Chapter 18

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Questions and Answers

What role do repressors play in gene expression?

  • They prevent activators from binding to DNA. (correct)
  • They facilitate the activation of control elements.
  • They modify the DNA sequence directly.
  • They enhance the binding of transcription factors.

What is a key feature of co-expressed eukaryotic genes?

  • They can have different regulatory elements.
  • They are always clustered in operons.
  • They are located on the same chromosome.
  • They share the same combination of control elements. (correct)

How do chromatin loops from different chromosomes contribute to gene expression?

  • They segregate chromatin for distinct functions.
  • They enhance the transcription of unrelated genes.
  • They congregate at sites rich in transcription factors. (correct)
  • They provide structural support for transcription.

What is the purpose of post-transcriptional regulatory mechanisms?

<p>To allow cells to adjust gene expression quickly. (D)</p> Signup and view all the answers

What is true about the combination of control elements in gene activation?

<p>A specific combination is needed for activation. (C)</p> Signup and view all the answers

What effect does histone acetylation have on chromatin structure?

<p>It promotes transcription by opening up the chromatin. (B)</p> Signup and view all the answers

What is the primary consequence of DNA methylation?

<p>Causes long-term inactivation of genes. (C)</p> Signup and view all the answers

How does genomic imprinting affect gene expression?

<p>It regulates expression of either the maternal or paternal alleles. (D)</p> Signup and view all the answers

Which of the following accurately describes epigenetic inheritance?

<p>It is the transmission of traits through mechanisms independent of nucleotide sequence. (C)</p> Signup and view all the answers

What role do chromatin-modifying enzymes play in gene expression?

<p>They influence the ability of DNA to bind transcription machinery. (D)</p> Signup and view all the answers

What role does feedback inhibition play in enzyme regulation?

<p>It inhibits further synthesis of the product by blocking enzyme activity. (D)</p> Signup and view all the answers

What are control elements in relation to eukaryotic genes?

<p>They serve as binding sites for transcription factors. (A)</p> Signup and view all the answers

What constitutes an operon?

<p>The segment of DNA that contains the operator, promoter, and controlled genes. (C)</p> Signup and view all the answers

What distinguishes general transcription factors from specific transcription factors?

<p>General factors are essential for the transcription of all protein-coding genes. (C)</p> Signup and view all the answers

How does the repressor affect gene transcription?

<p>By binding to the operator and blocking transcription. (C)</p> Signup and view all the answers

Which process is associated with the regulation of gene expression in different cell types?

<p>Transcription factor binding to control elements. (D)</p> Signup and view all the answers

What is the function of a corepressor in gene regulation?

<p>It enhances the repressor's ability to inhibit transcription. (B)</p> Signup and view all the answers

What determines whether the repressor is active or inactive?

<p>The presence of other molecules. (D)</p> Signup and view all the answers

What is the purpose of gene expression regulation in bacteria?

<p>To allow only essential genes to be expressed based on environmental needs. (C)</p> Signup and view all the answers

What is located some distance from the operon and produces the repressor protein?

<p>A separate regulatory gene. (D)</p> Signup and view all the answers

What happens when E. coli has insufficient tryptophan?

<p>It begins the synthesis of tryptophan. (C)</p> Signup and view all the answers

What is the primary role of general transcription factors?

<p>They initiate transcription of all protein-coding genes. (D)</p> Signup and view all the answers

What is an activator in the context of transcription?

<p>A protein that binds to an enhancer and stimulates transcription. (A)</p> Signup and view all the answers

How do specific transcription factors contribute to transcription levels?

<p>They bind to both proximal and distal control elements to enhance transcription. (C)</p> Signup and view all the answers

What helps assemble and position the preinitiation complex at the promoter?

<p>Interactions between bound activators and mediator proteins. (A)</p> Signup and view all the answers

Where are proximal control elements typically located?

<p>Close to the promoter of the gene. (C)</p> Signup and view all the answers

What is the function of the mediator proteins in transcription?

<p>To facilitate interactions between activators and general transcription factors. (C)</p> Signup and view all the answers

What is a characteristic of enhancers in relation to genes?

<p>Each enhancer is typically associated with only one gene. (C)</p> Signup and view all the answers

What is the result of protein-mediated bending of DNA in the transcription process?

<p>It brings bound activators into contact with mediator proteins. (B)</p> Signup and view all the answers

What is typically necessary for the development of full-fledged cancer?

<p>Multiple mutations including an active oncogene (B)</p> Signup and view all the answers

Which genes are commonly implicated in inherited breast cancer?

<p>BRCA1 and BRCA2 (C)</p> Signup and view all the answers

How do tumor viruses contribute to cancer development?

<p>By integrating into the DNA and interfering with gene regulation (D)</p> Signup and view all the answers

Which of the following cancers is particularly known for routine screening and removal of suspicious polyps?

<p>Colorectal cancer (D)</p> Signup and view all the answers

What is a characteristic feature of breast cancer as mentioned in the content?

<p>It has four major types identified through genomic profiling (C)</p> Signup and view all the answers

What is the significance of alternative RNA splicing in eukaryotic cells?

<p>It expands the range of proteins that can be produced from a limited number of genes. (A)</p> Signup and view all the answers

Which mechanism is mentioned as blocking the initiation of translation?

<p>Regulatory proteins and miRNA (A)</p> Signup and view all the answers

How does the life span of eukaryotic mRNA compare to that of prokaryotic mRNA?

<p>Eukaryotic mRNA is more long-lived than prokaryotic mRNA. (B)</p> Signup and view all the answers

What role does ubiquitin play in protein regulation?

<p>It marks proteins for degradation by proteasomes. (A)</p> Signup and view all the answers

What regulates the simultaneous activation of translation initiation factors in a cell?

<p>Fertilization processes (A)</p> Signup and view all the answers

Which of the following processes occurs after the translation of polypeptides?

<p>Selective degradation (C)</p> Signup and view all the answers

Where do nucleotide sequences that influence mRNA life span reside in eukaryotes?

<p>In the untranslated region at the 3' end (B)</p> Signup and view all the answers

Which modifications are involved in the processing of polypeptides after translation?

<p>Cleavage and chemical modifications (C)</p> Signup and view all the answers

Flashcards

Gene Regulation in Bacteria

Bacteria control which genes are expressed based on environmental needs. They only express genes for products needed by the cell.

Feedback Inhibition

A metabolic pathway's end product stops further synthesis by inhibiting enzyme activity.

Operon

A cluster of genes with related functions, regulated by a single on/off switch.

Operator

A DNA segment within the promoter, controlling gene expression in an operon.

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Repressor Protein

A protein that stops gene transcription by binding to the operator.

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Corepressor

A molecule that joins with a repressor protein to switch an operon off.

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Transcription Regulation

Cells control the amount of enzymes they produce by controlling the expression of the genes making these enzymes.

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Regulatory gene

A gene that codes for a protein that controls the expression of other genes.

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Repressor function

Repressors inhibit gene expression by binding to control elements or interfering with activator binding.

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Combinatorial control

A specific combination of control elements and activator proteins is needed for gene expression.

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Co-expressed eukaryotic genes

Eukaryotic genes that are expressed together, even though they are located on different chromosomes, share the same combinations of control elements.

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Transcription factories

Areas within the nucleus where chromatin loops from different chromosomes congregate for gene expression, promoting coordinated transcription.

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Post-transcriptional regulation

Gene expression is regulated after transcription, allowing for quick responses to environmental changes.

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Histone Acetylation

Acetyl groups attach to histone tails, opening up chromatin, promoting transcription initiation.

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DNA Methylation

Adding methyl groups to DNA bases, this condenses chromatin reducing transcription

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Chromatin Condensation

Tightening of DNA structure, often associated with reduced transcription.

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Epigenetic Inheritance

Inheritance of traits through mechanisms not involving DNA sequence changes.

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Control Element

Segments of noncoding DNA that binding sites for protein, affecting gene expression.

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General Transcription Factors

Factors required for transcription of all protein coding genes.

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Specific Transcription Factors

Factors needed for transcription of specific genes.

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RNA polymerase II

Enzyme that needs general transcription factors to initiate the process of transcription.

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Enhancers

Distal control elements that can be far away from a gene, even in introns, associated with one gene.

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Activators

Proteins that bind to enhancers and boost the speed of gene transcription.

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Proximal control elements

DNA regions close to a gene that control its transcription, close to the promoter.

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Mediator proteins

Interact with general transcription factors and enhancers; facilitate the assembly of proteins to initiate transcription.

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Transcription initiation complex

Complete collection of proteins required for transcription; assembles after all required factors are in place.

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Cancer Development Steps

Multiple genetic alterations, such as activating oncogenes and inactivating tumor suppressor genes, are usually required for a cell to become cancerous. This process often takes time, explaining why cancer incidence increases with age.

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Colorectal Cancer Screening

Regular screening for colorectal cancer is recommended to detect and remove precancerous polyps before they develop into full-blown cancer.

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Breast Cancer Types

Breast cancer is diverse, with several distinct subtypes identified through genomic analysis. These subtypes have different characteristics and may respond differently to treatments.

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Inherited Cancer Risk

Individuals can inherit altered genes that increase their risk of developing certain cancers. For example, mutations in the BRCA1 or BRCA2 genes are associated with increased breast cancer risk.

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Viruses and Cancer

Some viruses can contribute to cancer development by altering the regulation of genes within infected cells. This can lead to uncontrolled cell growth.

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Alternative RNA splicing

A process where different mRNA molecules are produced from the same primary transcript, depending on which segments are treated as exons or introns.

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Why is alternative RNA splicing important?

It allows a single gene to code for multiple proteins, expanding the protein diversity of a genome without needing many genes.

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What's the connection between alternative splicing and the human genome?

Alternative splicing could explain why humans have a relatively small number of genes compared to their complex protein repertoire.

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How can translation of mRNAs be blocked?

Regulatory proteins can bind to specific sequences or structures on the mRNA, preventing translation. miRNAs can also bind to the mRNA and block translation.

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How can translation of all mRNAs in a cell be regulated?

Translation initiation factors can be simultaneously activated or deactivated in a cell, controlling the translation of all mRNAs.

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What factors influence mRNA lifespan?

The 3' untranslated region (UTR) of an mRNA molecule contains sequences determining its lifespan in the cytoplasm.

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Why is mRNA lifespan important?

mRNA lifespan helps regulate the pattern of protein synthesis in a cell.

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What are the main steps of protein processing?

After translation, polypeptides undergo processing, which includes cleavage (cutting) and chemical modifications.

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