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Genome Annotation and Databases Quiz

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Questions and Answers

What is the process of adding pertinent information about raw DNA sequences to the genome databases called?

DNA encoding

Genetic mapping

Genomic sequencing

Genome annotation (correct)

What are the two main types of genome annotation?

Protein annotation and gene annotation

Genetic coding and functional mapping

Sequence identification and gene categorization

Structural annotation and functional annotation (correct)

What are some of the different genomic features that can be annotated?

Protein-coding regions, open reading frames (ORFs), start and stop codons (correct)

Non-coding regions, introns, exons

Genetic markers, DNA sequences, nucleotide bases

Transcription factors, enhancers, promoters

What is the BUSCO approach used for in the context of genome annotation?

Assessing genome assembly and annotation Signup and view all the answers

What is the main difference between signal and content sensors in coding region annotation?

Signal sensors identify regulatory elements, while content sensors identify sequence similarity Signup and view all the answers

What is the term for the mechanism that leads to unequal crossing over, slippage during replication, and transposition?

Rearrangements Signup and view all the answers

What is the result of one allele replacing all others in the population?

Fixation Signup and view all the answers

What is the term for the replacement of a single nucleotide in a DNA sequence?

Substitution Signup and view all the answers

Which algorithm is used for inferring phylogenetic trees from distances?

UPGMA Signup and view all the answers

What are point mutations primarily due to?

Errors in replication or DNA damage repair Signup and view all the answers