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Questions and Answers
Which of the following is NOT a biological method for delivering DNA into plant cells?
Which of the following is NOT a biological method for delivering DNA into plant cells?
Agrobacterium tumefaciens is a bacterium that causes crown gall disease in a wide range of dicot plants.
Agrobacterium tumefaciens is a bacterium that causes crown gall disease in a wide range of dicot plants.
True (A)
What are the two main types of opines found in Ti plasmids?
What are the two main types of opines found in Ti plasmids?
Nopaline and octopine
The Ti plasmid contains genes that induce the formation of ______ and associated changes in plant metabolism.
The Ti plasmid contains genes that induce the formation of ______ and associated changes in plant metabolism.
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Match the following components of the Ti plasmid with their respective functions:
Match the following components of the Ti plasmid with their respective functions:
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What is the primary function of the vir genes in the Ti plasmid?
What is the primary function of the vir genes in the Ti plasmid?
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T-DNA stands for "tumor-inducing DNA" and is responsible for inducing the formation of galls in plants.
T-DNA stands for "tumor-inducing DNA" and is responsible for inducing the formation of galls in plants.
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What are auxins and cytokinins, and how do they contribute to tumor formation?
What are auxins and cytokinins, and how do they contribute to tumor formation?
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Which of the following genes are involved in the T-DNA transfer process in Agrobacterium tumefaciens?
Which of the following genes are involved in the T-DNA transfer process in Agrobacterium tumefaciens?
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The Vir genes are located within the T-DNA region of the Ti plasmid.
The Vir genes are located within the T-DNA region of the Ti plasmid.
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The protein encoded by the ______ gene is responsible for cleaving the T-DNA at the left and right borders during transfer.
The protein encoded by the ______ gene is responsible for cleaving the T-DNA at the left and right borders during transfer.
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What is the role of VirA and VirG in the T-DNA transfer process?
What is the role of VirA and VirG in the T-DNA transfer process?
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What type of molecule does VirB encode?
What type of molecule does VirB encode?
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Match each Vir gene with its primary function:
Match each Vir gene with its primary function:
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The VirD2 protein guides the T-DNA molecule to the plant cell through a specialized export channel.
The VirD2 protein guides the T-DNA molecule to the plant cell through a specialized export channel.
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VirD2 will remain attached at the right border of T-DNA.
VirD2 will remain attached at the right border of T-DNA.
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What is the primary function of the VirD2 protein after the T-DNA enters the plant cell?
What is the primary function of the VirD2 protein after the T-DNA enters the plant cell?
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What is the primary function of the VirB proteins in the transfer of T-DNA?
What is the primary function of the VirB proteins in the transfer of T-DNA?
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VirE2 forms a ______ in the plant cytoplasmic membrane to allow passage of the T-DNA strand.
VirE2 forms a ______ in the plant cytoplasmic membrane to allow passage of the T-DNA strand.
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The co-integration method of Agrobacterium-mediated gene transfer involves removing the _____, _____, and ____ genes from the T-DNA and replacing them with the gene of interest.
The co-integration method of Agrobacterium-mediated gene transfer involves removing the _____, _____, and ____ genes from the T-DNA and replacing them with the gene of interest.
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What is the role of VirE2 in protecting the T-DNA?
What is the role of VirE2 in protecting the T-DNA?
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Match the following proteins with their respective functions in T-DNA transfer:
Match the following proteins with their respective functions in T-DNA transfer:
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What happens to the T-DNA after it is exported from the bacterium?
What happens to the T-DNA after it is exported from the bacterium?
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VirD2 is involved in the transport of the T-DNA across the plant cell membrane.
VirD2 is involved in the transport of the T-DNA across the plant cell membrane.
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What is the significance of the T-DNA transfer process in the context of plant-bacterial interactions?
What is the significance of the T-DNA transfer process in the context of plant-bacterial interactions?
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What is the primary purpose of wounding a plant during Agrobacterium infection?
What is the primary purpose of wounding a plant during Agrobacterium infection?
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The biolistic gun method requires living vectors to transfer DNA into plant cells.
The biolistic gun method requires living vectors to transfer DNA into plant cells.
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What are the inert materials used for in the biolistic gun process?
What are the inert materials used for in the biolistic gun process?
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The _____ gun is a physical method that shoots a piece of DNA into a recipient cell.
The _____ gun is a physical method that shoots a piece of DNA into a recipient cell.
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Match the following advantages and disadvantages of the biolistic gun method:
Match the following advantages and disadvantages of the biolistic gun method:
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What is the primary purpose of the VirD2 protein in Agrobacterium-mediated gene transfer?
What is the primary purpose of the VirD2 protein in Agrobacterium-mediated gene transfer?
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In a binary vector system, T-DNA and vir genes are located on the same plasmid.
In a binary vector system, T-DNA and vir genes are located on the same plasmid.
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What is removed and replaced with the gene of interest in the co-integration method?
What is removed and replaced with the gene of interest in the co-integration method?
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The ______ vector is an alternative system used to improve transformation efficiency by separating T-DNA and vir genes.
The ______ vector is an alternative system used to improve transformation efficiency by separating T-DNA and vir genes.
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Match the following steps in the binary vector method with their descriptions:
Match the following steps in the binary vector method with their descriptions:
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What is a disadvantage of using the co-integration method for gene transfer?
What is a disadvantage of using the co-integration method for gene transfer?
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The co-integration method is straightforward and does not face challenges.
The co-integration method is straightforward and does not face challenges.
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What do the vir genes in Agrobacterium tumefaciens help facilitate?
What do the vir genes in Agrobacterium tumefaciens help facilitate?
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Flashcards
Virulence Region
Virulence Region
A critical area in A.tumefaciens responsible for T-DNA transfer to plants.
VirA
VirA
A protein that helps activate the transfer process in A.tumefaciens when stimulated by plants.
VirG
VirG
A protein that works with VirA to regulate the virulence genes in A.tumefaciens.
VirD1
VirD1
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VirD2
VirD2
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VirB
VirB
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VirE2
VirE2
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T-DNA
T-DNA
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Membrane channel
Membrane channel
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Agrobacterium transformation
Agrobacterium transformation
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Gene integration
Gene integration
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Pore formation
Pore formation
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Biolistic gun
Biolistic gun
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Protection from degradation
Protection from degradation
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Agrobacterium tumefaciens
Agrobacterium tumefaciens
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Inert material
Inert material
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Advantages of biolistics
Advantages of biolistics
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VirD2 function
VirD2 function
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Gene co-integration
Gene co-integration
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Auxin and cytokinin genes
Auxin and cytokinin genes
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Binary vector system
Binary vector system
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Disarmed Ti plasmid
Disarmed Ti plasmid
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Transformation efficiency
Transformation efficiency
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Vir helper plasmid
Vir helper plasmid
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Gene Transfer
Gene Transfer
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Ti plasmid
Ti plasmid
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Auxin
Auxin
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Cytokinin
Cytokinin
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Opine
Opine
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Crown Gall Disease
Crown Gall Disease
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Study Notes
Genetic Engineering: Gene Transfer to Plants
- Genetic engineering involves transferring genes to plants to enhance traits
- One method is using Agrobacterium tumefaciens
- This bacterium causes crown gall disease in dicot plants
- Agrobacterium has a Ti plasmid
- The Ti plasmid includes genes responsible for tumor formation and changes in plant metabolism
- These genes can be integrated into the plant's DNA
- The Ti plasmid can move genes of interest into plant cells
- Agrobacterium is mixed with plant cells allowing the Ti plasmid to transfer the desired gene
Methods of Gene Transfer
-
Biological Method: Agrobacterium
-
Physical Method: Biolistic gun (particle bombardment)
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Agrobacterium:
- Uses Ti plasmid to transfer genes
- Natural process that can be manipulated
-
Biolistic Gun:
- Physical method to deliver DNA into plants
- Small particles coated with genes are shot into plant cells using helium gas
- Successful gene transfer and integration
Overview of Gene Transfer
- Method A (Agrobacterium):
- Identifies gene of interest
- Isolates gene
- Inserts isolated gene into the Ti plasmid
- Mixes Agrobacterium with plant cells to transfer the Ti plasmid into the plant
- Transformed cells are screened for the inserted gene.
- Method B (Gene Gun):
- Identifies gene of interest
- Coats gold or tungsten particles with DNA
- Shoots these particles into plant cells using helium gas
- Transformed cells are screened.
Agrobacterium tumefaciens
- Causes crown gall disease in dicot plants.
- The Ti plasmid contains genes essential for tumor formation and associated changes in plant metabolism
- These genes can be transferred and integrated into the plant's genomic DNA
(Original) Ti Plasmid
-
Stands for tumor-inducing plasmid
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Consists of:
- T-DNA
- Vir genes
- Genes encoding opine catabolism.
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Left and right border sequences define the T-DNA region
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Includes genes for plant growth hormones auxin and cytokinin
-
Opines become a nutrient source for Agrobacterium
T-DNA Region
- Contains genes for auxin, cytokinin and opines
- When expressed, these genes can induce tumor formation in plants.
- Opines are the nutrients for Agrobacterium
Opine Catabolism
- Controls expression of opine transport and catabolism
- Opines are derivatives of amino acids or sugar phosphates
- These opines can be catabolized as nutrients.
- Examples of opines include nopaline and octopine
Virulence Region
- Vir genes are crucial for T-DNA transfer to plants
- Virulence region consists of several genes (VirA, VirG, VirD1, VirD2, VirB, and VirE2).
- These genes are essential for the process
Molecular Basis of T-DNA Transfer
- Vir proteins synthesize single-stranded T-DNA
- T-DNA complex imports into the nucleus
- T-DNA is integrated into the plant's genome.
- Vir genes play a crucial role in the transfer process.
Manipulation of Agrobacterium for Genetic Engineering
- Two approaches to genetic engineering using Agrobacterium:
- Co-integration: disarming the T-DNA region
- Binary vector: separates T-DNA and Vir genes.
Co-integration Method
- Remove some of the Ti plasmid genes such as auxin, cytokinin, and opine genes
- Inserting a gene of interest between the two borders of a T-DNA region
- Inserting the gene of interest into plant cells.
Binary Vector Method
- Separating the T-DNA and Vir genes into two different plasmids
- Combining both plasmids to facilitate the transfer of the new gene into plants
Gene Transfer to Plants (general considerations)
- Agrobacterium infection requires wounding of the plant for successful infection
- Wound release chemicals such as aceto-syringone and sugars to activate Vir genes.
Biolistic Gun
- Physical method for gene transfer
- Process of shooting DNA-coated particles into plant cells
- Particles that are coated with the gene of interest are fired into cells to facilitate gene delivery
Biolistic Gun - parameters
- Inert materials for coating DNA
- Competent cells suitable for targeted delivery
- Consideration of proper depth and strength of penetration
Advantage and Disadvantage of Biolistic Gun
- Advantages:
- Widely applicable to various plant species
- Does not require living vectors
- Relatively simple protocol
- Disadvantages:
- Random integration of the gene within the plant cell.
- High cost of equipment and materials
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Description
Explore the fascinating world of genetic engineering in plants, focusing on gene transfer methods. This quiz covers the role of Agrobacterium tumefaciens and the physical method of biolistic gun technique for delivering DNA into plant cells. Test your knowledge on the mechanisms and implications of these methods!