Podcast
Questions and Answers
What is the expected frequency of the aabb genotype if two AaBb individuals are crossed?
What is the expected frequency of the aabb genotype if two AaBb individuals are crossed?
Which of the following statements is TRUE regarding linked loci?
Which of the following statements is TRUE regarding linked loci?
What is the unit of measurement for genetic distance between two loci?
What is the unit of measurement for genetic distance between two loci?
What is the primary function of hemoglobin in red blood cells?
What is the primary function of hemoglobin in red blood cells?
Signup and view all the answers
Which of the following components is NOT a part of a single hemoglobin molecule?
Which of the following components is NOT a part of a single hemoglobin molecule?
Signup and view all the answers
Where does oxygen bind to the hemoglobin molecule?
Where does oxygen bind to the hemoglobin molecule?
Signup and view all the answers
How many hemoglobin units are typically found in a single red blood cell?
How many hemoglobin units are typically found in a single red blood cell?
Signup and view all the answers
What does the term 'phenotype' refer to in the context of genetics?
What does the term 'phenotype' refer to in the context of genetics?
Signup and view all the answers
According to the information provided, how many genes are associated with a single phenotype?
According to the information provided, how many genes are associated with a single phenotype?
Signup and view all the answers
What is the significance of the number 3,419 mentioned in the text?
What is the significance of the number 3,419 mentioned in the text?
Signup and view all the answers
Which of the following is NOT a way that mutations can affect protein function and cause disease?
Which of the following is NOT a way that mutations can affect protein function and cause disease?
Signup and view all the answers
What is meant by the term 'ectopic expression' in the context of protein function?
What is meant by the term 'ectopic expression' in the context of protein function?
Signup and view all the answers
What is the primary goal of the Online Mendelian Inheritance in Man (OMIM) database?
What is the primary goal of the Online Mendelian Inheritance in Man (OMIM) database?
Signup and view all the answers
What does "allelic editing" refer to in the context of the provided text?
What does "allelic editing" refer to in the context of the provided text?
Signup and view all the answers
Which of the following is NOT a potential benefit of gene editing in the context of the provided text?
Which of the following is NOT a potential benefit of gene editing in the context of the provided text?
Signup and view all the answers
Which of the following statements is TRUE regarding the relationship between genes and phenotypes?
Which of the following statements is TRUE regarding the relationship between genes and phenotypes?
Signup and view all the answers
What is the significance of the large number of phenotypes (over 7,000) mentioned in the text?
What is the significance of the large number of phenotypes (over 7,000) mentioned in the text?
Signup and view all the answers
What does "SCD" stand for in the provided text?
What does "SCD" stand for in the provided text?
Signup and view all the answers
Why are mutations considered to be a significant factor in the development of diseases?
Why are mutations considered to be a significant factor in the development of diseases?
Signup and view all the answers
What is the significance of the numbers '7,480' and '4,878' mentioned in the text?
What is the significance of the numbers '7,480' and '4,878' mentioned in the text?
Signup and view all the answers
Which of the following is NOT considered a type of misexpression?
Which of the following is NOT considered a type of misexpression?
Signup and view all the answers
What is the potential significance of "Check for 2025" mentioned in the text?
What is the potential significance of "Check for 2025" mentioned in the text?
Signup and view all the answers
Which of the following is NOT a potential application of CRISPR-Cas9 gene editing, based on the text provided?
Which of the following is NOT a potential application of CRISPR-Cas9 gene editing, based on the text provided?
Signup and view all the answers
Which of the following is an example of a novel property mutation?
Which of the following is an example of a novel property mutation?
Signup and view all the answers
What is the relationship between "genotype" and "phenotype" in the context of the provided information?
What is the relationship between "genotype" and "phenotype" in the context of the provided information?
Signup and view all the answers
Which of the following is NOT an example of a gain-of-function mutation?
Which of the following is NOT an example of a gain-of-function mutation?
Signup and view all the answers
Based on the provided text, what is the primary target of CRISPR-Cas9 gene editing in the context of sickle cell disease and β-thalassemia?
Based on the provided text, what is the primary target of CRISPR-Cas9 gene editing in the context of sickle cell disease and β-thalassemia?
Signup and view all the answers
What does "OMIM" stand for in the text?
What does "OMIM" stand for in the text?
Signup and view all the answers
What is a common characteristic of gain-of-function mutations?
What is a common characteristic of gain-of-function mutations?
Signup and view all the answers
What is the primary mechanism by which tumor suppressor genes like TP53 and RB1 prevent cancer development?
What is the primary mechanism by which tumor suppressor genes like TP53 and RB1 prevent cancer development?
Signup and view all the answers
Which of the following is a key characteristic of a tumor suppressor gene mutation?
Which of the following is a key characteristic of a tumor suppressor gene mutation?
Signup and view all the answers
What is the name of the gene responsible for encoding the β subunit of hemoglobin?
What is the name of the gene responsible for encoding the β subunit of hemoglobin?
Signup and view all the answers
Which amino acid is substituted for Glutamic acid at position 6 in the β subunit of hemoglobin in sickle cell disease?
Which amino acid is substituted for Glutamic acid at position 6 in the β subunit of hemoglobin in sickle cell disease?
Signup and view all the answers
What is the primary effect of the Glu6Val mutation in the β-globin subunit on deoxygenated hemoglobin?
What is the primary effect of the Glu6Val mutation in the β-globin subunit on deoxygenated hemoglobin?
Signup and view all the answers
What is the role of the spleen in sickle cell disease?
What is the role of the spleen in sickle cell disease?
Signup and view all the answers
What is the primary mechanism by which sickled erythrocytes cause tissue damage?
What is the primary mechanism by which sickled erythrocytes cause tissue damage?
Signup and view all the answers
What is the role of gamma (γ) subunits in fetal hemoglobin?
What is the role of gamma (γ) subunits in fetal hemoglobin?
Signup and view all the answers
What is the significance of understanding sickle cell disease at the molecular level?
What is the significance of understanding sickle cell disease at the molecular level?
Signup and view all the answers
What is the role of CRISPR-Cas9 in treating sickle cell disease?
What is the role of CRISPR-Cas9 in treating sickle cell disease?
Signup and view all the answers
What is the significance of using autologous CD34+ cells in CRISPR-Cas9 therapy for sickle cell disease?
What is the significance of using autologous CD34+ cells in CRISPR-Cas9 therapy for sickle cell disease?
Signup and view all the answers
Flashcards
Dominant Alleles
Dominant Alleles
Alleles that express their trait even when paired with a recessive allele.
Recessive Alleles
Recessive Alleles
Alleles that only express their trait when paired with another recessive allele.
Independent Assortment
Independent Assortment
Mendel's principle stating alleles for different traits assort independently of one another.
Linked Loci
Linked Loci
Signup and view all the flashcards
Centimorgans
Centimorgans
Signup and view all the flashcards
Red Blood Cells (RBCs)
Red Blood Cells (RBCs)
Signup and view all the flashcards
Hemoglobin Structure
Hemoglobin Structure
Signup and view all the flashcards
Phenotypes
Phenotypes
Signup and view all the flashcards
Gain-of-Function Mutations
Gain-of-Function Mutations
Signup and view all the flashcards
Retinoblastoma
Retinoblastoma
Signup and view all the flashcards
Charcot-Marie-Tooth Disease
Charcot-Marie-Tooth Disease
Signup and view all the flashcards
Novel Property Mutations
Novel Property Mutations
Signup and view all the flashcards
Sickle Cell Disease
Sickle Cell Disease
Signup and view all the flashcards
Autosomal Recessive Disorder
Autosomal Recessive Disorder
Signup and view all the flashcards
HBA and HBB Genes
HBA and HBB Genes
Signup and view all the flashcards
Glu6Val Mutation
Glu6Val Mutation
Signup and view all the flashcards
Deoxygenated Hemoglobin
Deoxygenated Hemoglobin
Signup and view all the flashcards
Hemolytic Anemia
Hemolytic Anemia
Signup and view all the flashcards
Capillary Occlusion
Capillary Occlusion
Signup and view all the flashcards
CRISPR-Cas9
CRISPR-Cas9
Signup and view all the flashcards
BCL11A Enhancer
BCL11A Enhancer
Signup and view all the flashcards
Genes
Genes
Signup and view all the flashcards
Loss-of-function mutation
Loss-of-function mutation
Signup and view all the flashcards
Acquisition of a novel property
Acquisition of a novel property
Signup and view all the flashcards
Misexpression
Misexpression
Signup and view all the flashcards
Ectopic expression
Ectopic expression
Signup and view all the flashcards
Heterochronic expression
Heterochronic expression
Signup and view all the flashcards
OMIM
OMIM
Signup and view all the flashcards
Number of genes associated with a single phenotype
Number of genes associated with a single phenotype
Signup and view all the flashcards
Allelic Editing
Allelic Editing
Signup and view all the flashcards
Transfusion Independence
Transfusion Independence
Signup and view all the flashcards
Vaso-Occlusive Episodes
Vaso-Occlusive Episodes
Signup and view all the flashcards
Sickle Cell Disease (SCD)
Sickle Cell Disease (SCD)
Signup and view all the flashcards
Transfusion-Dependent β-Thalassemia (TDT)
Transfusion-Dependent β-Thalassemia (TDT)
Signup and view all the flashcards
Genotype
Genotype
Signup and view all the flashcards
Gene Map Statistics
Gene Map Statistics
Signup and view all the flashcards
Study Notes
Molecular, Biochemical, and Cellular Basis of Genomic Disease
- The lecture covers the molecular, biochemical, and cellular underpinnings of genomic diseases.
Objectives of This Lecture
- Illustrate the fundamental mechanism behind genetic variation.
- Explain different types of mutations.
- Describe the effect of mutations on protein function.
- Describe protein classification based on expression patterns and tissue specificity.
- Understand genetic and phenotypic heterogeneity.
- Describe the relationships between protein expression sites and diseases.
- Describe diseases discussed in the lecture.
Genetic Variation Among Humans
- Substantial variations exist among humans (e.g., skin color, height, hair color, susceptibility).
- Mutation: any change in DNA sequence.
- Mutations in humans often cause genetic disease, typically affecting single genes and not microscopically apparent.
- Mutations can occur in coding or regulatory DNA sequences.
- Germline cells transmit mutations to the next generation, somatic cells do not.
- Allele: alternative forms/versions of a gene.
- Locus: a gene's location on a chromosome.
- Polymorphism: existence of multiple alleles for a gene in a population.
Molecular Basis of a Disease
- Molecular disease: disease traced back to a single molecular factor (e.g., protein, polypeptide).
- Mutation (inherited or acquired) is the primary cause of molecular disease
- Understanding molecular pathology is critical for treating genetic diseases and understanding normal functions.
- Biochemical genetics studies relationships between genes and observable traits (phenotypes) at the protein production, function, biochemistry, and metabolism (e.g., turnover) levels.
Types of Mutations
- Base-pair substitutions (point mutations): Single base changes.
- Base-pair deletions or insertions: Removal or addition of base pairs in DNA.
- Splice-site mutations: Affect the splicing process.
- Gene duplications/deletions: Changes in gene number.
- Promoter mutations: Affect gene expression.
- Mobile element insertion: Movement of DNA segments.
- Expanded repeats: Repetition of DNA sequences.
Dominant Alleles and Recessive Alleles
- Alleles determine traits.
- Dominant alleles express their trait even with one copy.
- Recessive alleles only express their trait with two copies.
Dominant Alleles and Recessive Alleles
- A depiction of how offspring inherit traits based on dominant and recessive alleles is illustrated
- Relationships between the genotype and phenotype are explained with diagrams
Linked Loci
- Loci on the same chromosome tend to be inherited together
- Physical distance between linked loci influences the frequency of recombination.
- Recombination frequency is used to map the relative locations of genes on chromosomes.
Red Blood Cells: Structure and Function
- Red blood cells (erythrocytes) are biconcave discs without a nucleus.
- They contain hemoglobin.
- Each red blood cell contains millions of hemoglobin units.
- Hemoglobin consists of 2 alpha and 2 beta units.
- Each heme unit contains iron for oxygen bonding.
Sickle Cell Disease
- a subunit encoded by HBA on chromosome 16.
- ẞ subunit encoded by HBB gene on chromosome 11.
- Sickle cell disease is an autosomal recessive disorder of hemoglobin.
- A missense mutation substitutes valine for glutamic acid at amino acid 6 of the β-globin gene.
- This mutation reduces the solubility of deoxygenated hemoglobin, causing the cells to sickle.
Importance of understanding disease at molecular level
- The transition from fetal to adult hemoglobin illustrates the importance of understanding disease at the molecular level.
- Genetic editing using CRISPR-Cas9 can target disease-causing mutations to cure the disease.
Genotype vs Phenotype
- A link exists between the genotype and phenotype.
- Large numbers of genes and phenotypes are linked.
- Over 7000 phenotypes and nearly 4000 genes are associated.
Effect of Mutation on Protein Function
- Mutations can affect protein function in 4 ways:
- Loss-of-function.
- Gain-of-function.
- Novel properties.
- Misexpression.
Loss-of-Function Mutations
- Alterations in a gene's sequence can lead to loss-of-function.
- Examples include nonsense mutations, missense mutations impacting protein stability, and decreased protein abundance.
- Disease severity often correlates with the degree of lost function.
Loss of Protein Function Mutations (Thalassemia)
- Thalassemia results from reduced or absent globin production.
- Alpha thalassemia involves deficiencies in alpha globin chains, resulting in excess beta chains.
- Beta thalassemia involves deficiencies in beta globin chains, resulting in excess alpha chains.
- Both forms lead to premature erythrocyte destruction and anemia.
Gain-of-Function Mutations
- Mutations can enhance normal functions of a protein or create novel ones.
- Examples include increased protein production or altered protein activity.
Novel Property Mutations (e.g., Sickle Cell Disease)
- Changes in amino acid residues can generate novel protein properties without altering normal functions.
- This involves mutations altering the biochemical properties of the protein, and creating new qualities that cause disease.
Mutations Associated with Heterochronic or Ectopic Gene Expression
- Mutations in regulatory regions cause abnormal gene expression inappropriate times or locations.
- This can lead to diseases like malignancy, or hereditary persistence of fetal hemoglobin due to mutations in the regulatory elements.
Ways for Mutations to Disrupt the Synthesis or Function of a Normal Protein
- Mutations can disrupt protein production and function at various steps, such as transcription, translation, folding, post-translational modification, assembly, subcellular localization, and cofactor binding.
Classification of Proteins
- Proteins are classified based on expression patterns;
- Housekeeping proteins: expressed in all cells; fundamental.
- Tissue-specific proteins: expressed in specific cells; unique functions.
Relationship Between Site of Protein Expression and Disease
- Mutations in tissue-specific proteins can cause diseases restricted to those tissues.
- Disease can also occur in other tissues, that do not express the defective protein.
Relationship Between Site of Protein Expression and Disease (Cont'd)
- Mutations in housekeeping proteins rarely cause severe, widespread diseases.
- Genetic redundancy or protein abundance can mitigate the impact of mutations in certain cases.
Genetic Heterogeneity vs. Pleiotropy
- Genetic heterogeneity: Different mutations can lead to the same phenotype.
- Pleiotropy: A single gene mutation can cause multiple phenotypes.
Protein Abnormalities and Genetic Diseases
- Mutations in functional classes of proteins lead to genetic disorders.
- These mutations affect various cellular components affecting their function.
How to classify mutations that disrupt cell and organ functions
- A classification system for mutations is needed, that describes and explains how different types of mutations can disrupt cell and organ function.
Studying That Suits You
Use AI to generate personalized quizzes and flashcards to suit your learning preferences.
Related Documents
Description
Test your knowledge on genetics and hemoglobin functions with this quiz. It covers topics including genotype frequency, linked loci, and the role of hemoglobin in red blood cells. Perfect for genetics enthusiasts or students studying the subject.