some bacteria play in cancer treatment?
What characteristic distinguishes fungi from plants and animals?
What characteristic distinguishes fungi from plants and animals?
How do fungi contribute to nutrient cycling in ecosystems?
How do fungi contribute to nutrient cycling in ecosystems?
What is the role of mycorrhizae in plant nutrition?
What is the role of mycorrhizae in plant nutrition?
What beneficial compounds do fungi produce that are used in medicine?
What beneficial compounds do fungi produce that are used in medicine?
What role do fungi play in water ecosystems?
What role do fungi play in water ecosystems?
What term describes viruses as they can only replicate inside a host cell?
What term describes viruses as they can only replicate inside a host cell?
What is the function of viral envelope proteins?
What is the function of viral envelope proteins?
What is the purpose of the viral tegument?
What is the purpose of the viral tegument?
What is the distinction between the lytic and lysogenic cycles in viral replication?
What is the distinction between the lytic and lysogenic cycles in viral replication?
How do viruses contribute to nutrient cycling in soil environments?
How do viruses contribute to nutrient cycling in soil environments?
How are bacteriophages used in the food industry?
How are bacteriophages used in the food industry?
Which disease is caused by protozoa that are transmitted by Anopheles mosquitoes?
Which disease is caused by protozoa that are transmitted by Anopheles mosquitoes?
How do algae contribute to the formation of limestone?
How do algae contribute to the formation of limestone?
Flashcards
What is Microbiology?
What is Microbiology?
The study of microscopic organisms, structure, how they live, multiply, feed and their relationship with other organisms, man and plant.
Microorganisms Include:
Microorganisms Include:
Bacteria, fungi, viruses, protozoa, algae and slime molds.
Bacteriology is?
Bacteriology is?
The study of bacteria.
What is Mycology?
What is Mycology?
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Virology is?
Virology is?
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Protozoology is?
Protozoology is?
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Algology/Phycology
Algology/Phycology
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Parasitology
Parasitology
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Immunology
Immunology
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Medical microbiology
Medical microbiology
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Industrial microbiology
Industrial microbiology
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Environmental microbiology
Environmental microbiology
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Food microbiology
Food microbiology
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Pharmaceutical microbiology
Pharmaceutical microbiology
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Public health microbiology
Public health microbiology
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Spontaneous generation
Spontaneous generation
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Germ Theory
Germ Theory
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Sterilization
Sterilization
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Viral Envelope
Viral Envelope
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Envelope Proteins
Envelope Proteins
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Nucleocapsid Function
Nucleocapsid Function
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Viral Classification
Viral Classification
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Virus Replication: Attachment
Virus Replication: Attachment
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Virus Replication: Maturation
Virus Replication: Maturation
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Lytic Cycle
Lytic Cycle
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Lysogenic Cycle
Lysogenic Cycle
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what does Protozoa look like?
what does Protozoa look like?
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Agriculture importance for Algae
Agriculture importance for Algae
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What does Agar create?
What does Agar create?
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What components creat Algin?
What components creat Algin?
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Study Notes
- Microbiology studies microscopic organisms, including bacteria, fungi, viruses, protozoa, algae, and slime molds.
- These organisms are generally too small to be seen without aid.
- Microbiology explores the structure, life processes, reproduction, and relationships to other organisms, including humans, animals, and plants.
- Microorganisms, though appearing simple, are extraordinarily complex and ubiquitous, found in air, soil, water, and on living beings.
- Pure microbiology focuses on the microorganisms and their functions.
- Applied microbiology involves use and application of microorganisms in medicine, industry, environment, food production, and pharmaceuticals.
Sub-classes of Pure Microbiology:
- Bacteriology studies bacteria.
- Mycology studies fungi.
- Virology studies viruses.
- Protozoology studies protozoa.
- Algology/Phycology studies algae.
- Parasitology studies parasites.
- Nematology studies nematodes.
- Immunology studies the immune system.
Applied Microbiology:
- Medical microbiology studies causative agents of diseases, their diagnosis, treatment, and preventive measures.
- Industrial microbiology studies large-scale growth of microorganisms for industrial chemicals, medicinal products, hormones, proteins, and beverage fermentation.
- Environmental microbiology studies interactions between microorganisms and the environment (soil, water, air).
- Food microbiology studies use of microorganisms in food production (yogurt, cheese, wine, beer), single-cell proteins, spoilage prevention, and disease transmission.
- Pharmaceutical microbiology studies the application of microorganisms to pharmaceutical developments and quality maintenance.
- Public health microbiology studies microorganisms and infectious diseases affecting human health.
Early History:
- Microbiology's beginnings trace back to microscope development.
- Robert Hooke observed and described small boxes (cells) in cork slices in the mid-1600s.
- Anton Van Leeuwenhoek observed microscopic organisms (animalcules) in the 1670s.
- Leeuwenhoek documented his observations with detailed descriptions and illustrations.
- He is considered the first to provide proper documentation and description of said observations.
- Royal Society of London received a letter from Leeuwenhoek in 1674.
- Leeuwenhoek is regarded as the father of microbiology.
- After his death, the study of microbiology did not develop rapidly because microscopes were rare and there was not much interest in microorganisms.
Spontaneous Generation Theory:
- The theory of spontaneous generation (abiogenesis) proposed that organisms visible to the naked eye could arise from non-living matter.
- Francesco Redi discredited this theory by covering meat with gauze and preventing flies from laying eggs, showing worms originated from fly eggs, not decaying meat.
- Louis Jablot conducted an experiment in which he divided hay infusion that had been boiled in flasks.
- He covered one and exposed one to the air where only the flask opened to air developed microorganisms.
- John Needham suggested that microscopic organisms could arise spontaneously from organic matter due to improperly sealed flasks.
- Lazzaro Spallanzani demonstrated that boiled and sealed flasks showed no microorganism growth.
- Air carries organisms and external air supports animal growth.
- Louis Pasteur and John Tyndall disproved spontaneous generation with experiments demonstrating air carries microorganisms.
- Pasteur trapped organisms using cotton plugs and observed them under a microscope.
- Sterile infusions stayed sterile in swan-necked flasks open to air because organisms settled in the neck bends and bacteria only reached broth when tipped.
- Pasteur's experiment proved microorganisms exist in the air.
Germ Theory:
- Louis Pasteur's germ theory postulated that microorganisms cause infectious diseases.
- Robert Koch demonstrated microorganisms' role in causing diseases, specifically anthrax in mice.
- Koch's postulates set standards for proving an organism's role in disease involving the following criteria:
- The microorganism must be found in all disease cases but not in healthy individuals.
- The microorganism must be isolated from the diseased individual.
- Inoculation of a healthy individual with the cultured microorganism must reproduce the disease.
- The organism must be isolated again from the new host.
- Koch's anthrax proof was confirmed by Pasteur's team.
- Bacillus anthracis spores survived after burial, were brought to the surface by earthworms, and made healthy animals sick when ingested.
- Koch sought ways to cultivate bacterial pathogens, initially using sterile cut potatoes before adding gelatin to liquid medium.
- Fannie Eilshemius Hesse provided agar.
- Richard Petri developed the petri dish.
- Koch developed media to grow pathogenic bacteria from the body using meat extracts and protein digests to make nutrient broth and agar.
- Koch isolated the bacillus that causes tuberculosis.
- Koch was awarded the 1905 Nobel Prize for his tuberculosis contributions.
Sterilization:
- Sterilization removes, kills, or deactivates all microorganisms and biological agents on a surface or in a fluid.
- John Tyndall found infusions require different boiling times for sterilization and hay infusions are hard to sterilize due to heat-resistant life forms.
- Tyndall proposed Tyndallization (fractional sterilization/discontinuous heating), boiling infusions for 15-20 minutes at 100°C daily for three days.
- Louis Pasteur invented pasteurization, heating at 72°C for 15 seconds to eliminate pathogenic microorganisms, mainly in milk and beverages.
- Other pasteurization methods include Vat pasteurization, ultra pasteurization, and higher temperature short time pasteurization.
- Autoclaving sterilizes by using steam under pressure (15 psi) to achieve 121°C for 15 minutes.
- Chemical methods, filtration, and radiation are also sterilization methods.
Cell Theory:
- Matthias Schleiden and Theodor Schwann stated all organisms are composed of cells.
- All organisms are made of one or more cells.
- Cells are the basic structural and functional units of life.
- All cells come from existing cells through cellular division.
Golden Age of Microbiology:
- During the 1800s and early 1900s, scientists identified many agents of infectious diseases, helping control epidemics.
- Virus discovery was made possible with Chamberland filter constructed by Charles Chamberland in 1884.
- In 1892, Dmitri Ivanovsky used the filter to show sap from diseased tobacco plants infectious to healthy plants, even after filtering.
- Martinus Beijerinck named the filtered infectious substance "virus" and is considered the beginning of virology with the studied tobacco mosaic disease virus.
- Edward Jenner used cowpox materials to vaccinate against smallpox, creating the world's first successful vaccine.
- Emile Roux and Pasteur produced the first veterinary vaccine and the human rabies vaccine.
- Alexander Fleming discovered penicillin in 1928 from Penicillium chrysogenium.
Era of Molecular Microbiology:
- Beginning in the 1950s, this era advanced knowledge of bacterial physiology, biochemistry, and genetics.
- Genetic manipulation includes DNA transfer between organisms.
- DNA sequencing revealed evolutionary relationships among bacteria.
- DNA sequencing gave birth to the field of genomics by 1990.
Prokaryotes:
- Prokaryotic cells are cells lacking a true nucleus and membrane-bound organelles, including Bacteria and Archaea.
- A prokaryotic cell has a single membrane where all reactions occur within the cytoplasm and exist as free-living organisms or parasites.
- Prokaryotic cells lack a nuclear membrane, mitochondria, Golgi bodies, chloroplasts, and lysosomes.
- Genetic material in prokaryotes exists on a single chromosome, lacking histone proteins, and the cell wall is made of carbohydrates and amino acids.
- The plasma membrane acts as mitochondrial membrane carrying respiratory enzymes.
- Asexual reproduction occurs via binary fission, while sexual reproduction occurs via conjugation.
- The genetic material, is present in the nucleoid region.
- Prokaryotic cells can be spherical, rod-shaped, or spiral.
Prokaryotic cell structure includes:
- Capsule: An outer protective covering for moisture retention, protection against engulfment, and attachment to surfaces.
- Cell Wall: The outermost layer defining the cell's shape.
- Cytoplasm: Composed of enzymes, salts, and cell organelles, with organelles suspended in a gel-like component.
- Cell Membrane: Surrounds the cytoplasm, regulating substance entry and exit.
- Pili: Hair-like structures for attachment to other bacterial cells (fimbriae aid surface attachment).
- Flagella: Long, whip-like structures for cell locomotion.
- Ribosomes: Responsible for protein synthesis.
- Plasmids: Non-chromosomal DNA structures not involved in reproduction.
- Nucleoid Region: Contains the bacterial DNA molecule.
- Plasma Membrane: A phospholipid layer separating the cell from the environment. -DNA: Genetic material that directs protein creation and cell activities.
Classification of Prokaryotes
- Prokaryotes are classified into two domains: Bacteria and Archaea.
- Bacteria include disease-causing pathogens, photosynthesizers, and symbionts.
- Archaea include organisms in extreme environments.
Classification Criteria:
- Shape: Cocci, rods, rigid helical (spirillium), flexible helical (spirochetes), vibrio.
- Staining Patterns: Based on how they stain.
- Biochemical Differences: Based on biochemical differences.
- Nucleotide Sequences: Sequences in genes, particularly rRNA.
- Genetic Differences: Archae are genetically distinct from Bacteria and Eukaryotes.
Reproduction in Prokaryotes:
- Asexual by binary fission
- Sexual by conjugation.
Binary Fission:
- The DNA replicates and attaches to the cell membrane.
- The cell wall enlarges and moves inwards.
- A cell wall forms between each DNA, dividing the cell.
Recombination:
- Genes transfer from one bacterium to another via conjugation, transformation, or transduction.
Conjugation:
- Genes transfer via a protein tube (pilus).
Transformation:
- DNA from the surroundings is taken up.
Transduction:
- Genetic material transfers with virus help.
Biology of Bacteria:
- Bacteria are prokaryotes.
- Most are single-celled/unicellular.
- Some, like Myxobacteria, have multicellular stages.
- Cyanobacteria create large colonies.
- Bacteria are microscopic.
- Most bacterial cell walls contain peptidoglycan.
- Bacteria are classified into Gram-negative and Gram-positive based on peptidoglycan thickness.
Ecology:
- Bacteria exist in almost every habitat.
- They inhabit soil, water, and air, and are found on animal skin, in mouths, and intestines.
- Many bacteria have symbiotic relationships.
- Some are mutually beneficial, and some are harmful (parasitism).
- Some cause disease and are known as pathogens.
- Bacteria cycle earth elements and decompose remains.
- Cyanobacteria produce oxygen through photosynthesis.
Ecological Relationship of Bacteria and Their Roles in Natural and Special Environments:
- Soil microbes gain energy from their environment.
- Enzymes decompose dead organic material, releasing nutrients.
- These enzymes convert carbohydrates, fats, nucleic acids, and nitrogenous compounds into simpler forms that are used by the green plants as raw materials.
- Saprophytic bacteria decompose organic compounds, convert them to manure, remove harmful waste, and act as nature's scavengers.
- Soil bacteria are used to improve crop production by decomposing organic matter, supplying nutrients, producing growth hormones, improving soil structure, and suppressing pathogens.
- Bacteria cycle oxygen, carbon, phosphorus, sulphur, and nitrogen in ecosystems.
- Some microbes use sunlight to convert carbon dioxide to oxygen.
Nitrogen fixers:
- Bacteria assimilate N for plants.
- They fix atmospheric nitrogen into ammonia.
- Nitrogen fixing bacteria have the nitrogenase enzyme that combines nitrogen with hydrogen to produce ammonia, which is further converted by the bacteria to make their own organic compounds.
- Free-living bacteria (e.g. Azotobacter, Clostridium) fix nitrogen in the soil.
- Symbiotic bacteria (e.g. Rhizobium, Bradyrhizobium) live in legume roots.
- Some bacteria (ammonifying and nitrifying bacteria) increase fertility.
- Decomposers reduce amino acids into ammonium salts in ammonification via Bacillus vulgaris.
- Nitrifying bacteria convert ammonium salts into nitrates.
- Plant growth-promoting rhizobacteria produce hormones and vitamins that enhance growth, promote bioremediation, and protect plants.
- Hormones like auxin and cytokinin encourage plant health.
Phosphorus Solubilizers:
- Bacteria make phosphorus available to roots and produce plant hormones.
- They help manage phosphorus in soils and mobilize it, preventing algae blooms.
Water:
- Bacteria purify drinking water.
- Bacteria in untreated water aid purification by biodegrading contaminants.
- Some bacteria are pathogens.
- Bacteria degrade organic compounds and clean oil spills.
- Hydrocarbon-degrading bacteria remediate ecosystems in the Niger Delta.
- Bacteria are used for the bioremediation of industrial wastes.
- Assays of water purity detect fecal contamination using indicator bacteria found in intestines of birds and mammals by using lab procedures.
Testing for E. coli:
- Testing for E. coli determines whether water or its products have been exposed to feces.
- Coliforms, including E. coli, are Gram-negative, lactose-fermenting, and gas-producing bacteria.
- Coliform assays have been used since 1914.
- Recently, microbiologists have found coliforms grow in fecal-free environments such as freshwater.
Food Industry:
- Fermentation (breakdown of carbohydrates in absence of oxygen)action of various bacteria produces organic compounds (lactic acid, acetic acid, etc).
- Bacteria help produce enzymes.
- Micrococcus bacteria flavor tea, coffee, and cocoa.
- Bacillus megaterium helps cure leaves of tea and tobacco, beans of coffee and cocoa.
- Milk converts into cheese, butter milk and yogurt due to bacteria.
- Acid-producing bacteria like Streptococcus lactis cause casein to precipitate to make curd.
- Microorganisms ripen cheese after salt addition.
Roles of Bacteria in Diseases:
- Improperly processed foods can be spoiled by saprophytic bacteria.
- Toxins from bacteria can cause food poisoning.
- Staphylococcus aureus causes gastrointestinal distress.
- Clostridium botulinum causes botulism.
- Salmonella species causes salmonellosis.
- Shigella dysenteriae causes shigellosis.
- Over 90% of human and 10% of plant diseases are caused by bacteria.
- Examples of diseases caused by bacteria such as cholera, tuberculosis, syphilis, anthrax, plague.
- Examples of plant diseases caused by bacteria are citrus canker, wilt diseases etc.
- Harmful bacteria are known as pathogenic bacteria.
Useful Roles of Bacteria in Medicine:
- Bacteria produce antibiotics.
- Alexander Fleming discovered penicillin and Waksman streptomycin.
- Tyrothricin was identified which was made up of two compounds.
- For an antibiotic to be considered good it should destroy a wide range of microbes and should not have side effects and should not give harm to the host's flora.
- Bacterial vaccines stimulate the immune system.
- Attenuated bacteria vaccines provide immunity.
- E. coli produce vaccine components.
- Enzymes are important enzymes and are used in medical settings.
- Probiotics are living microorganisms that enhance health.
- Bacteria maintain gut health and boost the immune system as probiotics.
- Clostridium novyi can target and kill cancer cells.
Biology of Fungi:
- Study the biology, ecology, and applications of fungi.
- Fungi are eukaryotic organisms in a wide range of structure that can be single celled to multicellular, microscopic or present large fruiting bodies, Fungi include yeasts, molds, and mushrooms.
- Cell walls are made of chitin and are heterotrophic.
- Critical role in ecosystems due to metabolic versatility and ecological relationships.
Decomposers in the Ecosystem:
- Break down organic matter, like bacteria.
- Fungi form symbiotic relationships with plant roots to enhance nutrient absorption and get carbohydrates in return.
- Fungi and algae or cyanobacteria form Lichens to get food while sheltering or getting water for the algae.
- Fungi coexist without harm so benefit is not noticeable in Commensalism.
- Some fungi extract nutrients and cause parasitic damage to plants.
- Benefits of fungi are soil biodiversity and fungi tackle challenges like climate change and hunger.
Nutrient Cycling of Fungi:
- They break down matter, making the nutrients available.
- Fungi have the ability to propel nitrogen fixation and phosphorus mobilization.
Carbon Cycling and Climate Regulation:
- Fungi cycle carbon through the soil food web.
- Both fungi and plants capture carbon from the atmosphere and store it.
- Fungi controls the ability to control crop plant diseases but controlling fungal pathogens.
- Fungi resist the ability to resist stress conditions by helping plants.
- They can improve plant tolerance to stresses.
- Soil structured and soil stabilizes depending on the Organic matter.
- They are sustainable agriculture and they reduce the need for pesticides.
Nutritional Value of Edible Mushrooms:
- Rich in vitamins B, C, and D, fiber, and minerals.
- Good source of protein.
- Can be grown without fertile soil using agricultural waste.
- Can reduce agro-waste while increasing food supply, farmers' income and generating new employment opportunities.
- Fungi can play the role of development of disease but they are also used to prevent and treat diseases.
- Fungal infections are cause diseases of the skin, hair, and nails, such as athlete's foot, ringworm etc.
- Fungal exposure causes asthma due to spores.
Fungi produce many helpful things in the medicine industry such as:
- Antibiotics such as penicillin and cephalosporins.
- Immunosuppressants such as cyclosporie to stop reactions of the body's immune systems.
- Antifungal agents: such as griseofulvin.
- Statins that treat high cholestrol such as rosuvastatin.
- Cancer treatments: Fungal metabolites are being tested in clinical trials to treat cancer.
Water treatment using Fungi:
- Fungi can break down organic material, contribute to the food web, and affect water quality.
- Fungi break down organic material like leaves and twigs for Freshwater.
- Fungi break down organic material in marine sediments and they break down organic sludge reduces amount of waste.
- Water in the surface water ecosystems are also contributed to by fungi.
- Some antimicrobial properties that help pathogenic bacteria are wastewater.
Viruses:
- Typically described as obligate intracellular parasites.
- They are acellular infectious agents.
- They require the presence of a host cell in order to multiply and have been found to infect all types of cells.
Viral Structure:
- Envelope:
- It is described as a lipid bilayer that surrounds the virus, derived from the host cell's membrane during viral replication and budding.
- It provides protection to the viral components and assists in the entry of the virus into host cells through fusion with the host cell membrane.
- Envelope Proteins:
- These are glycoproteins that protrude from the envelope's surface.
- Attachment and Fusion proteins are included.
- Essential hosts for cell recognition and bindings and these proteins play a roll in the viral life cycle by enabling infection.
- Nucleocapsid Structure:
- Structural complex formed by the capsid (protein coat) and the viral genome.
- Composed of protein subunits (capsomers) that assemble around the viral nucleic acid (either DNA or RNA).
- It protects the viral genome and plays a role in its delivery to the host cell's cytoplasm during infection, aids in the assembly of new virions within the host cell.
- Viral Genome
- The viral genome consists of the nucleic acid that encodes the information necessary for viral replication and protein synthesis.
- This can be single-stranded or double-stranded DNA or RNA.
- It carries the genetic information required for the virus to replicate inside a host cell and produce new viral particles.
- Viral Tegument Description:
- Proteinaceous layer found between the envelope and the nucleocapsid in certain enveloped viruses (most notably herpesviruses).
- It contains various viral proteins that play roles in the viral lifecycle, such as enzymes and immune evasion factors.
- Tegument proteins assist in the early stages of infection, manipulating host cell processes, facilitating viral replication, evade detection by the host's immune system.
Viral classifiction Based on
- Shape:
-Helical
-Polyhedral
-Complex
-Spherical
- Size:
-20 to 300 nanometers, much smaller than bacteria.
- Genone type:
-DNA or RNA
-Single-stranded (ss) or double-stranded (ds).
Virus Replication Cycle:
- Attachment:
- Binds to specific receptors on the host cell surface.
- Penetration: -Enters or its genetic material enters the host cell.
- Biosynthesis:
- Hijacks the host cell machinery to replicate viral particles.
- Maturation:
- Newly synthesized viral components assemble into new viruses.
- Release:
- New viral particles are released from the host cell, often destroying it (lysis).
Types of Viruses Based on Their Replication:
- Lytic Cycle:
- Virus immediately replicates and bursts the host cell.
- Lysogenic Cycle:
- Viral genome integrates into host DNA and replicates passively with host cell division.
Ecological Roles of Viruses:
- Soil:
- Microbial Regulation:
- Bacteriophages: Target specific bacteria, regulating populations in soil environments.
- By lysing bacteria, bacteriophages control bacterial abundance and diversity.
- Bacteriophages: Target specific bacteria, regulating populations in soil environments.
- Nutrient Cycling:
- Virioplankton:
- Contribute to nutrient cycling by lysing microbial cells and releasing nutrients back into the soil.
- Enhances the available nutrient pool.
- Virioplankton:
- Soil Health and Fertility:
- Phages: Help maintain a balanced microbial community.
- Horizontal Gene Transfer:
- Mobile Genetic Elements: Some viruses facilitate the transfer of genes, including those for antibiotic resistance, enhancing genetic diversity among soil bacteria.
- Pathogen Control: -Bacteriophage effectiveness has been studied in agricultural environments.
- Microbial Regulation:
- Water:
-Microbial Control:
-Tailed Bacteriophages: Target specific pathogenic bacteria in aquatic systems, regulating their populations and maintaining water quality.
- Nutrient Cycling:
- Aquatic Phages: contribute to the breakdown of marine bacterial cells, releasing essential nutrients like nitrogen and carbon. -Promotes the growth of phytoplankton and other microorganisms.
- Disease Transmission:
- Infectious Hematopoietic Necrosis Virus (IHNV): Affects fish populations in freshwater systems, impacting the overall health of aquatic ecosystems.
- Biogeochemical Processes:
- Marine RNA Viruses: Influence carbon cycling by affecting the decomposition processes of organic matter.
- Ecosystem Dynamics:
- Cyanophage: Viruses regulate cyanobacteria populations, influencing phytoplankton dynamics and the broader aquatic food web.
- Nutrient Cycling:
Viruses in the Food Industry:
-
Biocontrol Agents Application:
- Bacteriophages are used to target foodborne pathogens.
- Listeria monocytogenes which target:
- Plages are applied in ready-to-eat, dairy products, and salads to enhance food safety.
- Bacteriophages are used to reduce Salmonella in poultry and meat products..
-
Food Fermentation Application:
- Bacteriophages play a role in the balance beneficial bacteria in fermented dairy products.
- Eliminate spoilages and improve enhance flavor, texture, and shelf life.
-
Food Preservation :
- Phages are used as a natural biopreservative
-
Viral Vectors in Biotechnology Applications:
- Plant viruses transfer genes into crops, to prevent harm from pests to improve their content making it sustainable.
-
Diagnosis and Detection of Pathogens: -Vuruses are used in genetic testing to help identify them through methods like PCR.
-
Research and Development -Viruses are used as toolds to study viral dynamics
-
Sustainable Food Production -With use of viral agents, the reliance on chemical fertilizers contributing to sustaining is reduced.
Pathogenic Role of Viruses in Disease Development
- Infectious Diseases:
-Respiratory Infections: Influenza virus is the cause of season influenza and corona virus is the cause of COVID-19.
-Hepatitis Viruses: Leads to liver and cirrois infection.
-Human Immunodeficiency Virus (HIV): Compromises the immune system can lead to AIDS.
-Herpesviruse: Cold sores to genital herpes.
- Mechanisms of Pathogenicity: -Cell Damage: Causes tissue danage because they repicate inside host cells. -Immune repsonse:Body's response to viral interfections. -Oncogenesis: Certain can induce cnaver by integrating viral genrtic material.
Role of Viruses in Medicine and Therapeutics
-Vaccines are to prevent viral infections.
-Antiviral Therapies target viral replication as well as HIV's Hepiatitis C and developed including Antiretroviral & Direct-acting antivirals.
-Oncolytic Viruses can selectively infect and kill cancer cells.
-Gene Therapy Viral vectors are use to delivery genetic in patiens' cells
-Immunotherapy's viruses stimulate an an immune response against cancer.
Conclusion
-Understandinh Viruses helps provide tools in innovative, therapeutic strategies and helps guide benefits in medicine.
Protozoa:
- Single-celled eukaryotic microorganisms belonging to the Kingdom Protista.
- Exhibit diverse morphology and physiology, ranging from 1 to 100 micrometers, and exist either freely or parasitically.
- As members of kingdom Protozoa, they are neither plants, animals, nor fungi.
- Integral in ecological balance, research, and industrial applications, but parasitic members pose health challenges.
Key Features of Protozoa:
- Cell Structure: Protozoa have a nucleus enclosed by a nuclear membrane and contain organelles like mitochondria, endoplasmic reticulum, and Golgi apparatus.
- Locomotion: Move using structures called flagella, cilia, or pseudopodia.
- Nutrition:
-Holozoic Nutrition -(Phagotrophic): Ingest solid particles such as bacteria or algae, the food enclosed in a food vacuole where enzymes break it down.
-Saprozoic - (Osmotrophic): Absorb nutrients directly from their environment.
-Parasitic: Derive nutrients from a host.
- Halophytic Nutrition: synthesize their own food through photosynthesis so they have chlorophyll or chloroplast to capture sunlight.
Protozoa Reproduction
- Asexually and sexually, the asexual reproduction is binary fission/budding the sexual is syngamy/conjugation.
Protozoa Habitat
- diverse they live in soil water and in the bodies of hosts.
Relationships among protozoa
- Symbiosis occurs when organisms benefit.
- associations among protozoan are also mutually beneficial.
- commensialism only affects with one is uneffected. -commensially are found in ruminent animals. -parasistism protozoa hurt their host.
- The many protozona pathogens that cause disease,some have alternative two phase life alternating (trophozoites) and resting cyst that survive harsh conditions.
- Many protozoa act as predators and feed on bacteria to get the micriboial population regulating. The roles in protozoa are used in natural enviorments.
Role of protoza in Water
- Aquatic chains the protozoa use are the food source for the primary consumer.
- The water purification the protozoa help reduce the bacterial load.
Role of protozoa in Food industry
- Fermentations with cellulites may be evolved in the industry with dairy productions
- Biomediation are employed to treat waster water by consuming pollutants.
Protozoa causes of Disease and Devlopement
- Play roles as a significant pathogens. -Human Diseases Malaria caused from transmitted anatheles. -Animal disease.
Protozoa in Medician
-Vaccines Studies: of immune responses to protozoa and the develope aids of vaccine.
Algea Definition
- A green group of autotrophic plants like organisms
- simple, non vascular steam and leaf lie organs,unicilluar and muticellular.
Distinctive Characteristic of Algae
- have no differentiation however they are chlorophyll bearing thalloid plants.
- All of them are aquatic except few
- when muticelluar they are uncellular sex organs
- No embryo is formed
- Repirudtion takes place by both modes
- Algea are classify according to nuclear, composition, and pigment type.
Types of Algea
- The types of blue ,green, and red vary on pigments.
- Contain Chlorophyll and are green
- Algea are for the most part aquatic there are aquatic, and terresital types.
Economic Imporatance
- blue green algae are important in agenture.
- Algea are an important sourse of food for the aquatic animals because they syntesize organic compoundds, and itis an imporant sourse of food.
- Algea an help with space travel because they are a great sourse of food.
- Algue is also the origen of pertroleam used for gas, algea alwsys removes calcium in its from.
Algea are in sewage disposal
Useful properties
- Agar Agar
- and Algin with algea aids in other process involving textiles, water as well as textile and skin product.
- All of these cause Algea to cause side effects
The algae have negative value as well which can be outlines in following headings-
- causes many infections particularly toxicity.
- Water blooms In the summers preferably in rainy and spring season and
Taxonomy Definition:
- It is the science of biological classification contains identification and nomenclature.
- Classification organisms sharing simular phsic, and genetuc traits into specific grouups
- Nomenclature in the brach concerned with naming the assigenmt of tanomic groups
History of Taxonomy:
- Classified all living organisms in animals and plants and is considered the reason taxonomy.
- This used Cell type level of organization and all of the type of mutrition
- The way it does this also shows its morphology, biochemistry and can allow the way its preformed.
- There are specific ways to look bacteria
The techniques are used to culture Bacteria are all the same for others
- Isolate
- obbervation
and
- identification
- To get specific types of bateria. _Solid for those on soil or semi . _lIquuid. rich in nutrients..
- Differential and select are are the key the incubate.
- To prevent the the use lyophiization.
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