Glycogen Synthesis and Breakdown
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Questions and Answers

What role does adenylate cyclase play in the regulatory cascade?

  • It converts ATP to cyclic AMP. (correct)
  • It activates G proteins.
  • It degrades cyclic AMP.
  • It catalyzes protein kinase activation.
  • What is one effect of epinephrine on glycogen metabolism?

  • It promotes glycogen synthesis.
  • It enhances ATP production.
  • It activates phosphorylase a to break down glycogen. (correct)
  • It blocks the action of cyclic AMP.
  • How does the action of pyrophosphatase impact the adenylate cyclase reaction?

  • It stabilizes cyclic AMP.
  • It inhibits the conversion of ATP to cyclic AMP.
  • It drives the reaction towards product formation. (correct)
  • It allows inorganic pyrophosphate to accumulate.
  • What is the main purpose of the pentose phosphate pathway?

    <p>To provide NADPH for biosynthesis.</p> Signup and view all the answers

    Which enzyme is activated by cyclic AMP as part of the glycogen breakdown process?

    <p>Phosphorylase kinase.</p> Signup and view all the answers

    What is the consequence of the dual function of the epinephrine cascade?

    <p>It prevents futile cycling of energy.</p> Signup and view all the answers

    Where do all reactions of the pentose phosphate pathway take place?

    <p>In the cytosol.</p> Signup and view all the answers

    What is produced when ATP is converted by adenylate cyclase?

    <p>Cyclic AMP.</p> Signup and view all the answers

    What molecule is formed when glucose-1-P reacts with UTP?

    <p>UDP-glucose</p> Signup and view all the answers

    What is the role of inorganic pyrophosphatase in glycogen synthesis?

    <p>It hydrolyzes pyrophosphate to release energy.</p> Signup and view all the answers

    Which enzyme transfers a glucose unit from UDP-glucose to glycogen?

    <p>Glycogen synthetase</p> Signup and view all the answers

    Why is it necessary to use different enzymes for glycogen breakdown and synthesis?

    <p>To allow for efficient energy utilization.</p> Signup and view all the answers

    What is the consequence if both breakdown and synthesis of glycogen occurred simultaneously?

    <p>There would be a futile cycle that wastes energy.</p> Signup and view all the answers

    What defines hormones in the context of metabolism?

    <p>They are organic compounds synthesized in one tissue and transported to another.</p> Signup and view all the answers

    How does epinephrine affect glycogen metabolism?

    <p>It activates catabolic enzyme phosphorylase a.</p> Signup and view all the answers

    What is the net result of the hormonal regulation in glycogen metabolism?

    <p>Neither breakdown nor synthesis occurs simultaneously.</p> Signup and view all the answers

    What is the primary source of reducing power for anabolic pathways?

    <p>NADPH</p> Signup and view all the answers

    Which of the following anabolic pathways is specifically mentioned as utilizing NADPH?

    <p>Fatty acid biosynthesis</p> Signup and view all the answers

    In the oxidative phase of the pentose phosphate pathway, which substance is formed from glucose 6-phosphate?

    <p>Ribulose 5-phosphate</p> Signup and view all the answers

    What is the net reaction of the oxidative phase of the pentose phosphate pathway?

    <p>glucose 6-phosphate + 2 NADP+ + H2O → ribulose 5-phosphate + 2 NADPH + 2 H+ + CO2</p> Signup and view all the answers

    What happens to the ribulose 5-phosphate after the oxidative phase if it is in excess?

    <p>It is converted to glucose 6-P.</p> Signup and view all the answers

    During the non-oxidative phase of the pentose phosphate pathway, which two five-carbon sugars are converted into fructose 6-P and glyceraldehyde 3-P?

    <p>Ribose 5-P and Xylulose 5-P</p> Signup and view all the answers

    What is a main characteristic of the anabolic pathways, as described?

    <p>They produce more reduced products than reactants.</p> Signup and view all the answers

    What type of reactions primarily take place in the oxidative phase of the pentose phosphate pathway?

    <p>Oxidative reactions</p> Signup and view all the answers

    What is the initial product formed from the oxidation of glucose 6-P in the oxidative phase?

    <p>6-phosphoglucano-δ-lactone</p> Signup and view all the answers

    What molecule is reduced during the first reaction of the oxidative phase?

    <p>NADP+</p> Signup and view all the answers

    Why does the oxidative phase stop despite producing NADPH?

    <p>To avoid the toxicity of excess ribulose 5-P</p> Signup and view all the answers

    Which compound is produced directly after the decarboxylation of 6-P-gluconate?

    <p>Ribulose 5-P</p> Signup and view all the answers

    What is the primary purpose of the non-oxidative phase of the pentose pathway?

    <p>To produce useful intermediates for glycolysis</p> Signup and view all the answers

    Which enzyme catalyzes the conversion of ribulose 5-P into ribose 5-P?

    <p>Phosphopentose isomerase</p> Signup and view all the answers

    What are the final products formed from ribulose 5-P in the non-oxidative stage?

    <p>Glyceraldehyde 3-P and fructose 6-P</p> Signup and view all the answers

    What is the consequence of stopping the pathway after synthesizing NADPH?

    <p>Accumulation of ribulose 5-P</p> Signup and view all the answers

    Which coenzyme is utilized by transketolase in the reaction process?

    <p>Thiamine pyrophosphate</p> Signup and view all the answers

    In the transaldolase reaction, which fragments are being transferred?

    <p>A three-carbon fragment from sedoheptulose 7-phosphate</p> Signup and view all the answers

    What is the stereochemistry of sedoheptulose 7-phosphate derived from?

    <p>Ribose 5-phosphate</p> Signup and view all the answers

    How does the transketolase reaction function in relation to the pentose phosphate pathway?

    <p>It can function reversibly under certain conditions</p> Signup and view all the answers

    Which of the following represents the correct conversion in the transaldolase step?

    <p>C-7 + C-3 = C-6 + C-4</p> Signup and view all the answers

    What is produced when erythrose 4-phosphate reacts with xylulose 5-phosphate in the final transketolase reaction?

    <p>Glyceraldehyde-3-phosphate and fructose 6-phosphate</p> Signup and view all the answers

    What is the role of the transketolase enzyme in the series of reactions described?

    <p>To transfer two-carbon fragments between sugar phosphates</p> Signup and view all the answers

    What is the immediate result of adenylate cyclase activity?

    <p>Conversion of ATP to cyclic AMP</p> Signup and view all the answers

    How does the inactivation of glycogen synthase by epinephrine primarily affect glycogen metabolism?

    <p>It prevents simultaneous synthesis and breakdown of glycogen</p> Signup and view all the answers

    Which feature characterizes the regulatory cascade triggered by hormone binding to its receptor?

    <p>Sequential activation of enzymes via phosphorylation</p> Signup and view all the answers

    What is the function of phosphorylase kinase within the glycogen breakdown cascade?

    <p>It phosphorylates phosphorylase b to phosphorylase a</p> Signup and view all the answers

    Which statement regarding second messengers like cyclic AMP is accurate?

    <p>They mediate signaling between extracellular hormones and intracytoplasmic reactions</p> Signup and view all the answers

    What consequence does the rapid degradation of inorganic pyrophosphate have on the adenylate cyclase reaction?

    <p>It enhances the formation of cyclic AMP</p> Signup and view all the answers

    In the context of the pentose phosphate pathway, what primary compound is generated from glucose-6-phosphate during its oxidative phase?

    <p>NADPH</p> Signup and view all the answers

    What distinguishes the dual function of the epinephrine cascade in terms of glycogen metabolism?

    <p>It activates breakdown while inhibiting synthesis</p> Signup and view all the answers

    Which compound is formed after the oxidation of glucose 6-P by glucose 6-P dehydrogenase?

    <p>6-phosphoglucano-δ-lactone</p> Signup and view all the answers

    What is the primary outcome of the oxidative phase of the pentose phosphate pathway?

    <p>Synthesis of NADPH</p> Signup and view all the answers

    How many reactions are involved in the conversion of ribulose 5-P to other useful intermediates during the non-oxidative phase?

    <p>Five reactions</p> Signup and view all the answers

    What type of compound is ribulose 5-P before being converted in the non-oxidative phase?

    <p>Pentose sugar</p> Signup and view all the answers

    Which enzyme is responsible for the conversion of the lactone product into an open chain carboxylic acid?

    <p>Lactonase</p> Signup and view all the answers

    What is a likely consequence of excess ribulose 5-P accumulation in the cell?

    <p>Energy waste</p> Signup and view all the answers

    What two five-carbon compounds result from the conversion of ribulose 5-P during the non-oxidative phase?

    <p>Ribose 5-P and xylulose 5-P</p> Signup and view all the answers

    Which molecule is produced during the decarboxylation of 6-P-gluconate?

    <p>Ribulose 5-P</p> Signup and view all the answers

    What is the significance of NADPH in anabolic pathways?

    <p>It acts as a reducing agent for biosynthetic processes.</p> Signup and view all the answers

    What occurs during the oxidative phase of the pentose phosphate pathway?

    <p>Production of NADPH from the oxidation of glucose 6-P.</p> Signup and view all the answers

    In mode 4 of the pentose phosphate pathway, when is this pathway primarily utilized?

    <p>When both NADPH and ATP are required without ribose 5-P.</p> Signup and view all the answers

    How does the pentose phosphate pathway manage excess ribulose 5-P?

    <p>It converts it back to glucose 6-P via gluconeogenesis.</p> Signup and view all the answers

    Which of the following correctly describes the non-oxidative phase of the pentose phosphate pathway?

    <p>It involves the conversion of five-carbon sugars to intermediates of glycolysis.</p> Signup and view all the answers

    What is the net reaction of the oxidative phase regarding outputs?

    <p>1 glucose 6-P + 2 NADP+ + H2O → 1 ribulose 5-P + 2 NADPH + 2 H+ + CO2.</p> Signup and view all the answers

    What type of molecules are formed during the conversion of xylulose 5-P and ribose 5-P in the non-oxidative phase?

    <p>Fructose 6-P and glyceraldehyde 3-P.</p> Signup and view all the answers

    Which statement best summarizes the anabolic nature of biosynthetic pathways?

    <p>They require reducing power to synthesize more complex molecules.</p> Signup and view all the answers

    What is the primary function of UDP-glucose pyrophosphorylase in glycogen synthesis?

    <p>To convert glucose-1-P and UTP into UDP-glucose</p> Signup and view all the answers

    What is an important outcome of the hydrolysis of pyrophosphate (PPi) in the context of glycogen synthesis?

    <p>It drives the reaction toward product formation</p> Signup and view all the answers

    Which enzyme is responsible for transferring a glucose unit from UDP-glucose to glycogen?

    <p>Glycogen synthetase</p> Signup and view all the answers

    Why is it important that different enzymes are used for glycogen breakdown and synthesis?

    <p>To allow hormonal regulation of each process separately</p> Signup and view all the answers

    What could occur if both glycogen breakdown and synthesis were to happen simultaneously?

    <p>A futile cycle that wastes energy</p> Signup and view all the answers

    What type of molecule is epinephrine classified as in metabolic processes?

    <p>A low molecular weight hormone</p> Signup and view all the answers

    What is the initial product formed when glucose-1-P reacts with UTP?

    <p>UDP-glucose</p> Signup and view all the answers

    Which enzyme is activated by epinephrine to promote glycogen breakdown?

    <p>Phosphorylase a</p> Signup and view all the answers

    What is the outcome of the transketolase reaction involving xylulose 5-phosphate and ribose 5-phosphate?

    <p>Glyceraldehyde-3-phosphate and sedoheptulose 7-phosphate</p> Signup and view all the answers

    Which product is generated from the transaldolase reaction using sedoheptulose 7-phosphate and glyceraldehyde 3-phosphate?

    <p>Erythrose 4-phosphate and fructose 6-phosphate</p> Signup and view all the answers

    How does the stereochemistry of sedoheptulose 7-phosphate relate to ribose 5-phosphate?

    <p>It has a hydroxyl group on C-3 from the C-1 carbonyl carbon.</p> Signup and view all the answers

    What is the role of thiamine pyrophosphate in the transketolase reaction?

    <p>It facilitates the transfer of a two carbon fragment.</p> Signup and view all the answers

    What unique aspect distinguishes the second transketolase reaction from the first?

    <p>It involves different substrates and products.</p> Signup and view all the answers

    Which two compounds are produced from the final transketolase II reaction?

    <p>Glyceraldehyde-3-phosphate and fructose 6-phosphate</p> Signup and view all the answers

    What type of reaction do transketolase and transaldolase facilitate in the pentose phosphate pathway?

    <p>Transfers of carbon fragments between sugars.</p> Signup and view all the answers

    Which of the following best describes the products formed from the transketolase reaction?

    <p>A combination of three and seven carbon sugars.</p> Signup and view all the answers

    What is the primary role of phosphorylase a in glycogen metabolism?

    <p>To release 1,4-linked glucose units from glycogen</p> Signup and view all the answers

    Which structure primarily characterizes glycogen?

    <p>A polymer with 90% α-1,4 and 10% α-1,6 linked glucose units</p> Signup and view all the answers

    Why does phosphorylase a face limitations in glycogen degradation?

    <p>It cannot attack glucose units near α-1,6 branch points</p> Signup and view all the answers

    What enzyme facilitates the conversion of glucose-1-P to glucose-6-P?

    <p>Phosphoglucomutase</p> Signup and view all the answers

    What is the significance of the non-reducing ends in glycogen molecules?

    <p>They allow for rapid release of glucose units</p> Signup and view all the answers

    What type of reaction is involved in glycogen synthesis compared to glycogen breakdown?

    <p>Glycogen synthesis requires an energy input</p> Signup and view all the answers

    What is the activated sugar nucleotide intermediate used in glycogen synthesis?

    <p>UDP-glucose</p> Signup and view all the answers

    How does the structure of glycogen affect its enzyme interactions?

    <p>The configuration allows multiple enzymatic reactions at once</p> Signup and view all the answers

    What product is formed when glucose-1-P reacts with UTP during glycogen synthesis?

    <p>UDP-glucose</p> Signup and view all the answers

    What role does the hydrolysis of pyrophosphate (PPi) play in glycogen synthesis?

    <p>It drives the reaction toward product formation.</p> Signup and view all the answers

    Why are different enzyme systems necessary for glycogen synthesis and breakdown?

    <p>To allow for hormonal regulation of each process.</p> Signup and view all the answers

    What is the primary outcome of the hormonal regulation in glycogen metabolism?

    <p>It coordinates the activation and deactivation of metabolic pathways.</p> Signup and view all the answers

    What is released as a byproduct when a glucose unit is transferred to glycogen?

    <p>UDP</p> Signup and view all the answers

    What effect does the activation of phosphorylase a have on glycogen?

    <p>It degrades glycogen to release glucose.</p> Signup and view all the answers

    What is a characteristic of hormones in metabolic processes?

    <p>They are synthesized in one tissue and transported to another.</p> Signup and view all the answers

    Which statement is true regarding the enzyme systems in glycogen metabolism?

    <p>They employ specific enzymes for each process.</p> Signup and view all the answers

    What crucial role does the binding of a hormone play in the regulatory cascade?

    <p>It activates the extracellular receptor protein.</p> Signup and view all the answers

    Which statement best describes the effect of epinephrine on glycogen metabolism?

    <p>It activates glycogen breakdown while inhibiting synthesis.</p> Signup and view all the answers

    What is a consequence of the rapid degradation of inorganic pyrophosphate in the adenylate cyclase reaction?

    <p>It enhances the conversion of ATP to cyclic AMP.</p> Signup and view all the answers

    Which enzyme is responsible for converting ATP into cyclic AMP?

    <p>Adenylate cyclase</p> Signup and view all the answers

    During the regulatory cascade, what happens after cyclic AMP activates a protein kinase?

    <p>It activates phosphorylase kinase.</p> Signup and view all the answers

    Which factors characterize the pentose phosphate pathway?

    <p>It integrates with glycolysis and gluconeogenesis.</p> Signup and view all the answers

    Which part of the regulatory cascade is responsible for the cleavage of glycogen?

    <p>Phosphorylase a</p> Signup and view all the answers

    What is the main signal transduction effect of hormonal actions like that of epinephrine?

    <p>Concurrent activation of catabolic and inactivation of anabolic pathways.</p> Signup and view all the answers

    What is the primary function of NADPH in anabolic pathways?

    <p>To act as a reducing agent</p> Signup and view all the answers

    In which phase of the pentose phosphate pathway is NADPH generated?

    <p>Oxidative phase</p> Signup and view all the answers

    What occurs to ribulose 5-P when it is in excess after the oxidative phase?

    <p>It undergoes further reactions to produce intermediates of the TCA cycle</p> Signup and view all the answers

    Which of the following is a product of the oxidative phase of the pentose phosphate pathway?

    <p>Ribulose 5-P</p> Signup and view all the answers

    What defines the non-oxidative phase of the pentose phosphate pathway?

    <p>It involves the conversion of five-carbon sugars to glycolytic intermediates</p> Signup and view all the answers

    How does the cell's demand for NADPH influence the pentose phosphate pathway?

    <p>It directs the excess ribulose 5-P to gluconeogenesis</p> Signup and view all the answers

    What is a consequence of the anabolic nature of biosynthetic pathways?

    <p>They produce molecules with a higher reduction state</p> Signup and view all the answers

    Which of the following intermediates is NOT produced during the non-oxidative phase of the pentose phosphate pathway?

    <p>Glucose 6-P</p> Signup and view all the answers

    What is produced during the first reaction of the oxidative phase of the pentose phosphate pathway?

    <p>NADPH</p> Signup and view all the answers

    Why is the pathway unable to stop after the oxidative phase despite producing NADPH?

    <p>Ribulose 5-P would accumulate and become toxic.</p> Signup and view all the answers

    Which enzyme catalyzes the conversion of 6-P-gluconate to ribulose 5-P?

    <p>6-P-Gluconate Dehydrogenase</p> Signup and view all the answers

    What are the products formed from ribulose 5-P during the non-oxidative phase?

    <p>Fructose 6-P and Glyceraldehyde 3-P</p> Signup and view all the answers

    Which intermediate does glucose 6-P get oxidized to in the first reaction of the oxidative phase?

    <p>6-Phosphoglucono-δ-lactone</p> Signup and view all the answers

    What is the main role of lactonase in the pentose phosphate pathway?

    <p>To open the lactone structure and form 6-P-gluconate</p> Signup and view all the answers

    What happens to the five-carbon intermediate, ribulose 5-P, in the non-oxidative phase?

    <p>It is transformed into intermediates for glycolysis.</p> Signup and view all the answers

    Which reaction type primarily occurs in the oxidative phase of the pentose phosphate pathway?

    <p>Oxidation and reduction</p> Signup and view all the answers

    What is the predominant type of linkage in the glycogen polymer structure?

    <p>α-1,4 linked glucose units</p> Signup and view all the answers

    What role does NADPH play in anabolic pathways?

    <p>It is a source of reducing power.</p> Signup and view all the answers

    What is formed when phosphorylase a cleaves glycogen?

    <p>Glucose-1-P</p> Signup and view all the answers

    Which enzyme is responsible for converting glucose-1-P to glucose-6-P in glycogen metabolism?

    <p>Phosphoglucomutase</p> Signup and view all the answers

    In which phase of the pentose phosphate pathway is NADPH primarily produced?

    <p>Oxidative phase</p> Signup and view all the answers

    What is the significance of the non-oxidative phase of the pentose phosphate pathway?

    <p>It converts ribulose 5-P into intermediates of the TCA cycle.</p> Signup and view all the answers

    What is the energy implication of glycogen synthesis in contrast to its breakdown?

    <p>Glycogen synthesis requires energy input.</p> Signup and view all the answers

    What type of glucose units cannot be cleaved by phosphorylase a due to their proximity to branch points?

    <p>1,6-linked</p> Signup and view all the answers

    What reaction is catalyzed during the conversion of glucose 6-P in the oxidative phase?

    <p>Oxidation to pentose sugars.</p> Signup and view all the answers

    What intermediate is involved in the synthesis of glycogen from glucose?

    <p>UDP-glucose</p> Signup and view all the answers

    What occurs to excess ribulose 5-P produced in the oxidative phase?

    <p>It is converted back to glucose 6-P.</p> Signup and view all the answers

    Which feature of glycogen structure is primarily responsible for enabling rapid glucose mobilization?

    <p>Extensive branching</p> Signup and view all the answers

    Which statement accurately describes the anabolic pathways mentioned?

    <p>They are reductive and require reducing power.</p> Signup and view all the answers

    Which product is NOT formed during the oxidative phase of the pentose phosphate pathway?

    <p>Pyruvate</p> Signup and view all the answers

    What mechanism allows for the transformation of 1,6 branches in glycogen to linear forms for further degradation?

    <p>Transferase and α-1,6-glucosidase</p> Signup and view all the answers

    Which phase of the pentose phosphate pathway generates ATP?

    <p>None of the phases generate ATP</p> Signup and view all the answers

    What is the ultimate effect of the epinephrine cascade on glycogen metabolism?

    <p>It inactivates glycogen synthesis and activates glycogen breakdown.</p> Signup and view all the answers

    Which enzyme is responsible for the conversion of ATP to cyclic AMP?

    <p>Adenylate cyclase</p> Signup and view all the answers

    What happens to inorganic pyrophosphate in the adenylate cyclase reaction?

    <p>It is hydrolyzed rapidly by pyrophosphatase.</p> Signup and view all the answers

    What is a significant outcome of the pentose phosphate pathway?

    <p>It synthesizes NADPH for reductive biosynthesis.</p> Signup and view all the answers

    Which of the following correctly describes a feature of the regulatory cascade involved in activating glycogen catabolism?

    <p>It includes the interaction of activated receptors and G proteins.</p> Signup and view all the answers

    What is the primary role of cyclic AMP in cellular signaling?

    <p>It activates downstream kinases.</p> Signup and view all the answers

    Why does the action of epinephrine prevent a futile cycle in glycogen metabolism?

    <p>It regulates enzymatic activity, ensuring that only one pathway is active at a time.</p> Signup and view all the answers

    During the oxidative phase of the pentose phosphate pathway, which compound is primarily produced from glucose 6-phosphate?

    <p>Ribulose 5-phosphate</p> Signup and view all the answers

    What is the primary role of UDP-glucose pyrophosphorylase in glycogen synthesis?

    <p>To convert glucose-1-P and UTP into UDP-glucose and PPi</p> Signup and view all the answers

    What effect does the hydrolysis of inorganic pyrophosphate have on glycogen synthesis?

    <p>It drives the reaction towards product formation</p> Signup and view all the answers

    What is the outcome of the second step in glycogen synthesis?

    <p>Transfer of glucose from UDP-glucose to the non-reducing end of glycogen</p> Signup and view all the answers

    Why is it crucial to use different enzyme systems for glycogen breakdown and synthesis?

    <p>To ensure both processes can be hormonally regulated</p> Signup and view all the answers

    What would be the consequence of concurrent glycogen breakdown and synthesis?

    <p>No net product would be formed</p> Signup and view all the answers

    How does epinephrine influence glycogen metabolism?

    <p>It activates phosphorylase a to degrade glycogen</p> Signup and view all the answers

    What does the release of hormones like adrenaline achieve in metabolism?

    <p>Quick response to immediate energy needs</p> Signup and view all the answers

    What is the significance of the energy-hydrolysis of pyrophosphate during glycogen synthesis?

    <p>It drives the reaction toward forming glucose products</p> Signup and view all the answers

    What are the products formed when xylulose 5-phosphate reacts with ribose 5-phosphate in the transketolase reaction?

    <p>Glyceraldehyde-3-phosphate and sedoheptulose 7-phosphate</p> Signup and view all the answers

    Which type of fragment does transaldolase transfer in its reaction?

    <p>Three carbon fragment from C-7 to C-3</p> Signup and view all the answers

    In the context of the pentose phosphate pathway, what is the role of thiamine pyrophosphate?

    <p>It serves as a coenzyme for transketolase.</p> Signup and view all the answers

    What stereochemical change occurs in the transketolase reaction to produce sedoheptulose 7-phosphate?

    <p>The C-1 carbonyl carbon of ribose 5-phosphate becomes a hydroxyl group on C-3.</p> Signup and view all the answers

    During which step does erythrose 4-phosphate react with xylulose 5-phosphate?

    <p>Final transketolase reaction</p> Signup and view all the answers

    What is the total number of carbon atoms produced from the reaction involving transaldolase?

    <p>8 carbon atoms</p> Signup and view all the answers

    Which key transformation occurs in the reversible transketolase reaction?

    <p>Conversion of C-5 to C-7 and C-3.</p> Signup and view all the answers

    Which intermediates are produced in the reaction between sedoheptulose 7-phosphate and glyceraldehyde 3-phosphate?

    <p>Erythrose 4-phosphate and fructose 6-phosphate</p> Signup and view all the answers

    What product is formed when glucose-1-P reacts with UTP in glycogen synthesis?

    <p>UDP-glucose</p> Signup and view all the answers

    What is released as a result of pyrophosphate hydrolysis in the glycogen synthesis process?

    <p>Two Pi</p> Signup and view all the answers

    Which enzyme is responsible for transferring a glucose unit from UDP-glucose to glycogen?

    <p>Glycogen synthetase</p> Signup and view all the answers

    Why is it necessary for glycogen breakdown and synthesis to involve different enzyme systems?

    <p>To prevent futile cycling</p> Signup and view all the answers

    What role do hormones play in the regulation of glycogen metabolism?

    <p>They regulate the activity of enzyme systems</p> Signup and view all the answers

    What is the net result of hormonal regulation in glycogen metabolism?

    <p>Prevention of futile cycles</p> Signup and view all the answers

    What is the consequence of epinephrine activating phosphorylase a in glycogen metabolism?

    <p>Enhanced glycogen breakdown</p> Signup and view all the answers

    What percentage of glucose units in glycogen is linked by 1-6 bonds?

    <p>10%</p> Signup and view all the answers

    What is the initial step catalyzed by UDP-glucose pyrophosphorylase in glycogen synthesis?

    <p>Formation of UDP-glucose from glucose-1-P and UTP</p> Signup and view all the answers

    Which enzyme converts glucose-1-P to glucose-6-P during glycogen degradation?

    <p>Phosphoglucomutase</p> Signup and view all the answers

    What is the main disadvantage of phosphorylase a in glycogen breakdown?

    <p>It cannot act on glucose units near 1,6-branch points.</p> Signup and view all the answers

    What is the role of the activated sugar nucleotide in glycogen synthesis?

    <p>To serve as a substrate for glucose storage</p> Signup and view all the answers

    Which of the following correctly describes the structure of glycogen?

    <p>A polymer with α-1,4 linked units and α-1,6 branches</p> Signup and view all the answers

    What process is essential for the conversion of glycogen back into glucose?

    <p>Hydrolysis</p> Signup and view all the answers

    What is required to synthesize glycogen from glucose?

    <p>Energy input and specific anabolic enzymes</p> Signup and view all the answers

    Which statement best describes phosphorylase a's action in glycogen metabolism?

    <p>It releases glucose-1-P from non-reducing ends of glycogen.</p> Signup and view all the answers

    What is the primary effect of epinephrine on glycogen synthase?

    <p>Inhibits glycogen synthase</p> Signup and view all the answers

    Which enzyme directly converts ATP to cyclic AMP?

    <p>Adenylate cyclase</p> Signup and view all the answers

    What is a characteristic feature of the regulatory cascade triggered by hormone binding?

    <p>Sequential enzyme activation</p> Signup and view all the answers

    In the regulatory cascade involving epinephrine, what happens to phosphorylase kinase?

    <p>It is activated by cyclic AMP</p> Signup and view all the answers

    What role does inorganic pyrophosphate play in the reaction facilitated by adenylate cyclase?

    <p>Is rapidly degraded to force product formation</p> Signup and view all the answers

    Which process is primarily affected by the activation of phosphorylase a?

    <p>Glycogen breakdown</p> Signup and view all the answers

    What is the main reason for the phosphorylation of glycogen phosphorylase by phosphorylase kinase?

    <p>To activate it for glycogen degradation</p> Signup and view all the answers

    What's the role of the pentose phosphate pathway compared to glycolysis?

    <p>It provides NADPH and pentose sugars</p> Signup and view all the answers

    What is the first product formed in the oxidative phase of the pentose phosphate pathway?

    <p>6-phosphoglucano-δ-lactone</p> Signup and view all the answers

    Which enzyme is responsible for converting 6-P-gluconate to ribulose 5-P?

    <p>6-P-Gluconate dehydrogenase</p> Signup and view all the answers

    Why does the pentose phosphate pathway continue beyond the oxidative phase?

    <p>To prevent the accumulation of ribulose 5-P</p> Signup and view all the answers

    Which two five-carbon compounds are produced from ribulose 5-P during the non-oxidative phase?

    <p>Ribose 5-P and Xylulose 5-P</p> Signup and view all the answers

    What happens to NADP+ during the first reaction of the oxidative phase?

    <p>It is oxidized to NADPH</p> Signup and view all the answers

    What is the primary outcome of the non-oxidative phase?

    <p>Producing intermediates for glycolysis</p> Signup and view all the answers

    How is ribulose 5-P eventually utilized during the non-oxidative phase?

    <p>Changed into intermediates that enter glycolysis</p> Signup and view all the answers

    What is the potential consequence of an excessive accumulation of ribulose 5-P in the cell?

    <p>Toxicity to the cell</p> Signup and view all the answers

    What is the structure formed as an unstable intermediate during the isomerization of ribulose 5-P to ribose 5-P?

    <p>Enediol intermediate</p> Signup and view all the answers

    What are the products formed during Mode 2 of the pentose phosphate pathway?

    <p>Two NADPH, one CO2, and one ribose 5-P</p> Signup and view all the answers

    During the non-oxidative phase of the pentose phosphate pathway, what conversion occurs involving ribose 5-P?

    <p>It is converted to xylulose 5-P</p> Signup and view all the answers

    What is necessary for the continuation of the pentose phosphate pathway beyond Mode 2?

    <p>Different ratios of NADPH and ribose 5-P</p> Signup and view all the answers

    Which characteristic of the non-oxidative reactions in the pentose phosphate pathway is highlighted?

    <p>They follow a relatively linear sequence</p> Signup and view all the answers

    Which enzyme is responsible for catalyzing the conversion of ribulose 5-P to ribose 5-P?

    <p>Phosphopentose isomerase</p> Signup and view all the answers

    In which reaction does ribulose 5-P change its chirality?

    <p>In the epimerase reaction to produce xylulose 5-P</p> Signup and view all the answers

    What can be considered a consequence of the isomerization reaction involving ribulose 5-P?

    <p>It results in the decay of an unstable intermediate</p> Signup and view all the answers

    What is the end result of the regulatory cascade triggered by epinephrine in terms of glycogen metabolism?

    <p>Inactivation of glycogen synthase</p> Signup and view all the answers

    Which step in the regulatory cascade involves the conversion of ATP to cyclic AMP?

    <p>Activation of adenylate cyclase</p> Signup and view all the answers

    What is a key feature of second messengers like cyclic AMP in cellular signaling?

    <p>They act as intracellular signaling agents</p> Signup and view all the answers

    How does the action of pyrophosphatase impact the reaction involving adenylate cyclase?

    <p>It facilitates the breakdown of a product to drive the reaction forward</p> Signup and view all the answers

    What product is formed when glucose-1-P reacts with UTP in glycogen synthesis?

    <p>UDP-glucose</p> Signup and view all the answers

    What is one of the main reasons for inactivating glycogen synthase during the epinephrine signaling cascade?

    <p>To prevent energy waste from futile cycles</p> Signup and view all the answers

    Which substance is released along with UDP-glucose during the transfer of a glucose unit to glycogen?

    <p>UDP</p> Signup and view all the answers

    What is the role of inorganic pyrophosphatase in glycogen synthesis?

    <p>To hydrolyze pyrophosphate (PPi)</p> Signup and view all the answers

    During the pentose phosphate pathway, what type of sugars are primarily generated?

    <p>Pentose sugars</p> Signup and view all the answers

    What is a key reason for using different enzyme systems for glycogen synthesis and breakdown?

    <p>To prevent a futile cycle of enzyme activity</p> Signup and view all the answers

    What happens to the reaction of adenylate cyclase once cyclic AMP is produced?

    <p>It is driven forward by the degradation of inorganic pyrophosphate</p> Signup and view all the answers

    Which of the following is true regarding the activation of phosphorylase kinase?

    <p>It is activated by cyclic AMP through the activation of a kinase</p> Signup and view all the answers

    How does the hydrolysis of pyrophosphate (PPi) impact glycogen synthesis?

    <p>It drives the reaction toward product formation</p> Signup and view all the answers

    What is the net result of hormonal regulation in glycogen metabolism?

    <p>Only one pathway is active at a time</p> Signup and view all the answers

    What is the primary action of adrenaline (epinephrine) on glycogen metabolism?

    <p>It activates catabolic enzymes</p> Signup and view all the answers

    Which statement about hormones is accurate?

    <p>They are organic compounds that exert effects after being transported in blood.</p> Signup and view all the answers

    What is the main structural characteristic of glycogen?

    <p>It has both α-1,4 and α-1,6 linked glucose units.</p> Signup and view all the answers

    Which enzyme is responsible for the initial cleavage of glycogen at non-reducing ends?

    <p>Phosphorylase a</p> Signup and view all the answers

    What is the product formed when glucose-1-P is converted by phosphoglucomutase?

    <p>Glucose-6-P</p> Signup and view all the answers

    Why is energy input necessary for glycogen synthesis?

    <p>Synthesis requires the activation of sugar nucleotides.</p> Signup and view all the answers

    What differentiates the enzymes used for glycogen synthesis from those used for degradation?

    <p>Different enzymes are utilized for anabolic and catabolic processes.</p> Signup and view all the answers

    What is the role of branching in glycogen structure?

    <p>It provides multiple non-reducing ends for enzyme action.</p> Signup and view all the answers

    Which of the following enzymes converts 1,6-branches into linear glucose units?

    <p>Transferase</p> Signup and view all the answers

    What is the predominant type of bond linking glucose units in glycogen?

    <p>α-1,4 linkage</p> Signup and view all the answers

    What product is generated from glucose 6-P during the first reaction of the oxidative phase?

    <p>6-phosphoglucano-δ-lactone</p> Signup and view all the answers

    What is the immediate result of the decarboxylation of 6-P-gluconate?

    <p>Ribulose 5-P</p> Signup and view all the answers

    Why does the pentose phosphate pathway continue beyond the oxidative phase?

    <p>To prevent toxic accumulation of ribulose 5-P</p> Signup and view all the answers

    Which enzyme catalyzes the conversion of 6-P-gluconate to ribulose 5-P?

    <p>6-P-Gluconate Dehydrogenase</p> Signup and view all the answers

    What are the five carbon compounds produced from ribulose 5-P in the non-oxidative stage?

    <p>Ribose 5-P and xylulose 5-P</p> Signup and view all the answers

    What consequence would occur if ribulose 5-P accumulates excessively in the cell?

    <p>Toxic effects on the cell</p> Signup and view all the answers

    Which reaction is coupled to the reduction of NADP+ to NADPH during the oxidative phase?

    <p>Decarboxylation of 6-P-gluconate</p> Signup and view all the answers

    During the non-oxidative phase, ribose 5-P and xylulose 5-P are ultimately converted to which of the following?

    <p>Fructose 6-P and glyceraldehyde 3-P</p> Signup and view all the answers

    What are the products of the transketolase reaction involving xylulose 5-phosphate and ribose 5-phosphate?

    <p>Glyceraldehyde-3-phosphate and sedoheptulose 7-phosphate</p> Signup and view all the answers

    Which enzyme catalyzes the transfer of a three-carbon fragment from sedoheptulose 7-phosphate to glyceraldehyde 3-phosphate?

    <p>Transaldolase</p> Signup and view all the answers

    How does the stereochemistry of sedoheptulose 7-phosphate derive from ribose 5-phosphate?

    <p>From the carbonyl carbon of ribose becoming a hydroxyl group on C-3 of sedoheptulose</p> Signup and view all the answers

    What is the function of thiamine pyrophosphate in the transketolase reaction?

    <p>To transfer a two-carbon fragment</p> Signup and view all the answers

    What is synthesized when erythrose 4-phosphate reacts with xylulose 5-phosphate in the final transketolase reaction?

    <p>Fructose 6-phosphate and glyceraldehyde-3-phosphate</p> Signup and view all the answers

    Which statement is true regarding the reversibility of the transketolase reaction?

    <p>The reaction is reversible under certain conditions in the pentose phosphate pathway.</p> Signup and view all the answers

    What type of compounds are ultimately produced from the series of reactions involving transketolase and transaldolase?

    <p>Compounds that can be metabolized in core reaction pathways</p> Signup and view all the answers

    Which of the following best describes the overall purpose of the reactions mentioned?

    <p>To produce metabolites for core reaction pathways</p> Signup and view all the answers

    What component of glycogen metabolism allows for the continued breakdown of glucose units near branch points?

    <p>Transferase and α-1,6-glucosidase enzymes</p> Signup and view all the answers

    Which enzyme is responsible for converting glucose-1-P to glucose-6-P in glycogen metabolism?

    <p>Phosphoglucomutase</p> Signup and view all the answers

    What primary feature of glycogen contributes to its quick mobilization as an energy source?

    <p>Extensive branching of the glycogen molecule</p> Signup and view all the answers

    In glycogen synthesis, which process involves the formation of an activated sugar nucleotide intermediate?

    <p>Formation of UDP-glucose</p> Signup and view all the answers

    Why is energy input necessary for glycogen synthesis compared to its breakdown?

    <p>Breakdown of glycogen is an energy-releasing reaction</p> Signup and view all the answers

    What type of linkage predominates in the structure of glycogen?

    <p>α-1,4 glycosidic linkages</p> Signup and view all the answers

    What is the main function of the pentose pathway related to NADPH?

    <p>To provide reducing power for anabolic reactions</p> Signup and view all the answers

    Which of the following correctly describes the enzymatic action of phosphorylase a in glycogen metabolism?

    <p>It cleaves non-reducing ends to release glucose-1-P</p> Signup and view all the answers

    What is the effect of cyclic AMP on phosphorylase kinase during glycogen breakdown?

    <p>It activates its activity.</p> Signup and view all the answers

    How does the inactivation of glycogen synthase by epinephrine prevent futile cycles?

    <p>By simultaneously promoting glycogen breakdown.</p> Signup and view all the answers

    Which of the following accurately describes the role of adenylate cyclase in the regulatory cascade?

    <p>It converts ATP to cyclic AMP.</p> Signup and view all the answers

    What is the significance of the rapid degradation of inorganic pyrophosphate in the adenylate cyclase reaction?

    <p>It drives the reaction toward product formation.</p> Signup and view all the answers

    Which enzyme directly catalyzes the conversion of phosphorylase b to phosphorylase a?

    <p>Phosphorylase kinase.</p> Signup and view all the answers

    Which feature distinguishes the pentose phosphate pathway from glycolysis?

    <p>It produces NADPH for reductive biosynthesis.</p> Signup and view all the answers

    What is the consequence of the simultaneous activation of glycogen breakdown and inactivation of glycogen synthesis during the epinephrine cascade?

    <p>Increased glucose availability for energy.</p> Signup and view all the answers

    In which cellular compartment does the pentose phosphate pathway occur?

    <p>Cytosol.</p> Signup and view all the answers

    What type of intermediate is formed during the isomerization of ribulose 5-P to ribose 5-P?

    <p>Enediol intermediate</p> Signup and view all the answers

    Which product is NOT typically generated from the oxidative phase of the pentose phosphate pathway?

    <p>Xylulose 5-phosphate</p> Signup and view all the answers

    What is the main reducing agent utilized in anabolic pathways?

    <p>NADPH</p> Signup and view all the answers

    What is the main enzymatic activity involved in the conversion of ribose 5-P to xylulose 5-P?

    <p>Phosphopentose epimerase</p> Signup and view all the answers

    What is the consequence of the cell's need for NADPH and ribose 5-P in different ratios?

    <p>Two separate pathways are necessary</p> Signup and view all the answers

    Which of the following best describes the first phase of the pentose phosphate pathway?

    <p>Includes oxidative reactions producing NADPH</p> Signup and view all the answers

    What happens to ribulose 5-P when produced in excess during the oxidative phase?

    <p>It is converted to glucose 6-P</p> Signup and view all the answers

    What characteristic feature do enediol intermediates share in both the pentose phosphate pathway and glycolysis?

    <p>Existence as unstable compounds</p> Signup and view all the answers

    Which products are directly formed from the non-oxidative phase of the pentose phosphate pathway?

    <p>Fructose 6-P and Glyceraldehyde 3-P</p> Signup and view all the answers

    Which reaction marks the completion of the oxidative phase of the pentose phosphate pathway?

    <p>Formation of ribose 5-P</p> Signup and view all the answers

    Which enzyme catalyzes the reaction that converts ribulose 5-phosphate to ribose 5-phosphate?

    <p>Phosphopentose isomerase</p> Signup and view all the answers

    The oxidative phase of the pentose phosphate pathway results in the reduction of which cofactor?

    <p>NADP+</p> Signup and view all the answers

    In what phase of the pentose phosphate pathway is xylulose 5-P produced?

    <p>Non-oxidative phase</p> Signup and view all the answers

    Which of the following intermediates is NOT produced during the non-oxidative phase of the pentose phosphate pathway?

    <p>Pyruvate</p> Signup and view all the answers

    What is the net reaction of the oxidative phase of the pentose phosphate pathway?

    <p>Glucose 6-P + 2 NADP+ + H2O -&gt; Ribulose 5-P + 2 NADPH + 2 H+ + CO2</p> Signup and view all the answers

    During the non-oxidative phase, which two five-carbon sugars are primarily interconverted?

    <p>Xylulose 5-P and Ribose 5-P</p> Signup and view all the answers

    What is the first product formed when glucose 6-P is oxidized in the oxidative phase?

    <p>6-phosphoglucano-δ-lactone</p> Signup and view all the answers

    Which enzyme catalyzes the conversion of 6-phosphoglucano-δ-lactone to 6-P-gluconate?

    <p>Lactonase</p> Signup and view all the answers

    Why does the oxidative phase of the pentose phosphate pathway stop after synthesizing NADPH?

    <p>There is an accumulation of ribulose 5-P</p> Signup and view all the answers

    What is the main purpose of the non-oxidative phase of the pentose phosphate pathway?

    <p>To convert ribulose 5-P into glycolytic intermediates</p> Signup and view all the answers

    After the oxidative phase, which compound is decarboxylated and oxidized to form ribulose 5-P?

    <p>6-P-gluconate</p> Signup and view all the answers

    Which two five-carbon compounds are produced during the conversion of ribulose 5-P in the non-oxidative stage?

    <p>Ribose 5-P and Xylulose 5-P</p> Signup and view all the answers

    In the non-oxidative phase, what is the outcome of the series of three reactions involving ribose 5-P and xylulose 5-P?

    <p>Formation of Fructose 6-P and Glyceraldehyde 3-P</p> Signup and view all the answers

    Which of the following accurately describes the function of glucose 6-P dehydrogenase in the oxidative phase?

    <p>It catalyzes the coupling of NADP+ reduction to glucose oxidation</p> Signup and view all the answers

    What is the primary role of phosphorylase a in glycogen metabolism?

    <p>It releases glucose-1-P from non-reducing ends of glycogen.</p> Signup and view all the answers

    What is the structure of glycogen primarily composed of?

    <p>α-1,4 linked glucose units with α-1,6 branches.</p> Signup and view all the answers

    What transformation allows phosphorylase a to continue breaking down glycogen?

    <p>Conversion of 1,6 branches into linear 1,4-linked glucose.</p> Signup and view all the answers

    Which process is essential for the synthesis of glycogen from glucose?

    <p>Formation of UDP-glucose as an activated precursor.</p> Signup and view all the answers

    How does the enzymatic structure of glycogen enable its rapid mobilization?

    <p>The numerous branching points create many non-reducing ends.</p> Signup and view all the answers

    What percentage of the glycogen polymer is composed of 1-4 linked glucose units?

    <p>90%</p> Signup and view all the answers

    What type of enzymatic reaction does phosphoglucomutase catalyze?

    <p>Conversion of glucose-6-P to glucose-1-P.</p> Signup and view all the answers

    Which statement about glycogen synthesis compared to glycogen degradation is accurate?

    <p>Glycogen synthesis requires energy input, while degradation is energy releasing.</p> Signup and view all the answers

    What is the primary purpose of the regulatory cascade involving epinephrine in glycogen metabolism?

    <p>To activate glycogen breakdown while inhibiting glycogen synthesis</p> Signup and view all the answers

    What role does cyclic AMP play in the regulatory cascade?

    <p>It acts as a second messenger activating protein kinases</p> Signup and view all the answers

    Which of the following statements accurately describes the action of adenylate cyclase?

    <p>It catalyzes the conversion of ATP to cyclic AMP and is irreversible due to pyrophosphate degradation</p> Signup and view all the answers

    In the context of glycogen metabolism, what is the result of phosphorylase a activity?

    <p>Cleavage of glycogen to release glucose-1-phosphate</p> Signup and view all the answers

    Which component of the regulatory cascade is responsible for phosphorylating phosphorylase b to phosphorylase a?

    <p>Cyclic AMP-sensitive kinase</p> Signup and view all the answers

    What is a consequence of the dual functionality of epinephrine in glycogen metabolism?

    <p>It prevents futile cycles by activating breakdown and inhibiting synthesis</p> Signup and view all the answers

    During the oxidative phase of the pentose phosphate pathway, what is primarily produced from glucose-6-phosphate?

    <p>NADPH and ribulose-5-phosphate</p> Signup and view all the answers

    What distinguishes the pentose phosphate pathway from glycolysis?

    <p>It generates NADPH for reductive biosynthesis</p> Signup and view all the answers

    What characterizes the unstable endiol intermediate in the isomerization reaction of ribulose 5-P?

    <p>It features two adjacent carbon-atom-carrying hydroxyl groups linked by a double bond.</p> Signup and view all the answers

    What does the non-oxidative phase of the pentose phosphate pathway primarily achieve?

    <p>Interconversion of sugar phosphates to meet various cellular needs.</p> Signup and view all the answers

    What is the primary function of phosphopentose epimerase in the non-oxidative phase?

    <p>To catalyze the conversion of ribose 5-P to xylulose 5-P.</p> Signup and view all the answers

    How does the need for NADPH and ribose 5-P typically vary in a cell?

    <p>They are often required in different ratios depending on the metabolic context.</p> Signup and view all the answers

    What reaction is essential for the isomerization of ribulose 5-P to ribose 5-P?

    <p>Enediol formation.</p> Signup and view all the answers

    Which interaction is similar in the mechanisms of isomerase reactions seen in both the pentose phosphate pathway and glycolysis?

    <p>They both involve enediol intermediates.</p> Signup and view all the answers

    What role does transketolase play in the non-oxidative phase of the pentose phosphate pathway?

    <p>Facilitates the transfer of carbon units between sugar phosphates.</p> Signup and view all the answers

    In the context of the pentose phosphate pathway, what is one limitation of stopping the process after the oxidative phase?

    <p>Lack of necessary reducing power for anabolic reactions.</p> Signup and view all the answers

    What compound is produced directly after the action of glucose 6-P dehydrogenase in the oxidative phase?

    <p>6-phosphoglucano-δ-lactone</p> Signup and view all the answers

    Which enzyme is responsible for converting the lactone form to the open chain carboxylic acid during the oxidative phase?

    <p>Lactonase</p> Signup and view all the answers

    Why does the oxidative phase of the pentose pathway conclude after the synthesis of NADPH?

    <p>Accumulation of ribulose 5-P becomes toxic for the cell.</p> Signup and view all the answers

    What is the final product of the decarboxylation of 6-P-gluconate?

    <p>Ribulose 5-P</p> Signup and view all the answers

    Which of the following best describes the main function of the non-oxidative stage of the pentose pathway?

    <p>To convert ribulose 5-P into various glycolysis intermediates.</p> Signup and view all the answers

    During the non-oxidative phase, which two compounds are produced from ribulose 5-P?

    <p>Ribose 5-P and xylulose 5-P</p> Signup and view all the answers

    What series of transformations occur after ribulose 5-P is converted into its five-carbon compounds?

    <p>They are further processed to glyceraldehyde 3-P and fructose 6-P.</p> Signup and view all the answers

    In the context of the pentose phosphate pathway, what typically happens if there is an excess of ribulose 5-P?

    <p>It might lead to toxic levels within the cell.</p> Signup and view all the answers

    What is the significance of the hydrolysis of pyrophosphate (PPi) in glycogen synthesis?

    <p>It provides energy that drives the reaction toward product formation.</p> Signup and view all the answers

    Which statement about the roles of enzymes in glycogen breakdown and synthesis is accurate?

    <p>Different enzymes allow for independent regulation of both processes.</p> Signup and view all the answers

    Why is it necessary for the breakdown and synthesis of glycogen to be energy-releasing processes?

    <p>To drive the reactions toward product formation effectively.</p> Signup and view all the answers

    Which of the following statements best describes the role of adrenaline in glycogen metabolism?

    <p>It activates enzymes responsible for glycogen breakdown.</p> Signup and view all the answers

    During glycogen synthesis, what compound is produced along with UDP-glucose when glucose-1-P reacts with UTP?

    <p>Pyrophosphate (PPi)</p> Signup and view all the answers

    What could be a potential consequence of simultaneous activity of glycogen synthesis and breakdown?

    <p>A futile cycle leading to energy wastage.</p> Signup and view all the answers

    Which enzyme facilitates the transfer of glucose from UDP-glucose to the growing glycogen chain?

    <p>Glycogen synthase</p> Signup and view all the answers

    What is the primary effect of hormonal regulation on glycogen metabolism?

    <p>To ensure that only one pathway is active at any given time.</p> Signup and view all the answers

    What starting material is primarily oxidized in the oxidative phase of the pentose phosphate pathway?

    <p>Glucose 6-P</p> Signup and view all the answers

    Which product is synthesized from glucose 6-phosphate during the oxidative phase of the pentose phosphate pathway?

    <p>Ribulose 5-phosphate</p> Signup and view all the answers

    What main product results from the non-oxidative phase after converting excess ribulose 5-phosphate?

    <p>Pyruvate</p> Signup and view all the answers

    Which cofactors are generated during the oxidative part of the pentose phosphate pathway?

    <p>NADPH and carbon dioxide</p> Signup and view all the answers

    In mode 4 of the pentose phosphate pathway, what primary need does the cell have?

    <p>NADPH and ATP without ribose-5-phosphate</p> Signup and view all the answers

    Which of the following correctly describes the outcome of the oxidative reactions in the pentose phosphate pathway?

    <p>It generates reducing power in the form of NADPH.</p> Signup and view all the answers

    During which phase of the pentose phosphate pathway does the conversion of five-carbon sugars occur?

    <p>Non-oxidative phase</p> Signup and view all the answers

    What happens when ribulose 5-phosphate is in excess after the oxidative phase?

    <p>It gets converted back to glucose 6-P.</p> Signup and view all the answers

    What is the initial substrate for the reaction catalyzed by glucose 6-P dehydrogenase?

    <p>Glucose 6-P</p> Signup and view all the answers

    What type of compound is formed by the action of lactonase on 6-phosphoglucono-δ-lactone?

    <p>6-P-gluconate</p> Signup and view all the answers

    What is produced directly after the decarboxylation of 6-P-gluconate?

    <p>Ribulose 5-P</p> Signup and view all the answers

    Which enzyme is responsible for the conversion of ribulose 5-P into ribose 5-P?

    <p>Phosphopentose isomerase</p> Signup and view all the answers

    What happens to ribulose 5-P if the pentose phosphate pathway stops after the oxidative phase?

    <p>It accumulates, potentially becoming toxic to the cell.</p> Signup and view all the answers

    Which statement correctly describes the purpose of the non-oxidative phase of the pentose phosphate pathway?

    <p>To convert ribulose 5-P into other useful metabolites.</p> Signup and view all the answers

    What is the end result of the series of five reactions in the non-oxidative phase?

    <p>Formation of glyceraldehyde 3-P and fructose 6-P.</p> Signup and view all the answers

    Which of the following compounds is a product of the oxidative phase of the pentose phosphate pathway?

    <p>NADPH</p> Signup and view all the answers

    Which of the following accurately describes the function of adenylate cyclase in the regulatory cascade?

    <p>It catalyzes the conversion of ATP to cyclic AMP.</p> Signup and view all the answers

    What role does the cleavage of glycogen by phosphorylase a play in glycogen metabolism?

    <p>It releases glucose-1-P for energy production.</p> Signup and view all the answers

    Which statement about the dual function of the epinephrine cascade in glycogen metabolism is incorrect?

    <p>It promotes glycogen synthesis.</p> Signup and view all the answers

    What impact does the rapid degradation of inorganic pyrophosphate have on the adenylate cyclase reaction?

    <p>It drives the reaction toward product formation.</p> Signup and view all the answers

    Which of the following correctly characterizes the location of the reactions involved in the pentose phosphate pathway?

    <p>The reactions occur in the cytosol.</p> Signup and view all the answers

    Which enzyme is responsible for converting phosphorylase b to phosphorylase a?

    <p>Phosphorylase kinase.</p> Signup and view all the answers

    Which feature is essential for preventing a futile cycle during the activation of glycogen catabolism?

    <p>Inactivation of glycogen synthase alongside the activation of glycogen phosphorylase.</p> Signup and view all the answers

    What is a significant outcome of cyclic AMP activation of protein kinase?

    <p>It leads to the breakdown of glycogen through downstream signaling.</p> Signup and view all the answers

    What is the unstable intermediate formed during the isomerization of ribulose 5-P to ribose 5-P?

    <p>Endiol</p> Signup and view all the answers

    What characterizes the conversion of ribose 5-P to xylulose 5-P in the non-oxidative phase?

    <p>It involves an epimerase reaction.</p> Signup and view all the answers

    Why can the pentose phosphate pathway have different modes beyond Mode 2?

    <p>Different cellular conditions may alter the requirement for NADPH and ribose 5-P.</p> Signup and view all the answers

    What type of reaction facilitates the transition from ribulose 5-P to ribose 5-P?

    <p>Isomerization</p> Signup and view all the answers

    Which step is NOT associated with the oxidative phase of the pentose phosphate pathway?

    <p>Production of xylulose 5-P</p> Signup and view all the answers

    Which of the following statements best describes the mechanism of phosphopentose isomerase?

    <p>It uses a similar mechanism to phosphoglucose isomerase.</p> Signup and view all the answers

    Which product results from the isomerization of ribulose 5-P to ribose 5-P?

    <p>Ribose 5-P</p> Signup and view all the answers

    Which intermediate is generated during the isomerization reaction involving ribulose 5-P?

    <p>Enediol</p> Signup and view all the answers

    What are the products formed when transketolase transfers a two carbon fragment from xylulose 5-phosphate to ribose 5-phosphate?

    <p>Glyceraldehyde-3-phosphate and Sedoheptulose 7-phosphate</p> Signup and view all the answers

    What structural feature of sedoheptulose 7-phosphate is derived from ribose 5-phosphate?

    <p>C-1 carbonyl carbon becomes a hydroxyl group on C-3 with left orientation</p> Signup and view all the answers

    During the transaldolase reaction, what is transferred from sedoheptulose 7-phosphate to glyceraldehyde 3-phosphate?

    <p>A three-carbon fragment</p> Signup and view all the answers

    What products are yielded when erythrose 4-phosphate reacts with xylulose 5-phosphate in the final transketolase reaction?

    <p>Fructose 6-phosphate and Glyceraldehyde-3-phosphate</p> Signup and view all the answers

    Which coenzyme is essential for transketolase to facilitate the transfer of carbon fragments?

    <p>Thiamine pyrophosphate (TPP)</p> Signup and view all the answers

    In the context of the pentose phosphate pathway, why is the transketolase reaction considered reversible?

    <p>It can switch direction depending on metabolic needs.</p> Signup and view all the answers

    Which of the following correctly describes the conversion occurring in the transaldolase step?

    <p>One C-7 and one C-3 compound to one C-4 and one C-6 compound</p> Signup and view all the answers

    What is the main purpose of the unusual reactions in the pentose phosphate pathway?

    <p>To produce intermediates for core metabolic pathways.</p> Signup and view all the answers

    What is the effect of hydrolyzing pyrophosphate (PPi) in glycogen synthesis?

    <p>It provides energy that drives the overall reaction toward product formation.</p> Signup and view all the answers

    Which enzyme is responsible for transferring a glucose unit during glycogen synthesis?

    <p>Glycogen synthetase</p> Signup and view all the answers

    What happens if the breakdown and synthesis of glycogen occur simultaneously?

    <p>It results in a futile cycle of enzyme activity.</p> Signup and view all the answers

    How is hormonal regulation significant to glycogen metabolism?

    <p>It ensures only one pathway operates at a time.</p> Signup and view all the answers

    What is the role of adrenaline (epinephrine) in glycogen metabolism?

    <p>It stimulates the activation of glycogen degradation enzymes.</p> Signup and view all the answers

    What is produced when glucose-1-P reacts with UTP in the first step of glycogen synthesis?

    <p>UDP-glucose</p> Signup and view all the answers

    What defines hormones in the context of metabolic processes?

    <p>They are organic compounds synthesized in one tissue and transported to another.</p> Signup and view all the answers

    Which process is characterized by the release of inorganic phosphate (Pi) from pyrophosphate (PPi)?

    <p>Glycogen synthesis</p> Signup and view all the answers

    Which event occurs directly after the activation of adenylate cyclase in the regulatory cascade?

    <p>The conversion of ATP to Cyclic AMP</p> Signup and view all the answers

    What is the primary function of the cyclic AMP-sensitive kinase in the glycogen breakdown process?

    <p>To phosphorylate phosphorylase kinase</p> Signup and view all the answers

    What role does inorganic pyrophosphate play in the reactions catalyzed by adenylate cyclase?

    <p>It promotes the breakdown of the reaction products</p> Signup and view all the answers

    Which statement accurately reflects the outcome of the epinephrine cascade on glycogen metabolism?

    <p>It prevents glycogen synthesis while promoting breakdown</p> Signup and view all the answers

    Which process describes the conversion of phosphorylase b to phosphorylase a?

    <p>Phosphorylation by phosphorylase kinase</p> Signup and view all the answers

    Which stage of the pentose phosphate pathway generates NADPH?

    <p>Oxidative phase</p> Signup and view all the answers

    Which compound primarily determines the direction of the reaction catalyzed by adenylate cyclase?

    <p>Inorganic pyrophosphate</p> Signup and view all the answers

    What is suggested by the term 'futile cycle' in the context of metabolic pathways like glycogen metabolism?

    <p>Simultaneous activation of both synthesis and breakdown pathways</p> Signup and view all the answers

    Which enzyme catalyzes the conversion of glucose 6-P to 6-phosphoglucano-δ-lactone?

    <p>Glucose 6-P Dehydrogenase</p> Signup and view all the answers

    What product is formed from the decarboxylation and oxidation of 6-P-gluconate?

    <p>Ribulose 5-P</p> Signup and view all the answers

    Why would the pathway not stop after the synthesis of NADPH?

    <p>Accumulation of ribulose 5-P could become toxic.</p> Signup and view all the answers

    What is primarily produced during the oxidative phase of the pentose phosphate pathway?

    <p>NADPH</p> Signup and view all the answers

    What happens to ribulose 5-P during the non-oxidative phase?

    <p>It is converted into useful intermediates like glyceraldehyde 3-P.</p> Signup and view all the answers

    Which form of the pentose phosphate pathway is active when a cell needs both NADPH and ATP?

    <p>Mode 4</p> Signup and view all the answers

    Which of the following accurately describes the non-oxidative phase of the pentose phosphate pathway?

    <p>It involves the conversion of five-carbon sugars into intermediates of the TCA cycle.</p> Signup and view all the answers

    Which two five-carbon compounds are directly formed from ribulose 5-P?

    <p>Ribose 5-P and Xylulose 5-P</p> Signup and view all the answers

    What are the final products produced in the non-oxidative stage of the pentose pathway?

    <p>Fructose 6-P and Glyceraldehyde 3-P</p> Signup and view all the answers

    What happens to ribulose 5-phosphate after reaching excess amounts post-oxidative phase?

    <p>It is converted back into its precursor, glucose-6-phosphate.</p> Signup and view all the answers

    Which enzyme is responsible for converting the lactone to the open chain carboxylic acid during the oxidative phase?

    <p>Lactonase</p> Signup and view all the answers

    In the oxidative phase of the pentose phosphate pathway, which enzyme catalyzes the conversion of glucose-6-phosphate to ribulose-5-phosphate?

    <p>Glucose-6-phosphate dehydrogenase</p> Signup and view all the answers

    What is the function of NADP+ in the oxidative phase of the pentose pathway?

    <p>It is reduced to NADPH during the process.</p> Signup and view all the answers

    What is the fate of the reducing power provided by NADPH in anabolic pathways?

    <p>It is utilized in biosynthetic reactions.</p> Signup and view all the answers

    During which phase of the pentose phosphate pathway is the net reaction of converting glucose-6-phosphate resultantly producing NADPH?

    <p>Oxidative phase</p> Signup and view all the answers

    Which two five-carbon sugars are primarily converted into fructose 6-P and glyceraldehyde 3-P during the non-oxidative phase?

    <p>Xylulose 5-P and ribose 5-P</p> Signup and view all the answers

    What type of intermediate is formed during the isomerization of ribulose 5-P to ribose 5-P?

    <p>Enediol</p> Signup and view all the answers

    Which molecule is produced during the oxidative phase of the pentose phosphate pathway along with NADPH?

    <p>Ribose 5-phosphate</p> Signup and view all the answers

    What is the primary function of phosphopentose epimerase in the non-oxidative phase?

    <p>Convert ribose 5-P to xylulose 5-P</p> Signup and view all the answers

    Which reaction involves the decay of an unstable intermediate into a stable aldehyde?

    <p>Isomerization of ribulose 5-P</p> Signup and view all the answers

    In the context of the pentose phosphate pathway, what is the significance of non-oxidative reactions?

    <p>They allow for the production of sugars in different ratios</p> Signup and view all the answers

    Which of the following best describes the sequence of reactions before the non-oxidative phase of the pentose phosphate pathway?

    <p>Linear and more-or-less easy to follow</p> Signup and view all the answers

    What common feature is shared by the isomerization reactions discussed, including that of ribulose 5-P?

    <p>Presence of enediol intermediates</p> Signup and view all the answers

    What change occurs to the ribose 5-P during the epimerization process?

    <p>Changing the chirality of the hydroxyl group at carbon 3</p> Signup and view all the answers

    What is the product of the reaction catalyzed by UDP-glucose pyrophosphorylase?

    <p>UDP-glucose</p> Signup and view all the answers

    What role does the hydrolysis of pyrophosphate (PPi) play in the glycogen synthesis process?

    <p>It helps in driving the reaction towards substrate formation.</p> Signup and view all the answers

    Which statement accurately describes the relationship between glycogen synthesis and breakdown?

    <p>Different enzyme systems prevent a futile cycle of activity.</p> Signup and view all the answers

    What is the primary function of hormones in metabolic processes?

    <p>They exert effects on other tissues after being synthesized in one tissue.</p> Signup and view all the answers

    What structural feature of glycogen allows for rapid mobilization of glucose units during metabolism?

    <p>Extensive branching and many non-reducing ends</p> Signup and view all the answers

    During glycogen degradation, which type of glucose linkage poses a challenge for phosphorylase a?

    <p>α-1,6 linkage</p> Signup and view all the answers

    What is the immediate effect of epinephrine on glycogen metabolism?

    <p>It activates the catabolic enzyme phosphorylase a.</p> Signup and view all the answers

    What is the main purpose of the enzyme phosphoglucomutase in glycogen metabolism?

    <p>To convert glucose-1-P to glucose-6-P</p> Signup and view all the answers

    What can be inferred about the net hydrolysis during one cycle of glycogen metabolism?

    <p>It represents a net consumption of one ATP equivalent.</p> Signup and view all the answers

    What is the consequence of the dual function of hormone signaling on glycogen metabolism?

    <p>It ensures coordinated regulation of both breakdown and synthesis.</p> Signup and view all the answers

    What must occur for the synthesis of glycogen to proceed after its breakdown?

    <p>Involvement of a sugar nucleotide intermediate</p> Signup and view all the answers

    How does the synthesis of UDP-glucose relate to glycogen storage?

    <p>It provides a glucose donor for the synthesis of glycogen.</p> Signup and view all the answers

    Which of these statements regarding glycogen structure is true?

    <p>About 90% of its structure consists of 1-4 linked glucose units</p> Signup and view all the answers

    What is the result of enzymatic action at the non-reducing ends of glycogen by phosphorylase a?

    <p>Formation of glucose-1-P from α-1,4 links</p> Signup and view all the answers

    Why does glycogen synthesis require energy input, despite being the reverse of glycogen breakdown?

    <p>The breakdown is an exergonic process</p> Signup and view all the answers

    Which type of enzyme is responsible for converting the 1,6-branches of glycogen into linear 1,4-linked glucose units?

    <p>Transferase enzyme</p> Signup and view all the answers

    What is the ultimate effect of the regulatory cascade initiated by the binding of epinephrine?

    <p>Inactivates glycogen synthase while activating glycogen breakdown</p> Signup and view all the answers

    Which key feature differentiates the action of adenylate cyclase in the regulatory cascade?

    <p>It produces a second messenger that activates protein kinases</p> Signup and view all the answers

    What is the significance of the irreversible nature of the adenylate cyclase reaction?

    <p>It ensures sustained levels of cyclic AMP after hormone binding</p> Signup and view all the answers

    During which specific phase of the pentose phosphate pathway is NADPH primarily generated?

    <p>Oxidative phase</p> Signup and view all the answers

    What distinguishes phosphorylase a from phosphorylase b in the context of glycogen metabolism?

    <p>Phosphorylase a is active and promotes glycogen breakdown</p> Signup and view all the answers

    Which statement accurately describes the consequences of the regulatory cascade involving glycogen synthase?

    <p>It triggers the inactivation of glycogen synthase</p> Signup and view all the answers

    In the pentose phosphate pathway, what role do pentose sugars play in relation to glycolysis?

    <p>They act as intermediates that link with glycolysis and gluconeogenesis</p> Signup and view all the answers

    What intermediate forms during the isomerization of ribulose 5-P to ribose 5-P?

    <p>Enediol</p> Signup and view all the answers

    Which explanation best describes the function of second messengers in hormonal signaling?

    <p>They amplify the hormone binding signal within the cell</p> Signup and view all the answers

    Which two products are generated during the oxidative phase of the pentose phosphate pathway?

    <p>NADPH and carbon dioxide</p> Signup and view all the answers

    What is the main purpose of the non-oxidative phase of the pentose phosphate pathway?

    <p>Convert sugar phosphate intermediates into glycolytic pathway intermediates</p> Signup and view all the answers

    What is the role of the epimerase enzyme in the pentose phosphate pathway?

    <p>Alteration of chirality at the carbon 3 position</p> Signup and view all the answers

    What type of reactions are primarily involved in the oxidative phase of the pentose phosphate pathway?

    <p>Reduction and oxidation reactions</p> Signup and view all the answers

    How does the isomerase reaction in the pentose phosphate pathway compare to similar reactions in glycolysis?

    <p>It is exactly analogous, involving enediol intermediates</p> Signup and view all the answers

    What is the outcome if the pentose phosphate pathway stops after synthesizing NADPH?

    <p>Accumulation of ribose 5-phosphate</p> Signup and view all the answers

    In the context of the pentose phosphate pathway, what is ribulose 5-P's fate after the oxidative phase if it is in excess?

    <p>It is metabolized through the non-oxidative phase</p> Signup and view all the answers

    What are the products formed from the transketolase reaction involving xylulose 5-phosphate and ribose 5-phosphate?

    <p>Glyceraldehyde-3-phosphate and sedoheptulose 7-phosphate</p> Signup and view all the answers

    Which statement accurately describes the transformation of ribose 5-phosphate in synthesizing sedoheptulose 7-phosphate?

    <p>C-1 carbonyl carbon becomes a hydroxyl group on C-3 with left orientation</p> Signup and view all the answers

    What functional role does thiamine pyrophosphate play in the transketolase reaction?

    <p>It acts as a coenzyme for carbon transfer</p> Signup and view all the answers

    In the transaldolase reaction, which two compounds are transformed into erythrose 4-phosphate and fructose 6-phosphate?

    <p>Sedoheptulose 7-phosphate and glyceraldehyde 3-phosphate</p> Signup and view all the answers

    How many carbons does the newly formed sedoheptulose 7-phosphate have after its synthesis?

    <p>Seven carbons</p> Signup and view all the answers

    What unique aspect characterizes the reverse function of transketolase in the pentose phosphate pathway?

    <p>It produces different end products than initial reactants</p> Signup and view all the answers

    Which of the following correctly describes the final reaction of transketolase involving erythrose 4-phosphate and a second xylulose 5-phosphate?

    <p>It leads to the formation of glyceraldehyde-3-phosphate and fructose 6-phosphate</p> Signup and view all the answers

    What is the importance of the conversions happening in the pentose phosphate pathway as described?

    <p>They create intermediates for core metabolic pathways</p> Signup and view all the answers

    What is the primary enzyme that converts ATP to cyclic AMP in the regulatory cascade?

    <p>Adenylate cyclase</p> Signup and view all the answers

    Which feature of the regulatory cascade prevents the energy wastage associated with simultaneous glycogen breakdown and synthesis?

    <p>Inactivation of glycogen synthase</p> Signup and view all the answers

    What is the effect of the enzymatic action of cyclic AMP-sensitive kinases on phosphorylase b?

    <p>Conversion to phosphorylase a</p> Signup and view all the answers

    Which compound serves as a second messenger synthesized in response to hormone activation?

    <p>Cyclic AMP</p> Signup and view all the answers

    During which phase of the pentose phosphate pathway is NADPH primarily generated?

    <p>Oxidative phase</p> Signup and view all the answers

    What role does inorganic pyrophosphate play in the adenylate cyclase reaction?

    <p>Facilitates the irreversible reaction</p> Signup and view all the answers

    How does the pentose phosphate pathway contribute to cellular metabolism?

    <p>By providing NADPH for biosynthetic reactions</p> Signup and view all the answers

    Which enzyme initiates the cleavage of glycogen in the regulatory cascade?

    <p>Phosphorylase a</p> Signup and view all the answers

    What is the composition of glycogen in terms of glucose linkages?

    <p>90% 1-4 linked and 10% 1-6 linked</p> Signup and view all the answers

    What is the primary function of the enzyme phosphorylase a in glycogen metabolism?

    <p>It cleaves glycogen releasing glucose-1-P from non-reducing ends</p> Signup and view all the answers

    How does glycogen synthesis differ from glycogen degradation?

    <p>Synthesis requires energy, while degradation is energy releasing</p> Signup and view all the answers

    What intermediate is formed during glycogen synthesis?

    <p>UDP-glucose</p> Signup and view all the answers

    What occurs to glucose-1-P after it is cleaved from glycogen?

    <p>It is converted to glucose-6-P by phosphoglucomutase</p> Signup and view all the answers

    What is the enzyme responsible for converting the 1,6 branches of glycogen into linear glucose units?

    <p>α-1,6-glucosidase</p> Signup and view all the answers

    Why is the branching structure of glycogen important for its function?

    <p>It provides multiple non-reducing ends for rapid glucose release</p> Signup and view all the answers

    What happens to the glucose units that are cleaved by phosphorylase a when they reach a 1,6 branch?

    <p>They can no longer be processed further by phosphorylase a</p> Signup and view all the answers

    What is the unstable intermediate formed during the isomerization of ribulose 5-P to ribose 5-P?

    <p>Enediol</p> Signup and view all the answers

    What is produced during the oxidative phase of the pentose phosphate pathway?

    <p>Two molecules of NADPH, one molecule of carbon dioxide, and one molecule of ribose 5-phosphate</p> Signup and view all the answers

    Which enzyme catalyzes the conversion of ribose 5-P to xylulose 5-P during the non-oxidative phase?

    <p>Phosphopentose epimerase</p> Signup and view all the answers

    What factor influences the need for different modes of the pentose phosphate pathway?

    <p>Variable ratios of NADPH and ribose 5-phosphate usage</p> Signup and view all the answers

    Which isomerization mechanism is directly analogous to that of the phosphopentose isomerase?

    <p>Triose phosphate isomerase mechanism</p> Signup and view all the answers

    What happens to the enediol intermediate formed during the isomerization reaction?

    <p>It converts into an aldehyde</p> Signup and view all the answers

    How does the conversion of ribulose 5-phosphate to xylulose 5-phosphate specifically change its structure?

    <p>Changes the chirality of a hydroxyl group</p> Signup and view all the answers

    What defines the non-oxidative phase of the pentose phosphate pathway?

    <p>It involves the transformation of five-carbon sugars into intermediates</p> Signup and view all the answers

    What is the product of the first reaction catalyzed by glucose 6-P dehydrogenase?

    <p>6-Phosphoglucano-δ-lactone</p> Signup and view all the answers

    Which molecule is reduced during the oxidative phase of the pentose phosphate pathway?

    <p>NADP+</p> Signup and view all the answers

    What is the consequence of stopping the pathway after the synthesis of NADPH?

    <p>Accumulation of ribulose 5-P</p> Signup and view all the answers

    What is the primary function of the non-oxidative stage of the pentose phosphate pathway?

    <p>To convert five carbon intermediates into glycolytic precursors</p> Signup and view all the answers

    What is 6-P-gluconate converted into during the oxidative phase?

    <p>Ribulose 5-P</p> Signup and view all the answers

    What characteristic defines anabolic pathways?

    <p>They result in products that are more reduced than the starting materials.</p> Signup and view all the answers

    Which two five-carbon compounds are formed from ribulose 5-P in the non-oxidative phase?

    <p>Ribose 5-P and Xylulose 5-P</p> Signup and view all the answers

    What is the primary source of NADPH in anabolic pathways?

    <p>Pentose phosphate pathway</p> Signup and view all the answers

    How many reactions are involved in converting ribulose 5-P to other useful intermediates in the non-oxidative phase?

    <p>5 reactions</p> Signup and view all the answers

    In the oxidative phase of the pentose phosphate pathway, which product is formed from glucose 6-phosphate?

    <p>Ribulose 5-P</p> Signup and view all the answers

    What occurs if ribulose 5-P is produced in excess after the oxidative phase?

    <p>It is converted back to glucose 6-P.</p> Signup and view all the answers

    What type of molecule is NADPH in relation to its role in the pentose phosphate pathway?

    <p>A reducing agent</p> Signup and view all the answers

    During the non-oxidative phase of the pentose pathway, which two five-carbon sugars are converted into fructose 6-P and glyceraldehyde 3-P?

    <p>Xylulose 5-P and ribose 5-P</p> Signup and view all the answers

    Which series of reactions primarily occurs during the non-oxidative phase of the pentose phosphate pathway?

    <p>Interconversion of sugars to TCA cycle intermediates.</p> Signup and view all the answers

    What is the net reaction of the oxidative phase of the pentose phosphate pathway?

    <p>Glucose 6-phosphate + NADP+ + H2O -&gt; Ribulose 5-phosphate + NADPH + CO2</p> Signup and view all the answers

    Which metabolic byproduct is generated during the oxidative phase along with NADPH?

    <p>Carbon dioxide</p> Signup and view all the answers

    Study Notes

    Glycogen Synthesis

    • The first step of glycogen synthesis is catalyzed by UDP-glucose pyrophosphorylase.
    • Glucose-1-P reacts with UTP to form UDP-glucose and inorganic pyrophosphate (PPi).
    • The PPi released during the reaction can be hydrolyzed into two Pi's by inorganic pyrophosphatase.
    • The hydrolysis of PPi releases energy, removing the product of the prior reaction and driving the process towards product formation.
    • The second step of glycogen synthesis involves a synthase enzyme transferring a glucose unit from UDP-glucose to the non-reducing end of glycogen.
    • The result is the release of UDP.

    Glycogen Breakdown and Synthesis

    • Glycogen breakdown and synthesis utilize different enzyme systems for several reasons.
    • Separate enzymes allow both breakdown and synthesis to be energy-releasing processes.
    • Different enzyme systems enable hormonal regulation of both processes, preventing them from functioning simultaneously.
    • Simultaneous function would result in a futile cycle wasting energy and producing no net product.

    Hormones and Regulation

    • Hormones are organic compounds synthesized in one tissue, transported through the blood to another tissue, and exert an effect on metabolic processes.
    • Adrenaline (or epinephrine), a low-molecular-weight hormone derived from the amino acid tyrosine, stimulates a regulatory cascade leading to the activation of the catabolic enzyme phosphorylase a.
    • The cascade involves features commonly found in biochemistry including interaction with an extracellular receptor protein, the activation of a G protein, and the conversion of ATP to cyclic AMP.
    • Epinephrine also triggers the inactivation of the anabolic enzyme glycogen synthase, preventing a futile cycle.

    Adenylate Cyclase

    • Adenylate cyclase converts ATP into the second messenger, cyclic-AMP.
    • Second messengers are intracellular signaling agents often synthesized or degraded in response to an extracellular hormone.
    • The reaction catalyzed by adenylate cyclase is irreversible due to the rapid degradation of inorganic pyrophosphate by a pyrophosphatase enzyme.

    Pentose Phosphate Pathway

    • The pentose phosphate pathway is an alternate pathway to glycolysis, providing a source of NADPH for reductive biosynthesis, and generating pentose sugars.
    • Most biosynthetic pathways are reductive as the products are more reduced than the starting materials.
    • The reducing power comes from NADPH which is utilized in fatty acid and nucleotide biosynthesis.
    • This pathway operates in different modes depending on the cell's needs for NADPH, ATP, and ribose-5-phosphate.
    • It is important for maintaining cellular NADPH levels.

    Oxidative and Non-Oxidative Phases of the Pentose Phosphate Pathway

    • The oxidative phase of the pentose phosphate pathway generates NADPH.
    • It involves the oxidation of glucose 6-P to ribulose 5-P.
    • NADP+ is reduced to NADPH in two of the reactions.
    • The non-oxidative phase converts five-carbon sugars to intermediates of the TCA cycle (e.g., fructose 6-P, glyceraldehyde 3-P, and pyruvate).
    • The non-oxidative phase is more complex and involves a series of reactions to convert excess ribulose 5-P into usable intermediates.

    Enzymes Involved in the Pentose Phosphate Pathway

    • Glucose 6-P dehydrogenase catalyzes the first reaction of the oxidative phase and involves the oxidation of glucose 6-P to 6-phosphoglucono-δ-lactone.
    • Lactonase catalyzes the second reaction, converting the lactone to the open chain carboxylic acid, 6-P-gluconate.
    • 6-P-Gluconate dehydrogenase catalyzes the decarboxylation and oxidation of 6-P-gluconate to ribulose 5-P.
    • The synthesis of NADPH is complete at this stage, and the pathway continues to avoid accumulation of ribulose 5-P.
    • The non-oxidative phase is used to convert excess ribulose 5-P into other useful intermediates.
    • Phosphopentose Isomerase converts ribulose 5-P into ribose 5-P and xylulose 5-P.
    • Transketolase transfers a two-carbon fragment from xylulose 5-phosphate to ribose 5-phosphate, resulting in glyceraldehyde 3-phosphate and sedoheptulose 7-phosphate.
    • Transaldolase transfers a three-carbon fragment from sedoheptulose 7-phosphate to glyceraldehyde 3-phosphate, producing erythrose 4-phosphate and fructose 6-phosphate.
    • Transketolase catalyzes the reaction of erythrose 4-phosphate with xylulose 5-phosphate to generate glyceraldehyde 3-phosphate and fructose 6-phosphate.

    Thiamine Pyrophosphate

    • Transketolase uses thiamine pyrophosphate as a cofactor to transfer the two-carbon fragment.
    • This cofactor is also used in the pyruvate dehydrogenase reaction.

    Summary

    • The pentose phosphate pathway is a crucial pathway for producing NADPH and pentose sugars.
    • The oxidative phase is focused on NADPH synthesis, while the non-oxidative phase converts five-carbon sugars to intermediates of other metabolic pathways.
    • The pathway is carefully regulated to prevent the build-up of ribulose 5-P, preventing potential cellular toxicity.

    Glycogen Synthesis

    • The first step in glycogen synthesis involves UDP-glucose pyrophosphorylase which catalyzes the reaction of glucose-1-P with UTP to form UDP-glucose and releases inorganic pyrophosphate (PPi).
    • The hydrolysis of PPi is driven by the energy-releasing process of pyrophosphatase, which converts it into two Pi's. This helps to drive glycogen synthesis.

    Glycogen Synthase

    • The second step of glycogen synthesis involves glycogen synthase, which transfers a glucose unit from UDP-glucose to the non-reducing end of glycogen, releasing UDP.

    Importance of Separate Enzyme Systems for Glycogen Breakdown and Synthesis

    • The use of different enzymes for breakdown and synthesis ensures that both processes are energy-releasing, allowing them to proceed favorably towards product formation.
    • Separate enzymes allow for hormonal regulation of both pathways, preventing them from functioning simultaneously and creating a wasteful futile cycle.

    Hormonal Regulation

    • Hormones are organic compounds synthesized in one tissue and transported via blood to another tissue, where they influence metabolic processes.
    • Adrenaline (epinephrine), a low-molecular weight hormone derived from tyrosine, stimulates a series of reactions that activate the catabolic enzyme phosphorylase a, leading to glycogen degradation.

    Epinephrine Cascade

    • The epinephrine cascade involves:
      • Activation of extracellular receptor proteins by hormone binding
      • Activation of a G protein by interaction with the activated receptor
      • Activation of adenylate cyclase by interaction with the G protein
      • Conversion of ATP to cyclic AMP by adenylate cyclase
      • Activation of protein kinase by cyclic AMP
      • Phosphorylation and activation of phosphorylase kinase by the cyclic AMP sensitive kinase
      • Phosphorylation of phosphorylase b to phosphorylase a by phosphorylase kinase
      • Cleavage of glycogen by phosphorylase a

    Inactivation of Glycogen Synthase

    • Epinephrine also triggers a cascade that inactivates glycogen synthase, the anabolic enzyme responsible for adding glucose units to glycogen.
    • This cascade is similar to the activation cascade for glycogen breakdown, but it results in enzyme inactivation and suppression of glycogen synthesis.
    • The dual function of the epinephrine cascade, activating glycogen breakdown and inactivating synthesis, prevents a wasteful futile cycle.

    Adenylate Cyclase

    • Adenylate cyclase converts ATP to the second messenger cyclic AMP.
    • Second messengers are intracellular signaling agents often synthesized or degraded in response to extracellular hormones.
    • The irreversible nature of the adenylate cyclase reaction is due to the rapid degradation of inorganic pyrophosphate by pyrophosphatase, a strategy used often in biochemical pathways to drive reactions towards product formation.

    Pentose Phosphate Pathway

    • The pentose phosphate pathway is an alternative pathway to glycolysis that provides NADPH for reductive biosynthesis and generates pentose sugars.
    • Some reactions of the pentose pathway are integrated with glycolysis and gluconeogenesis.
    • All reactions occur in the cytosol.

    Biosynthetic Pathways Requiring NADPH

    • Most anabolic pathways are reductive, requiring NADPH as a source of reducing power.
    • Fatty acid biosynthesis and nucleotide biosynthesis are examples of pathways that utilize NADPH

    Mode 4 of the Pentose Phosphate Pathway

    • Mode 4 of the pentose pathway operates when the cell needs NADPH and ATP, but not ribose-5-phosphate for nucleic acid biosynthesis.
    • It consists of two phases:
      • Oxidative phase: glucose 6-P is oxidized to ribose 5-P, generating NADPH.
      • Non-oxidative phase: five-carbon sugars are converted to intermediates of the TCA cycle, such as fructose 6-P, glyceraldehydes 3-P, and pyruvate.

    Oxidative Phase of the Pentose Pathway

    • Glucose 6-P is oxidized to ribulose 5-P, reducing NADP+ to NADPH.
    • The net reaction of the oxidative phase is: glucose 6-phosphate + 2 NADP+ + H2O  ribulose 5-phosphate + 2 NADPH + 2 H+ + CO2
    • Further reactions are needed to convert excess ribulose 5-P into usable intermediates like pyruvate, which are ultimately oxidized to carbon dioxide.

    Non-Oxidative Phase of the Pentose Pathway

    • Xylulose 5-P and ribose 5-P are converted to fructose 6-P and glyceraldehyde 3-P through a series of reactions.
    • The products of the non-oxidative phase are mainstream metabolites that can enter glycolysis or gluconeogenesis.

    Glucose 6-P Dehydrogenase

    • The first reaction in the oxidative phase is catalyzed by glucose 6-P dehydrogenase.
    • Glucose 6-P is oxidized to 6-phosphoglucono-δ-lactone, reducing NADP+ to NADPH.

    Lactonase

    • Lactonase catalyzes the second reaction, opening the ring of 6-phosphoglucono-δ-lactone to form the open-chain carboxylic acid, 6-P-gluconate.

    6-P-Gluconate Dehydrogenase

    • The next reaction, catalyzed by 6-P-gluconate dehydrogenase, decarboxylates and oxidizes 6-P-gluconate to ribulose 5-P.
    • This reaction reduces a second molecule of NADP+ to NADPH.

    The Non-Oxidative Phase of the Pentose Pathway

    • The purpose of the non-oxidative phase is to convert ribulose 5-P into other useful intermediates for glycolysis.
    • Ribulose 5-P is converted into ribose 5-P and xylulose 5-P, which are then converted to glyceraldehyde 3-P and fructose 6-P.

    Phosphopentose Isomerase

    • Transketolase catalyzes the transfer of a two-carbon fragment from xylulose 5-phosphate to ribose 5-phosphate, producing glyceraldehyde-3-phosphate and sedoheptulose 7-phosphate.

    Thiamine Pyrophosphate

    • Transketolase requires thiamine pyrophosphate as a coenzyme for the transfer of the two-carbon fragment.

    Transaldolase

    • Transaldolase transfers a three-carbon fragment from sedoheptulose 7-phosphate to glyceraldehyde 3-phosphate, producing erythrose 4-phosphate and fructose 6-phosphate.

    Transketolase II

    • Erythrose 4-phosphate reacts with a second xylulose 5-phosphate, producing glyceraldehyde-3-phosphate and fructose 6-phosphate, catalyzed by the same transketolase enzyme.
    • These complex reactions allow for the production of usable intermediates for core metabolic pathways.

    Glycogen Metabolism

    • Glycogen: Major carbohydrate storage in humans, primarily in liver and muscle.
    • Structure: Branching polymer of α-1,4 linked glucose units with α-1,6 branches.
    • Glycogen Breakdown:
      • Phosphorylase a cleaves glycogen at non-reducing ends, releasing glucose-1-P.
      • Transferase and α-1,6-glucosidase enzymes handle branch points.
      • Glucose-1-P converted to glucose-6-P by phosphoglucomutase.
    • Glycogen Synthesis:
      • UDP-glucose is the activated intermediate.
      • UDP-glucose pyrophosphorylase converts glucose-1-P to UDP-glucose.
      • Inorganic pyrophosphatase hydrolyzes pyrophosphate, driving the reaction forward.
      • Glycogen synthase adds glucose units from UDP-glucose to glycogen.
    • Hormonal Regulation:
      • Different enzymes for breakdown and synthesis allow independent regulation.
      • Epinephrine stimulates glycogen breakdown and inhibits synthesis.
      • Cascades involve receptor binding, G proteins, adenylate cyclase, cyclic AMP, protein kinases.
      • Phosphorylation of phosphorylase b activates it to phosphorylase a, leading to glycogen breakdown.
      • Phosphorylation of glycogen synthase inactivates it.
    • Adenylate Cyclase: Converts ATP to cyclic AMP, the second messenger.

    Pentose Phosphate Pathway

    • Purpose: Provides NADPH for reductive biosynthesis and generates pentose sugars.
    • Location: Cytosol.
    • NADPH: Used in anabolic pathways like fatty acid and nucleotide synthesis.
    • Mode 4:
      • Operates when NADPH and ATP are needed, but not ribose-5-P.
      • Divided into oxidative and non-oxidative phases.
    • Oxidative Phase:
      • Glucose 6-P oxidized to ribulose 5-P.
      • NADP+ reduced to NADPH.
      • Overall reaction: glucose 6-P + 2 NADP+ + H2O → ribulose 5-P + 2 NADPH + 2 H+ + CO2.
    • Non-Oxidative Phase:
      • Converts ribulose 5-P into glycolytic intermediates (fructose 6-P, glyceraldehyde 3-P).
      • Series of reactions involving xylulose 5-P and ribose 5-P.

    Enzymes in the Pentose Phosphate Pathway

    • Glucose 6-P Dehydrogenase: Oxidizes glucose 6-P to 6-phosphogluconolactone, reducing NADP+ to NADPH.
    • Lactonase: Opens the ring of 6-phosphogluconolactone to form 6-P-gluconate.
    • 6-P-Gluconate Dehydrogenase: Decarboxylates and oxidizes 6-P-gluconate to ribulose 5-P, reducing NADP+ to NADPH.

    Glycogen Metabolism

    • Glycogen is the major carbohydrate storage compound in humans, found primarily in the liver and muscles.
    • Glycogen is composed of a backbone of α-1,4-linked glucose units, with α-1,6 branches approximately every 10-12 glucose units.
    • The enzyme phosphorylase a breaks down glycogen by cleaving non-reducing ends, releasing glucose-1-P.
    • Phosphorylase a cannot break down glucose units near branch points. Therefore, transferase and α-1,6-glucosidase enzymes convert 1,6-branches into linear 1,4-linked glucose units, allowing phosphorylase a to continue.
    • Glucose-1-P produced by phosphorylase a is converted to glucose-6-P by phosphoglucomutase, which can then enter glycolysis.

    Glycogen Synthesis

    • Glycogen synthesis utilizes different enzymes than breakdown and is the reverse process.
    • The process requires energy input as glycogen breakdown is energy-releasing.
    • Glycogen synthesis utilizes a set of enzymes to reverse the action of phosphorylase a and uses an activated UDP-glucose sugar nucleotide intermediate.
    • The first step is catalyzed by UDP-glucose pyrophosphorylase, where glucose-1-P reacts with UTP to form UDP-glucose and release inorganic pyrophosphate (PPi).
    • The released PPi is hydrolyzed to two Pi's by inorganic pyrophosphatase, an energy-releasing process that drives the reaction forward.
    • In the second step, glycogen synthetase transfers a glucose unit from UDP-glucose to the non-reducing end of glycogen, releasing UDP.

    Regulation of Glycogen Metabolism

    • Glycogen breakdown and synthesis utilize distinct enzyme systems to prevent simultaneous functioning and energy waste.
    • Hormonal regulation controls the activity of these systems, preventing futile cycles.
    • Epinephrine (adrenaline) stimulates a cascade of reactions leading to the activation of phosphorylase a, which degrades glycogen.
    • This cascade involves multiple steps, including binding of epinephrine to an extracellular receptor, activation of a G protein, activation of adenylate cyclase, conversion of ATP to cAMP, and activation of protein kinase enzymes.
    • Epinephrine also stimulates a cascade that inactivates glycogen synthase, preventing simultaneous glycogen synthesis and breakdown.

    Pentose Phosphate Pathway

    • The pentose phosphate pathway is an alternative pathway to glycolysis that generates NADPH for reductive biosynthesis and pentose sugars.
    • This pathway is integrated with glycolysis and gluconeogenesis and occurs in the cytosol.
    • Most biosynthetic pathways are reductive, requiring NADPH as a reducing agent.
    • The pentose phosphate pathway is divided into two phases: oxidative and non-oxidative.

    Oxidative Phase

    • The oxidative phase converts glucose-6-P to ribulose-5-P, generating two NADPH molecules.
    • The net reaction is: glucose 6-phosphate + 2 NADP+ + H2O  ribulose 5-phosphate + 2 NADPH + 2 H+ + C02
    • The pathway continues to convert excess ribulose-5-P into usable intermediates like pyruvate.

    Non-Oxidative Phase

    • This phase converts five-carbon sugars (xylulose 5-P and ribose-5-P) to fructose 6-P and glyceraldehyde 3-P.
    • The phase utilizes transketolase and transaldolase enzymes.
    • Transketolase transfers a two-carbon fragment from xylulose 5-phosphate to ribose 5-phosphate, producing glyceraldehyde-3-phosphate and sedoheptulose 7-phosphate.
    • Transaldolase transfers a three-carbon fragment from sedoheptulose 7-phosphate to glyceraldehyde 3-phosphate, producing erythrose 4-phosphate and fructose 6-phosphate.
    • Transketolase again acts on erythrose 4-phosphate and xylulose 5-phosphate to produce glyceraldehyde-3-phosphate and fructose 6-phosphate.

    Glycogen Metabolism

    • Glycogen is the primary form of carbohydrate storage in humans, primarily found in the liver and muscles.
    • It's made of α-1,4 linked glucose units with α-1,6 branches occurring every 10-12 glucose units.
    • Breakdown of glycogen releases glucose-1-P by phosphorylase a, which acts on non-reducing ends.
    • Branching in glycogen provides numerous non-reducing ends for enzymatic hydrolysis.
    • Transferase and α-1,6-glucosidase enzymes convert 1,6-branches into linear 1,4-linked glucose for further breakdown by phosphorylase a.
    • Glucose-1-P is converted to glucose-6-P by phosphoglucomutase, which can then enter glycolysis.
    • Synthesis of glycogen is the reverse of breakdown, utilizing a different set of enzymes.
    • Glycogen synthesis requires energy input as it's an anabolic process.
    • The synthesis uses UDP-glucose as an activated intermediate, formed from glucose-1-P and UTP by UDP-glucose pyrophosphorylase.
    • Hydrolysis of pyrophosphate (PPi), released during UDP-glucose formation, drives the reaction forward.
    • Glycogen synthase adds glucose units from UDP-glucose to the non-reducing end of glycogen, releasing UDP.
    • Different enzymes for glycogen breakdown and synthesis prevent futile cycles, ensuring energy efficiency.
    • Hormonal regulation of these enzymes prevents simultaneous breakdown and synthesis.

    Hormonal Regulation of Glycogen Metabolism

    • Hormones are synthesized in one tissue and transported by blood to target tissues to influence metabolism.
    • Epinephrine, a hormone derived from tyrosine, stimulates the activation of phosphorylase a for glycogen breakdown and the inactivation of glycogen synthase.
    • The epinephrine cascade involves a series of protein activation steps, ultimately triggering the phosphorylation of phosphorylase b to the active form, phosphorylase a.
    • The cascade includes:
      • Binding of epinephrine to extracellular receptor protein
      • Activation of a G protein by interaction with the activated receptor
      • Activation of adenylate cyclase by interaction with the G protein
      • Conversion of ATP to cyclic AMP by adenylate cyclase
      • Activation of protein kinase by cyclic AMP
      • Activation of phosphorylase kinase by the cyclic AMP sensitive kinase
      • Phosphorylation of phosphorylase b to phosphorylase a by phosphorylase kinase
    • Inactivation of glycogen synthase through an epinephrine-induced cascade prevents futile cycles.
    • The cascade involves similar steps as the activation of phosphorylase a, but ultimately inactivates glycogen synthase.

    The Pentose Phosphate Pathway

    • The pentose phosphate pathway is an alternative to glycolysis, providing NADPH for reductive biosynthesis and generating pentose sugars.
    • All reactions occur in the cytosol.
    • The pathway includes two stages:
      • Oxidative phase: generates NADPH
      • Non-oxidative phase: converts ribulose 5-P into glycolytic intermediates.
    • NADPH is essential for reductive biosynthesis, particularly in fatty acid synthesis.

    Oxidative Phase of the Pentose Phosphate Pathway

    • The first step is catalyzed by glucose 6-P dehydrogenase, oxidizing glucose 6-P to 6-phosphoglucono-δ-lactone while reducing NADP+ to NADPH.
    • The second step is the ring opening of lactone to 6-P-gluconate by lactonase.
    • 6-P-gluconate is then decarboxylated and oxidized to ribulose 5-P by 6-P-gluconate dehydrogenase, reducing a second molecule of NADP+ to NADPH.

    Non-Oxidative Phase of the Pentose Phosphate Pathway

    • The non-oxidative phase converts ribulose 5-P to useful intermediates for glycolysis.
    • It involves a series of five reactions to convert ribulose 5-P into ribose 5-P, xylulose 5-P, glyceraldehyde 3-P, and fructose 6-P.
    • Ribulose 5-P is isomerized to ribose 5-P by phosphopentose isomerase, utilizing an enediol intermediate.
    • Ribose 5-P is then epimerized to xylulose 5-P by phosphopentose epimerase, altering the chirality at carbon 3.
    • The non-oxidative phase involves transketolase and transaldolase reactions, which transfer two- or three-carbon units between sugars.

    Variations in the Pentose Phosphate Pathway

    • The oxidative phase, or Mode 2, produces NADPH, CO2, and ribose 5-P.
    • The need for NADPH and ribose 5-P often varies, leading to variations in the pathway beyond Mode 2.
    • The non-oxidative phase allows for adjustments in the production of these intermediates to meet cellular demands.

    Glycogen Metabolism

    • Glycogen is the major carbohydrate storage compound in humans, found primarily in the liver and muscle.
    • It consists of a backbone of α-1,4-linked glucose units with α-1,6 branches occurring every 10-12 glucose units.
    • Phosphorylase a cleaves glycogen at the non-reducing ends, releasing glucose-1-P.
    • Transferase and α-1,6-glucosidase enzymes convert 1,6-branches into linear 1,4-linked glucose units.
    • Phosphoglucomutase converts glucose-1-P to glucose-6-P, which can enter glycolysis.
    • Glycogen synthesis is the reverse of glycogen breakdown, requiring enzymes to reverse phosphorylase a action.
    • UDP-glucose acts as an activated sugar nucleotide intermediate.

    Glycogen Synthesis Enzymes

    • UDP-glucose pyrophosphorylase catalyzes the reaction of glucose-1-P with UTP to form UDP-glucose and PPi.
    • Inorganic pyrophosphatase hydrolyzes PPi into two Pi's, driving the overall reaction towards product formation.
    • Glycogen synthase transfers a glucose unit from UDP-glucose to the non-reducing end of glycogen.

    Regulation of Glycogen Metabolism

    • Different enzymes involved in breakdown and synthesis allow for independent regulation.
    • Hormones like adrenaline (epinephrine) activate a cascade to stimulate glycogen catabolism and inhibit glycogen synthesis.

    Adrenaline Cascade

    • Binding of adrenaline to an extracellular receptor activates a G protein.
    • Activated G protein activates adenylate cyclase.
    • Adenylate cyclase converts ATP to cyclic AMP (cAMP).
    • cAMP activates protein kinase.
    • Protein kinase activates phosphorylase kinase.
    • Phosphorylase kinase converts phosphorylase b to phosphorylase a, promoting glycogen breakdown.

    Pentose Phosphate Pathway

    • This pathway provides NADPH for reductive biosynthesis and generates pentose sugars.
    • Reactions occur in the cytosol.

    Oxidative Phase

    • Glucose 6-P dehydrogenase oxidizes glucose 6-P to 6-phosphoglucono-δ-lactone, reducing NADP+ to NADPH.
    • Lactonase converts the lactone to 6-P-gluconate.
    • 6-P-gluconate dehydrogenase decarboxylates and oxidizes 6-P-gluconate to ribulose 5-P, reducing a second NADP+ to NADPH.

    Non-Oxidative Phase

    • This phase converts ribulose 5-P to other intermediates for glycolysis.
    • Phosphopentose isomerase converts ribulose 5-P to ribose 5-P and xylulose 5-P.
    • Transketolase transfers a two-carbon fragment from xylulose 5-P to ribose 5-P, producing glyceraldehyde 3-P and sedoheptulose 7-P.
    • Transaldolase transfers a three-carbon fragment from sedoheptulose 7-P to glyceraldehyde 3-P, producing erythrose 4-P and fructose 6-P.
    • Transketolase (II) reacts erythrose 4-P with xylulose 5-P to give glyceraldehyde 3-P and fructose 6-P.

    Important Considerations

    • Thiamine pyrophosphate acts as a coenzyme in transketolase reactions.
    • The pentose phosphate pathway is regulated by the availability of NADP+, glucose 6-P, and the need for pentose sugars.

    Glycogen Metabolism

    • Humans store carbohydrates in the form of glycogen, a branched glucose polymer.
    • Glycogen is made up of α-1,4 linked glucose units with α-1,6 branches occurring every 10-12 glucose units.
    • The largest stores of glycogen are found in liver and muscle.
    • Phosphorylase a cleaves glycogen at non-reducing ends, releasing glucose-1-P, a reaction that favors product formation.
    • Glycogen degradation requires the action of a transferase enzyme and α-1,6-glucosidase to convert 1,6-branches into linear 1,4-linked glucose units to allow phosphorylase a to continue acting.
    • Phosphoglucomutase converts glucose-1-P to glucose-6-P, which can enter glycolysis.
    • Glycogen synthesis is the reversal of glycogen breakdown, but requires energy input.
    • Glycogen synthesis uses a set of enzymes to reverse the action of phosphorylase a.
    • Glycogen synthesis proceeds through an activated sugar nucleotide intermediate, UDP-glucose.

    Regulatory Cascade of Glycogen Breakdown

    • The binding of hormones to an extracellular receptor protein initiates a cascade of events leading to glycogen breakdown.
    • Epinephrine activates an enzyme cascade involving:
      • G protein interaction with an activated receptor
      • Adenylate cyclase activation by a G protein
      • Conversion of ATP to cAMP by adenylate cyclase
      • Activation of protein kinase by cAMP
      • Phosphorylation of phosphorylase kinase by cAMP-sensitive kinase
      • Phosphorylation of phosphorylase b to phosphorylase a by phosphorylase kinase
      • Cleavage of glycogen by phosphorylase a.
    • The breakdown of inorganic pyrophosphate by a pyrophosphatase enzyme ensures the adenylate cyclase reaction favors product formation.

    Regulatory Cascade of Glycogen Synthesis

    • Epinephrine also activates an enzyme cascade that inactivates glycogen synthase, the enzyme responsible for adding glucose units to glycogen.
    • This cascade shares many features with the glycogen breakdown cascade, but ultimately results in the inactivation of glycogen synthase, preventing a futile cycle.

    Pentose Phosphate Pathway

    • The pentose phosphate pathway is an alternate pathway to glycolysis, providing a source of NADPH for reductive biosynthesis and generating pentose sugars.
    • The pathway takes place in the cytosol and is integrated with glycolysis and gluconeogenesis.

    NADPH

    • Most biosynthetic pathways are reductive, meaning products are more reduced than starting materials.
    • NADPH is the reducing power for anabolic pathways, including fatty acid and nucleotide biosynthesis.

    The Pentose Phosphate Pathway Operative in Mode 4

    • The cell requires NADPH and ATP, but not ribose-5-phosphate for nucleic acid biosynthesis.
    • This mode of the pathway involves an oxidative and non-oxidative phase.

    Oxidative Stage of the Pentose Phosphate Pathway

    • In the oxidative stage, glucose 6-P is oxidized to ribulose 5-P with the production of NADPH.
    • All NADPH produced by the pentose phosphate pathway comes from the oxidative phase.
    • The net reaction of the oxidative phase is: glucose 6-phosphate + 2 NADP+ + H20  ribulose 5-phosphate + 2 NADPH + 2 H+ + C02.
    • The pathway continues to the non-oxidative stage to utilize excess ribulose 5-P, which would be wasteful and potentially toxic.

    Non-Oxidative Stage of the Pentose Phosphate Pathway

    • This stage converts the five carbon intermediate, ribulose 5-P, to other useful intermediates, such as fructose 6-P and glyceraldehyde 3-P, for use in glycolysis.
    • This stage involves a series of complex reactions, converting ribulose 5-P to ribose 5-P and xylulose 5-P, ultimately producing fructose 6-P and glyceraldehydes 3-P.

    The Oxidative Stage Enzymes

    • Glucose 6-P dehydrogenase catalyzes the first reaction, oxidizing glucose 6-P to 6-phosphoglucono-δ-lactone, reducing NADP+ to NADPH.
    • Lactonase opens the ring of 6-phosphoglucono-δ-lactone to form the open chain carboxylic acid, 6-P-gluconate.
    • 6-P-Gluconate dehydrogenase decarboxylates and oxidizes 6-P-gluconate to ribulose-5-P while reducing NADP+ to NADPH.

    Non-Oxidative Stage Enzymes

    • Phosphopentose isomerase converts ribulose 5-P to ribose 5-P.
    • Phosphopentose epimerase converts ribose 5-P to xylulose 5-P.
    • Transketolase is involved in the subsequent reactions that lead to fructose 6-P and glyceraldehyde 3-P.

    Mode 2 of the Pentose Phosphate Pathway

    • This mode produces two molecules of NADPH, one molecule of carbon dioxide, and one molecule of ribose 5-phosphate.
    • The need for NADPH and ribose 5-phosphate often varies, requiring modes of the pathway beyond mode 2, as the non-oxidative phase allows for flexibility in product ratios.

    Enzymes' Mechanisms

    • Phosphopentose isomerase, similar to phosphoglucose isomerase and triose phosphate isomerase in glycolysis, uses an enediol intermediate.
    • Recognizing similarities in mechanisms aids in memorizing new reactions.

    Glycogen Metabolism

    • Glycogen is the major carbohydrate storage compound in humans.
    • It is a glucose polymer with a backbone of α-1,4 linked glucose units and branches occurring every 10-12 glucose units.
    • The largest stores of glycogen are found in the liver and muscle.
    • Glycogen breakdown is catalyzed by phosphorylase a, which breaks down the non-reducing ends of glycogen, releasing glucose-1-P.
    • Glucose-1-P is converted to glucose-6-P by phosphoglucomutase, which can then enter the glycolysis pathway.
    • Glycogen synthesis is a reversal of breakdown and employs a set of enzymes to reverse the action of phosphorylase a.
    • The synthesis proceeds through an activated (UDP-glucose) sugar nucleotide intermediate.
    • The first step in glycogen synthesis is catalyzed by UDP-glucose pyrophosphorylase, which converts glucose-1-P to UDP-glucose by reacting with UTP.
    • The pyrophosphate released in the previous reaction is hydrolyzed to form two Pi's, driving the reaction sequence towards product formation.
    • The second step in glycogen synthesis is catalyzed by glycogen synthetase, which transfers a glucose unit from UDP-glucose to the non-reducing end of glycogen.
    • Glycogen breakdown and synthesis use different enzyme systems to ensure both processes are energy releasing and subject to hormonal regulation.
    • This prevents the two systems from catalyzing a futile cycle that wastes energy.

    Hormonal Regulation

    • Hormones, such as adrenaline or epinephrine, are organic compounds that exert metabolic effects by traveling through the blood.
    • Epinephrine stimulates the activation of phosphorylase a, which degrades glycogen.
    • This involves a series of reactions including the binding of epinephrine to an extracellular receptor protein, activation of a G protein, adenylate cyclase activation, and conversion of ATP to cAMP by adenylate cyclase.
    • cAMP activates a protein kinase enzyme, which phosphorylates and activates phosphorylase kinase.
    • Phosphorylase kinase converts phosphorylase b to phosphorylase a, which then breaks down glycogen.
    • Epinephrine also stimulates a cascade that inactivates glycogen synthase, preventing the simultaneous breakdown and synthesis of glycogen and thus, a futile cycle.

    Pentose Phosphate Pathway

    • The pentose phosphate pathway is an alternative pathway to glycolysis that generates NADPH for reductive biosynthesis and pentose sugars.
    • The pathway occurs in the cytosol and some reactions are integrated with glycolysis and gluconeogenesis.
    • The pentose phosphate pathway involves an oxidative and non-oxidative stage.
    • The first reaction of the oxidative phase is catalyzed by glucose 6-P dehydrogenase, which oxidizes glucose 6-P to 6-phosphoglucono-δ-lactone, while reducing NADP+ to NADPH.
    • The second reaction is catalyzed by lactonase, which converts the lactone to the open chain carboxylic acid, 6-P-gluconate.
    • The third reaction is catalyzed by 6-P-gluconate dehydrogenase, which decarboxylates and oxidizes 6-P-gluconate to ribulose 5-P, while reducing a second molecule of NADP+ to NADPH.
    • The non-oxidative stage converts ribulose 5-P into other usable intermediates, such as ribose 5-P and xylulose 5-P.
    • Ribulose 5-P can be isomerized to ribose 5-P by phosphopentose isomerase, which goes through an enediol intermediate.
    • Ribose 5-P can be converted to xylulose 5-P by phosphopentose epimerase, changing the chirality of the hydroxyl group at carbon 3.
    • These two intermediates are then converted to glyceraldehyde 3-P and fructose 6-P, enabling their use in glycolysis.

    Epinephrine and the Glycogen Cascade

    • Epinephrine activates an enzyme cascade that breaks down glycogen and inhibits its synthesis
    • The cascade ensures efficient energy production and prevents futile cycles

    Adenylate Cyclase and Second Messengers

    • Adenylate cyclase converts ATP into cyclic AMP, a crucial second messenger
    • Second messengers are intracellular signaling molecules that respond to extracellular hormones
    • The adenylate cyclase reaction is irreversible due to the breakdown of inorganic pyrophosphate

    Pentose Phosphate Pathway

    • An alternative pathway to glycolysis that produces NADPH, crucial for biosynthesis
    • Generates sugars with five carbons, and integrates with glycolysis and gluconeogenesis
    • Occurs in the cytosol

    Biosynthetic Pathways and NADPH

    • Biosynthetic pathways are often reductive, requiring a reduction of starting materials
    • NADPH provides the reducing power for these pathways
    • Examples include fatty acid and nucleotide biosynthesis

    Mode 4 of the Pentose Phosphate Pathway

    • This mode operates when the cell needs NADPH and ATP, not ribose-5-phosphate
    • Divided into two phases: oxidative and non-oxidative
    • The oxidative phase generates NADPH from glucose 6-P to ribose 5-P
    • The non-oxidative phase converts five-carbon sugars to TCA cycle intermediates like fructose 6-P and pyruvate

    The Oxidative Stage of the Pentose Pathway

    • Oxidizes glucose 6-P to ribulose 5-P, generating NADPH during the process
    • All NADPH synthesized in the pathway is produced during this phase
    • The net reaction is: glucose 6-phosphate + 2 NADP+ + H20  ribulose 5-phosphate + 2 NADPH + 2 H+ + C02
    • Further reactions are needed to convert excess ribulose 5-P

    The Non-Oxidative Stage of the Pentose Pathway

    • Converts five-carbon sugars like xylulose 5-P and ribose 5-P into fructose 6-P and glyceraldehyde 3-P
    • Involves a complex series of reactions that produce mainstream metabolites for glycolysis or gluconeogenesis

    Glucose 6-P Dehydrogenase

    • Catalyzes the first reaction of the oxidative phase
    • Oxidizes glucose 6-P to 6-phosphoglucono-δ-lactone, reducing NADP+ to NADPH
    • The reaction is equivalent to oxidizing an aldehyde to an acid

    Lactonase

    • Catalyzes the second reaction of the oxidative phase
    • Opens the ring of the lactone product, converting it to the open-chain carboxylic acid, 6-P-gluconate

    6-P-Gluconate Dehydrogenase

    • Catalyzes the third reaction of the oxidative phase
    • Decarboxylates and oxidizes 6-P-gluconate to ribulose 5-P, reducing another NADP+ to NADPH

    The Oxidative Stage of the Pentose Pathway Continued

    • The oxidative phase ends with the completion of NADPH synthesis
    • The accumulation of ribulose 5-P would be wasteful and potentially toxic
    • The pathway continues to the non-oxidative stage to convert excess ribulose 5-P into usable intermediates

    The Non-Oxidative Stage of the Pentose Pathway Continued

    • The non-oxidative phase converts ribulose 5-P into intermediates used in glycolysis
    • Involves several complex reactions to convert ribulose 5-P to ribose 5-P and xylulose 5-P
    • These five carbon intermediates are then converted to glyceraldehyde 3-P and fructose 6-P

    Phosphopentose Isomerase

    • Catalyzes the isomerization of ribulose 5-P to ribose 5-P in the non-oxidative stage
    • Forms an unstable endiol intermediate, which decays into a stable aldehyde

    Phosphopentose Isomerase Mechanism

    • Involves an enediol intermediate, similar to mechanisms seen in glycolysis with phosphoglucose isomerase and triose phosphate isomerase
    • This highlights the recurring themes and mechanisms in biochemistry

    Mode 2 of the Pentose Phosphate Pathway

    • Often referred to as the oxidative phase
    • Produces two molecules of NADPH, one carbon dioxide, and one ribose 5-phosphate
    • Represents a simplified mode where the cell needs both NADPH and ribose 5-P in a specific ratio

    Phosphopentose Epimerase

    • Catalyzes the conversion of ribose 5-P to xylulose 5-P in the non-oxidative stage
    • Alters the chirality of the hydroxyl group at the third carbon

    Transketolase

    • Catalyzes the transfer of a two-carbon fragment from xylulose 5-phosphate to ribose 5-phosphate in the non-oxidative stage
    • Forms glyceraldehyde-3-phosphate and sedoheptulose 7-phosphate
    • The reaction is reversible and can function in the reverse direction under certain conditions
    • This enzyme uses thiamine pyrophosphate, a coenzyme previously encountered in the pyruvate dehydrogenase reaction

    Transaldolase

    • Catalyzes the transfer of a three-carbon fragment from sedoheptulose 7-phosphate to glyceraldehyde 3-phosphate in the non-oxidative stage
    • Produces erythrose 4-phosphate and fructose 6-phosphate

    Transketolase II

    • Catalyzes the reaction of erythrose 4-phosphate with another xylulose 5-phosphate in the non-oxidative stage
    • Produces glyceraldehyde-3-phosphate and fructose 6-phosphate
    • Uses the same transketolase enzyme as the previous step but involves different substrates and products
    • This intricate pathway generates useful intermediates for glycolysis

    Glycogen Synthesis

    • Glycogen synthesis requires two key enzymes: UDP-glucose pyrophosphorylase and glycogen synthase.
    • UDP-glucose pyrophosphorylase catalyzes the formation of UDP-glucose from glucose-1-P and UTP.
    • The release of inorganic pyrophosphate (PPi) during this reaction is hydrolyzed to two inorganic phosphates (Pi), which releases energy and further drives the reaction in the direction of product formation.
    • Glycogen synthase transfers a glucose unit from UDP-glucose to the non-reducing end of glycogen, releasing UDP.

    Breakdown and Synthesis of Glycogen

    • Glycogen breakdown and synthesis involve different enzymatic systems, which allows both processes to be regulated independently by hormones.
    • This independent regulation prevents a futile cycle where energy is wasted without net product formation.

    Hormonal Regulation

    • Hormones are organic compounds synthesized in one tissue and transported to another tissue via the bloodstream to regulate metabolic processes.
    • Adrenaline (epinephrine) is a hormone derived from tyrosine.

    Epinephrine Cascade

    • Epinephrine triggers a series of events that activate phosphorylase a, the enzyme responsible for glycogen breakdown.
    • This cascade involves a series of protein activations, ultimately leading to the conversion of phosphorylase b to phosphorylase a via phosphorylation.
    • The activated phosphorylase a then cleaves glycogen.
    • Epinephrine also inhibits glycogen synthase, the enzyme responsible for glycogen synthesis, preventing a futile cycle.

    Pentose Phosphate Pathway

    • The pentose phosphate pathway is an alternative pathway to glycolysis that provides NADPH for reductive biosynthesis and generates pentose sugars.
    • The pathway is crucial for anabolic (biosynthetic) pathways, which require NADPH for reduction reactions.

    Mode 4 of the Pentose Phosphate Pathway

    • This mode is operative when the cell requires NADPH and ATP but not ribose-5-phosphate for nucleic acid biosynthesis.
    • The pathway is divided into two phases: oxidative and non-oxidative.
    • The oxidative phase generates NADPH from glucose 6-P to ribose 5-P.
    • The non-oxidative phase converts five-carbon sugars to intermediates of the TCA cycle, like fructose 6-P, glyceraldehydes 3-P, and pyruvate.

    Oxidative Phase

    • The oxidative phase involves the oxidation of glucose 6-P to ribulose 5-P.
    • NADP+ is reduced to NADPH in two reactions.
    • The net reaction of the oxidative phase can be represented as: glucose 6-phosphate + 2 NADP+ + H20  ribulose 5-phosphate + 2 NADPH + 2 H+ + C02

    Non-Oxidative Phase

    • In this phase, xylulose 5-P and ribose 5-P are converted to fructose 6-P and glyceraldehyde 3-P.
    • This phase involves a complex series of reactions that converts five-carbon sugars to intermediates used in glycolysis and gluconeogenesis.
    • The non-oxidative phase is crucial for utilizing excess ribulose 5-P which would otherwise be toxic.

    Glucose 6-P Dehydrogenase (Oxidative Phase)

    • This enzyme catalyzes the first reaction in the oxidative phase.
    • The reaction involves the oxidation of glucose 6-P (in the hemiacetal form) to 6-phosphoglucono-δ-lactone (a cyclic ester), coupled to the reduction of NADP+ to NADPH.

    Lactonase (Oxidative Phase)

    • Catalyzes the second reaction in the oxidative phase, converting the 6-phosphoglucono-δ-lactone to the open chain carboxylic acid, 6-P-gluconate.

    6-P-Gluconate Dehydrogenase (Oxidative Phase)

    • Catalyzes the decarboxylation and oxidation of 6-P-gluconate to ribulose 5-P, coupled to the reduction of a second molecule of NADP+ to NADPH.

    Phosphopentose Isomerase (Non-Oxidative Phase)

    • Converts the ketone, ribulose 5-P, to the aldehyde, ribose 5-P, through an unstable endiol intermediate.
    • This reaction essentially completes the oxidative phase of the pathway.

    Phosphopentose Epimerase (Non-Oxidative Phase)

    • This enzyme converts ribose 5-P to xylulose 5-P, changing the chirality of the hydroxyl group at the number three carbon.

    Transketolase (Non-Oxidative Phase)

    • Plays a crucial role in the non-oxidative phase, acting as a key enzyme for carbon chain transformations.

    Mode 2 of the Pentose Phosphate Pathway

    • This mode generates two molecules of NADPH, one molecule of carbon dioxide, and one molecule of ribose 5-phosphate.
    • This mode is sufficient when the cell requires NADPH and ribose 5-phosphate in a 2:1 ratio.

    Importance of Non-Oxidative Phase

    • The non-oxidative phase is necessary because the cell often requires different ratios of NADPH and ribose 5-phosphate, or only one of these substances is needed.
    • This phase allows for the adjustment of the pathway's output to meet the specific needs of the cell.

    Glycogen Metabolism

    • Glycogen is the major carbohydrate storage compound in humans, found primarily in the liver and muscle.
    • Glycogen is a glucose polymer with a backbone of α-1,4 linked glucose units and α-1,6 branches occurring every 10-12 glucose units.
    • Glycogen's branching provides many non-reducing ends, allowing enzymatic hydrolysis reactions.

    Glycogen Breakdown

    • Phosphorylase a breaks down glycogen by cleaving 1,4-linked glucose units from non-reducing ends, releasing glucose-1-P.
    • Transferase and α-1,6-glucosidase enzymes convert 1,6-branches into linear 1,4-linked glucose units, allowing phosphorylase a to continue.
    • Glucose-1-P is converted to glucose-6-P by phosphoglucomutase, which can then enter glycolysis.

    Glycogen Synthesis

    • Glycogen synthesis uses different enzymes than breakdown, requiring energy input as it's the reverse of an energy-releasing process.
    • Glycogen synthesis is regulated by hormones, preventing simultaneous breakdown and synthesis (futile cycle).

    Key Enzymes in Glycogen Breakdown & Synthesis

    • Phosphorylase a: cleaves glycogen, releasing glucose-1-P.
    • Transferase: converts 1,6-branches to linear glucose units.
    • α-1,6-glucosidase: cleaves 1,6-branches.
    • Phosphoglucomutase: converts glucose-1-P to glucose-6-P.
    • UDP-glucose pyrophosphorylase: forms UDP-glucose.
    • Inorganic pyrophosphatase: hydrolyzes PPi, driving the reaction forward.
    • Glycogen synthetase: transfers glucose units from UDP-glucose to glycogen.

    Hormonal Regulation of Glycogen Metabolism

    • Epinephrine (adrenaline) activates glycogen breakdown and inhibits synthesis.
    • Epinephrine initiates a cascade of reactions:
      • Extracellular receptor activation.
      • G protein activation.
      • Adenylate cyclase activation.
      • ATP conversion to cyclic AMP (cAMP).
      • Activation of protein kinase by cAMP.
      • Phosphorylation of phosphorylase kinase.
      • Phosphorylation of phosphorylase b to active phosphorylase a.

    Pentose Phosphate Pathway

    • The pentose phosphate pathway is an alternative to glycolysis, providing NADPH for reductive biosynthesis and generating pentose sugars.
    • The pathway occurs in the cytosol and has both an oxidative and non-oxidative phase.

    Oxidative Phase (Mode 2) of the Pentose Phosphate Pathway

    • Generates NADPH, CO2, and ribose 5-phosphate.
    • Key enzymes:
      • Glucose-6-phosphate dehydrogenase: generates NADPH.
      • 6-phosphogluconolactonase: hydrolyzes lactone.
      • 6-phosphogluconate dehydrogenase: generates NADPH and CO2.

    Non-Oxidative Phase of the Pentose Phosphate Pathway

    • Converts pentose sugars to intermediates that can be utilized by glycolysis and gluconeogenesis.
    • Key enzymes:
      • Phosphopentose isomerase: interconverts ribose-5-phosphate and ribulose-5-phosphate.
      • Phosphopentose epimerase: converts ribulose-5-phosphate to xylulose-5-phosphate.
      • Transketolase: transfers a two-carbon unit.
      • Transaldolase: transfers a three-carbon unit.

    Glycogen Metabolism

    • Glycogen is the major carbohydrate storage compound in human liver and muscle
    • Glycogen has a backbone of α-1,4 linked glucose units with α-1,6 branches occurring every 10-12 glucose units
    • The largest stores of glycogen are found in liver and muscle
    • Phosphorylase a cleaves the non-reducing ends of glycogen, releasing 1,4-linked glucose units as glucose-1-P
    • Phosphorylase a cannot attack glucose units near 1,6-branch points, so a transferase enzyme and an α-1,6-glucosidase enzyme convert the 1,6-branches into additional linear 1,4-linked glucose units
    • Glucose-1-P units produced by phosphorylase a are converted to glucose-6-P by the enzyme phosphoglucomutase
    • Glycogen synthesis is the reversal of glycogen breakdown and requires energy input
    • Glycogen synthesis utilizes a set of enzymes to reverse the action of phosphorylase a
    • Glycogen synthesis proceeds through an activated (UDP-glucose) sugar nucleotide intermediate

    ### The Regulatory Cascade

    • The binding of a hormone activates an extracellular receptor protein
    • G protein activation occurs by interaction with an activated extracellular receptor
    • The activation of adenylate cyclase occurs by interaction with a G protein
    • ATP is converted to Cyclic AMP by the adenylate cyclase enzyme
    • A protein kinase enzyme is activated by cyclic AMP
    • Phosphorylase kinase activation occurs by phosphorylation by the cyclic AMP sensitive kinase
    • Phosphorylase b is converted to phosphorylase a by phosphorylation by the phosphorylase kinase
    • Phosphorylase a cleaves glycogen

    Inactivation of Glycogen Synthase

    • Epinephrine stimulates a signaling cascade that inactivates glycogen synthase
    • This cascade shares many elements of the glycogen catabolism activation cascade, but results in enzyme inactivation and suppression of glycogen synthesis
    • The dual function of the epinephrine cascade prevents the futile cycle of simultaneous glycogen breakdown and synthesis, by which energy would be wasted

    Adenylate Cyclase

    • Adenylate cyclase converts ATP to cyclic AMP, a second messenger
    • Second messengers are intracellular signaling molecules whose synthesis and degradation are often triggered by extracellular hormones
    • The adenylate cyclase reaction is irreversible because one of the products, inorganic pyrophosphate, is rapidly degraded by a pyrophosphatase enzyme

    ### Pentose Phosphate Pathway

    • The pentose phosphate pathway is an alternate pathway to glycolysis that provides a source of NADPH for use in reductive biosynthesis
    • The pathway also generates pentose sugars
    • Some reactions of the pentose phosphate pathway are integrated with glycolysis and gluconeogenesis
    • All reactions in the pentose phosphate pathway occur in the cytosol

    Biosynthetic Pathways Requiring NADPH

    • Most anabolic pathways are also reductive, i.e. the products are more reduced (have a higher % of hydrogen atoms) than the starting materials
    • The reducing power for anabolic pathways comes from NADPH
    • Fatty acid biosynthesis and nucleotide biosynthesis utilize NADPH

    Mode 4 of the Pentose Phosphate Pathway

    • The pentose phosphate pathway can be represented in a simplified version of mode 4, with some reactions omitted
    • Mode 4 is operative when the cell needs NADPH and ATP, but not ribose-5-phosphate for nucleic acid biosynthesis
    • Breakdown into two phases:
      • The first phase involves the oxidative generation of NADPH from glucose 6-P to ribose 5-P
      • The second phase involves the non-oxidative conversion of five-carbon sugars to intermediates of the TCA cycle, such as fructose 6-P, glyceraldehydes 3-P, and pyruvate

    The Oxidative Stage of the Pentose Pathway

    • In the oxidative phase, glucose 6-P is oxidized to ribulose 5-P.
    • In two of the reactions, NADP+ is reduced to NADPH
    • All NADPH produced in the pentose phosphate pathway is synthesized in the oxidative phase.
    • Net reaction of the oxidative phase: glucose 6-phosphate + 2 NADP+ + H20  ribulose 5-phosphate + 2 NADPH + 2 H+ + C02
    • The pathway continues into the non-oxidative stage because the cell only needs a limited amount of ribulose 5-P, and excess is detrimental
    • In other modes of the pentose phosphate pathway, excess ribulose 5-P is converted back to glucose 6-P by gluconeogenesis

    The Non-Oxidative Stage of the Pentose Pathway

    • In the non-oxidative stage, the five carbon sugars xylulose 5-P and ribose-5 P are converted to fructose 6-P and glyceraldehyde 3-P
    • This phase involves a complicated series of reactions
    • The products of this phase are mainstream metabolites that can enter glycolysis or gluconeogenesis

    Glucose 6-P Dehydrogenase

    • The first reaction of the oxidative phase is catalyzed by glucose 6-P dehydrogenase
    • Glucose 6-P is oxidized to 6-phosphoglucono-δ-lactone (a cyclic ester)
    • NADP+ is reduced to NADPH in this reaction
    • This reaction is equivalent to oxidizing an aldehyde to an acid

    Lactonase

    • The second reaction is catalyzed by lactonase
    • The lactone is converted to the open chain carboxylic acid, 6-P-gluconate, by ring opening

    6-P-Gluconate Dehydrogenase

    • The third reaction involves the decarboxylation and oxidation of 6-P-gluconate to ribulose 5-P
    • NADP+ is reduced to NADPH in this reaction

    The Oxidative Stage of the Pentose Pathway

    • The oxidative phase of the pathway is complete at this point, because NADPH synthesis is finished
    • Stopping the pathway here would leave a large pool of ribulose 5-P, which is energetically wasteful and could be toxic
    • Therefore, the pathway continues into the non-oxidative stage

    The Non-Oxidative Stage of the Pentose Pathway

    • The non-oxidative stage converts ribulose 5-P into other useful glycolysis intermediates
    • Ribulose 5-P is first converted into ribose 5-P and xylulose 5-P by two enzymes
    • These five carbon intermediates are then converted to glyceraldehyde 3-P and fructose 6-P by three enzymes

    Phosphopentose Isomerase

    • The first step of the non-oxidative stage is the isomerisation of the ketone, ribulose 5-P, to the aldehyde, ribose 5-P
    • The reaction involves an endiol intermediate, where two adjacent carbon-carrying hydroxyl groups are connected by a double bond
    • The endiol decays into the stable aldehyde
    • This reaction completes the oxidative phase of the pathway

    Phosphopentose Isomerase Mechanism

    • The isomerase reaction proceeds via an enediol intermediate
    • Similar enediol intermediates occur in phosphoglucose isomerase and triose phosphate isomerase in glycolysis
    • Identifying similarities in mechanism can help you memorize new reactions by recognizing variations on a theme rather than completely new phenomena

    Mode 2 of Pentose Phosphate Pathway

    • The oxidative phase of the pathway is sometimes referred to as Mode 2.
    • The products of mode 2 are two molecules of NADPH, one molecule of carbon dioxide, and one molecule of ribose 5-phosphate
    • This could be the end of the pathway if the cell always needed NADPH and ribose 5-phosphate in a 2:1 ratio
    • Because the precise ratio of NADPH and ribose 5-phosphate needed by the cell is not constant, the non-oxidative phase is necessary to modify this ratio

    Phosphopentose epimerase

    • Ribose 5-P is converted into xylulose 5-P by an epimerase reaction at the beginning of the non-oxidative phase
    • This reaction changes the chirality of the hydroxyl group at carbon 3, converting ribulose 5-P to xylulose 5-P

    Transketolase

    • The non-oxidative phase begins with the conversion of ribulose 5-P to xylulose 5-P
    • The reactions are all in a linear order with the exception of the conversion of ribulose 5-phosphate to xylulose 5-phosphate

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    This quiz covers the processes of glycogen synthesis and breakdown, including the roles of essential enzymes and the energy dynamics involved. It highlights the importance of separate enzyme systems in regulating these metabolic pathways efficiently. Test your understanding of the biochemical mechanisms behind glycogen metabolism.

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