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Questions and Answers
Which amino acids are classified as essential amino acids?
Which amino acids are classified as essential amino acids?
- Aspartate, asparagine, and proline
- Valine, leucine, isoleucine, and lysine (correct)
- Serine, threonine, and cysteine
- Glycine, alanine, and glutamate
What are branched amino acids?
What are branched amino acids?
- Phenylalanine, tyrosine, and tryptophan
- Lysine, arginine, and histidine
- Valine, leucine, and isoleucine (correct)
- Alanine, glycine, and cysteine
Which of the following amino acids is considered a sulfur-containing amino acid?
Which of the following amino acids is considered a sulfur-containing amino acid?
- Cysteine (correct)
- Glutamic acid
- Aspartic acid
- Serine
Which category of amino acids can be synthesized in amounts sufficient for adults but not for growing children?
Which category of amino acids can be synthesized in amounts sufficient for adults but not for growing children?
What do glucogenic amino acids mainly provide in the body?
What do glucogenic amino acids mainly provide in the body?
Which of the following amino acids is classified as an imino acid?
Which of the following amino acids is classified as an imino acid?
Which of the following amino acids is a nonessential amino acid?
Which of the following amino acids is a nonessential amino acid?
What term is used to describe amino acids that possess a benzene ring in their structure?
What term is used to describe amino acids that possess a benzene ring in their structure?
What determines the tertiary structure of a polypeptide chain?
What determines the tertiary structure of a polypeptide chain?
Which type of protein structure is characterized by long rodlike filaments and is relatively water-insoluble?
Which type of protein structure is characterized by long rodlike filaments and is relatively water-insoluble?
Which interaction is crucial for stabilizing the tertiary structure of globular proteins?
Which interaction is crucial for stabilizing the tertiary structure of globular proteins?
Which amino acid is exclusively ketogenic?
Which amino acid is exclusively ketogenic?
What role do disulfide bonds play in proteins?
What role do disulfide bonds play in proteins?
Where are hydrophobic amino acids generally located in a globular protein?
Where are hydrophobic amino acids generally located in a globular protein?
Which amino acids are classified as both glucogenic and ketogenic?
Which amino acids are classified as both glucogenic and ketogenic?
Which statement about glycine is true?
Which statement about glycine is true?
Which of the following proteins is classified as a globular protein?
Which of the following proteins is classified as a globular protein?
What interaction occurs between negatively charged and positively charged amino acid side chains?
What interaction occurs between negatively charged and positively charged amino acid side chains?
What roles do amino acids play in an aqueous solution?
What roles do amino acids play in an aqueous solution?
What defines monomeric proteins?
What defines monomeric proteins?
What is true about the formation of peptide bonds?
What is true about the formation of peptide bonds?
Which of the following peptides consists of three amino acids?
Which of the following peptides consists of three amino acids?
Which terminal of a peptide chain has a free amino group?
Which terminal of a peptide chain has a free amino group?
What are examples of biologically active peptides?
What are examples of biologically active peptides?
What is the primary structure of a protein defined by?
What is the primary structure of a protein defined by?
Which type of bond stabilizes the secondary structure of proteins?
Which type of bond stabilizes the secondary structure of proteins?
What is the arrangement of amino acids in a peptide chain?
What is the arrangement of amino acids in a peptide chain?
What characterizes the α-helix structure of proteins?
What characterizes the α-helix structure of proteins?
Which statement about β-sheets is true?
Which statement about β-sheets is true?
What is the tertiary structure of a protein?
What is the tertiary structure of a protein?
What type of protein structure is described as fibrous or globular?
What type of protein structure is described as fibrous or globular?
Which of the following is NOT a correct characteristic of an α-helix?
Which of the following is NOT a correct characteristic of an α-helix?
What is the term for the arrangement of multiple polypeptide chains in a protein?
What is the term for the arrangement of multiple polypeptide chains in a protein?
What type of protein structure is referred to as 'dimeric'?
What type of protein structure is referred to as 'dimeric'?
Which of the following proteins is an example of a tetramer?
Which of the following proteins is an example of a tetramer?
What is one of the effects of protein denaturation?
What is one of the effects of protein denaturation?
Which of the following is NOT a physical factor causing protein denaturation?
Which of the following is NOT a physical factor causing protein denaturation?
Which interaction holds protein subunits together in a quaternary structure?
Which interaction holds protein subunits together in a quaternary structure?
What is the significance of a native protein?
What is the significance of a native protein?
What happens to desaturated proteins regarding antibody formation?
What happens to desaturated proteins regarding antibody formation?
What is the role of glycosylation in collagen production?
What is the role of glycosylation in collagen production?
What happens to collagen when it is heated?
What happens to collagen when it is heated?
What characterizes elastin as a connective tissue protein?
What characterizes elastin as a connective tissue protein?
What is the primary deficiency associated with scurvy?
What is the primary deficiency associated with scurvy?
What is the role of α-1-antitrypsin in relation to elastin?
What is the role of α-1-antitrypsin in relation to elastin?
Which of the following statements about gelatin is true?
Which of the following statements about gelatin is true?
How does the structure of elastin differ from that of collagen?
How does the structure of elastin differ from that of collagen?
Where is elastin largely located in the human body?
Where is elastin largely located in the human body?
Flashcards
Aliphatic Amino Acids
Aliphatic Amino Acids
These amino acids contain a straight chain of carbon atoms with no ring structures. Examples include glycine, alanine, serine, and valine.
Aliphatic Neutral Amino Acids
Aliphatic Neutral Amino Acids
They include glycine, alanine, serine, threonine, cysteine, cystine, methionine, valine, leucine and isoleucine.
Aliphatic Acidic Amino Acids
Aliphatic Acidic Amino Acids
These amino acids have a carboxyl group (COOH) as part of their side chain, making them acidic.
Aliphatic Basic Amino Acids
Aliphatic Basic Amino Acids
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Aromatic Amino Acids
Aromatic Amino Acids
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Essential Amino Acids
Essential Amino Acids
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Semi-essential Amino Acids
Semi-essential Amino Acids
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Nonessential Amino Acids
Nonessential Amino Acids
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What is the primary structure of a protein?
What is the primary structure of a protein?
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What is the conformation of a protein?
What is the conformation of a protein?
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What type of bond forms the primary structure?
What type of bond forms the primary structure?
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What is the secondary structure of a protein?
What is the secondary structure of a protein?
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What is an alpha-helix?
What is an alpha-helix?
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What is a beta-sheet?
What is a beta-sheet?
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What is the tertiary structure of a protein?
What is the tertiary structure of a protein?
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What is the quaternary structure of a protein?
What is the quaternary structure of a protein?
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What makes leucine unique among amino acids?
What makes leucine unique among amino acids?
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What do glucogenic and ketogenic amino acids do?
What do glucogenic and ketogenic amino acids do?
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What makes an amino acid optically active?
What makes an amino acid optically active?
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Why is glycine an exception?
Why is glycine an exception?
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How do amino acids act as buffers?
How do amino acids act as buffers?
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How is a peptide bond formed?
How is a peptide bond formed?
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What's needed for peptide bond formation?
What's needed for peptide bond formation?
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Define peptides and their classification.
Define peptides and their classification.
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Monomeric proteins
Monomeric proteins
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Tertiary structure
Tertiary structure
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Disulfide bond
Disulfide bond
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Hydrophobic interactions
Hydrophobic interactions
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Ionic interactions
Ionic interactions
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Quaternary structure
Quaternary structure
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Fibrous proteins
Fibrous proteins
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Globular proteins
Globular proteins
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What is a dimeric protein?
What is a dimeric protein?
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What is a trimeric protein?
What is a trimeric protein?
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What is a multimeric protein?
What is a multimeric protein?
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What is protein denaturation?
What is protein denaturation?
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What is the native state of a protein?
What is the native state of a protein?
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What are some causes of protein denaturation?
What are some causes of protein denaturation?
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What are the effects of protein denaturation?
What are the effects of protein denaturation?
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Collagen
Collagen
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Glycosylation of Collagen
Glycosylation of Collagen
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Procollagen
Procollagen
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Cross-linking in Collagen
Cross-linking in Collagen
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Scurvy
Scurvy
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Elastin
Elastin
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Desmosine
Desmosine
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α-1-antitrypsin
α-1-antitrypsin
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Study Notes
Protein Chemistry
- Proteins are the most abundant and functional molecules in living systems
- Proteins are organic nitrogenous substances, formed of amino acids linked together by peptide linkages
- Life processes depend on proteins, including enzymes and polypeptide hormones in metabolism, contractile proteins for movement, collagen in bone structure, and proteins in transport (like hemoglobin) and immune function.
- Amino acids are the building blocks of proteins
- Over 300 amino acids exist in nature, but only 20 are common in mammalian proteins
- Amino acids consist of a basic amino group (-NH2) and an acidic carboxyl group (-COOH) attached to a central carbon atom (α-carbon).
- Most amino acids have a variable side chain (R group)
- At physiological pH (approximately 7.4), the carboxyl group is ionized as a carboxylate ion (-COO⁻) and the amino group is protonated as an ammonium ion (-NH₃⁺)
Amino Acid Classification
- Amino acids can be classified chemically.
- Aliphatic amino acids have aliphatic side chains and are divided into neutral, acidic, and basic groups according to the presence of amino and carboxyl groups.
- Neutral amino acids have one amino group and one carboxyl group: e.g., glycine, alanine, valine, leucine.
- Basic amino acids have more than one amino group: e.g., lysine, arginine.
- Acidic amino acids have more than one carboxyl group: e.g., aspartic acid, glutamic acid.
- Aromatic amino acids have a benzene ring in their side chain (R group): e.g., phenylalanine, tyrosine, tryptophan.
- Heterocyclic amino acids have a heterocyclic ring in their side chain (R group): e.g., histidine.
- Imino acids are characterized by an imino group (NH) in the side chain (R group): e.g., proline, hydroxyproline.
- Amino acids can also be classified based on their nutritional or metabolic roles in the body (essential, nonessential, etc.).
Proteins
- Proteins are macromolecules formed from amino acids linked together by peptide bonds.
- The structure of proteins determines their function. Proteins can be classified based on their structure (primary, secondary, tertiary, and quaternary).
- Primary structure: the sequence of amino acids in a polypeptide chain.
- Secondary structure: the local folding of the polypeptide chain (e.g., alpha-helices, beta-sheets) stabilized by hydrogen bonds.
- Tertiary structure: the overall three-dimensional structure of the polypeptide chain, stabilized by interactions between amino acid side chains (e.g., disulfide bonds, hydrophobic interactions).
- Quaternary structure: the arrangement of multiple polypeptide chains in a protein complex, stabilized by interactions between the chains.
- Proteins can be classified in different ways (based on function, nutritional value, composition).
Peptide and Protein Classification
- Some proteins are simple, consisting only of amino acids.
- Others are conjugated, meaning they also have a non-protein component called a prosthetic group.
- Examples include: nucleoproteins, glycoproteins, lipoproteins, metalloproteins, and phosphoproteins.
- Derived proteins are generated from simple or conjugated proteins by processes like denaturation or hydrolysis.
- Examples include: gelatin (derived from collagen), coagulated albumin, and globulins
Denaturation of Proteins
- Proteins are denatured with changes to structure and interactions in the protein (unfolding)
- This can result from factors like heat, chemicals, UV radiation, X-rays. heavy metals
Clinical Uses of Glutathione Supplements
- Supplements can be used in various medical conditions (aging, cancer, heart conditions)
- Antioxidants, may aid in fighting against free radicals in the body.
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