Enzyme Basics and Specificity
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Questions and Answers

What is the independent variable plotted on the x-axis in enzyme rate experiments?

  • Enzyme concentration
  • Rate of reaction
  • Substrate concentration (correct)
  • Temperature
  • Enzyme rate experiments can only measure how much product is produced.

    False (B)

    Name one factor that can be changed in enzyme rate experiments.

    Temperature, pH, enzyme concentration, or substrate concentration

    A _____ of best fit can be used to interpret or extrapolate data from enzyme rate graphs.

    <p>line</p> Signup and view all the answers

    What is the primary function of enzymes?

    <p>To speed up chemical reactions without being consumed (A)</p> Signup and view all the answers

    Enzymes can only function inside cells.

    <p>False (B)</p> Signup and view all the answers

    What is one method of measuring the rate of a reaction in enzyme experiments?

    <p>Using a gas cylinder to collect oxygen (C)</p> Signup and view all the answers

    What is the role of the active site in an enzyme?

    <p>It is where the substrate binds.</p> Signup and view all the answers

    Match the following enzyme concentration factors with their effect on reaction rate:

    <p>Increasing temperature = Increases rate up to a point Decreasing pH = Can denature the enzyme Increasing substrate concentration = Increases rate until saturation Increasing enzyme concentration = Accelerates the reaction rate</p> Signup and view all the answers

    What conclusion can be made using extrapolation from a graph?

    <p>Predictions can be made beyond the range of existing data points.</p> Signup and view all the answers

    Enzymes are classified as __________ proteins.

    <p>globular</p> Signup and view all the answers

    Match the following terms with their descriptions:

    <p>Intracellular enzymes = Function inside the cell Extracellular enzymes = Secreted by cells to act outside Biological catalyst = Substance that speeds up reactions Metabolic pathways = Series of chemical reactions controlled by enzymes</p> Signup and view all the answers

    Line graphs are not suitable for presenting the results of enzyme rate experiments.

    <p>False (B)</p> Signup and view all the answers

    Which of the following statements about enzymes is true?

    <p>Enzymes are essential for nearly every metabolic reaction in living organisms. (A)</p> Signup and view all the answers

    Enzymes can only function at specific temperatures and pH levels.

    <p>True (A)</p> Signup and view all the answers

    Name one example of an extracellular enzyme.

    <p>Digestive enzymes in the gut.</p> Signup and view all the answers

    What is the independent variable in an enzyme rate experiment that investigates the effect of temperature?

    <p>Temperature (A)</p> Signup and view all the answers

    The initial rate of reaction is represented by the final gradient of the lines on the graph.

    <p>False (B)</p> Signup and view all the answers

    What should be included when labeling the axes of a graph?

    <p>Units</p> Signup and view all the answers

    In enzyme rate experiments, a line of best-fit should be ______ and should have a balance of data points above and below it.

    <p>smooth</p> Signup and view all the answers

    Match the following aspects of graph creation with their descriptions:

    <p>Plot data points accurately = Ensure reliability of the graph Choose appropriate scales = Data fits within the graph area Label axes = Provide information about variables Draw a line of best-fit = Identify trends in the data</p> Signup and view all the answers

    When is it necessary to plot more than one set of data on the same graph?

    <p>When comparing rates at different temperatures (A)</p> Signup and view all the answers

    When creating graphs for enzyme experiments, the scales on the axes can be arbitrary.

    <p>False (B)</p> Signup and view all the answers

    What must be done if the concentration of enzyme or substrate is 0?

    <p>The reaction cannot occur.</p> Signup and view all the answers

    What happens to enzymes at extremes of pH?

    <p>They denature. (A)</p> Signup and view all the answers

    All enzymes work best at a neutral pH of 7.

    <p>False (B)</p> Signup and view all the answers

    What is the optimum pH for pepsin?

    <p>pH 2</p> Signup and view all the answers

    Enzyme-substrate complexes form less easily when the shape of the ____________ is altered.

    <p>active site</p> Signup and view all the answers

    Match the following terms related to enzyme activity:

    <p>Optimum pH = pH at which an enzyme operates best Denaturation = Loss of enzyme structure and function Active site = Region where substrate binds to enzyme Hydrogen bonds = Types of bonds that help maintain enzyme structure</p> Signup and view all the answers

    What effect do excess H+ ions in acidic solutions have on enzymes?

    <p>They can break ionic and hydrogen bonds in the enzyme. (C)</p> Signup and view all the answers

    Once an enzyme is denatured, it can regain its original function.

    <p>False (B)</p> Signup and view all the answers

    What are the two types of ions in alkaline solutions that can affect enzyme structure?

    <p>OH- ions</p> Signup and view all the answers

    Which statement is true regarding competitive inhibitors?

    <p>They compete with the substrate for the active site. (B)</p> Signup and view all the answers

    Non-competitive inhibitors can be overcome by increasing substrate concentration.

    <p>False (B)</p> Signup and view all the answers

    What is the effect of increasing inhibitor concentration on the rate of reaction?

    <p>It reduces the rate of reaction and can stop it completely.</p> Signup and view all the answers

    The shape of the active site is altered by __________ inhibitors.

    <p>non-competitive</p> Signup and view all the answers

    What happens to the amount of product produced by a competitive inhibitor compared to the reaction without the inhibitor?

    <p>It remains the same at maximal rates. (D)</p> Signup and view all the answers

    Match the type of inhibitor to its effect on enzyme activity:

    <p>Competitive Inhibitor = Initial rate lowered but maximal rate unchanged Non-competitive Inhibitor = Both initial and maximal rates lowered</p> Signup and view all the answers

    Increasing the concentration of a __________ can sometimes compensate for a competitive inhibitor.

    <p>substrate</p> Signup and view all the answers

    What is the role of an inhibitor in an enzyme-catalysed reaction?

    <p>To slow down or stop enzyme activity.</p> Signup and view all the answers

    What does the lock and key model suggest about enzyme action?

    <p>The active site and substrate fit together perfectly. (A)</p> Signup and view all the answers

    The induced fit model suggests that the active site of the enzyme is rigid.

    <p>False (B)</p> Signup and view all the answers

    What technique provides 3D images that confirm changes in enzyme shape?

    <p>X-ray diffraction</p> Signup and view all the answers

    The ___ movement of an enzyme occurs when a substrate binds to it.

    <p>larger</p> Signup and view all the answers

    Match the following models of enzyme action with their descriptions:

    <p>Lock and Key Model = Active site shape is a perfect fit for the substrate Induced Fit Model = Active site changes shape to fit the substrate Rigid Model = Suggests that proteins do not change shape Flexible Model = Allow for movements in enzyme structure</p> Signup and view all the answers

    What was a primary limitation of the lock and key model?

    <p>It doesn't account for the dynamic nature of enzyme structure. (A)</p> Signup and view all the answers

    New research has disproven the lock and key model in favor of the induced fit model.

    <p>True (A)</p> Signup and view all the answers

    What is the primary change in an enzyme when its substrate binds to it according to the induced fit model?

    <p>The active site changes shape.</p> Signup and view all the answers

    Flashcards

    Enzyme rate experiments

    Experiments to find out how changing a factor affects how quickly an enzyme-controlled reaction happens.

    Independent variable

    The factor you change in an experiment to see its effect on the reaction rate.

    Dependent variable

    The factor that changes in response to the independent variable; the thing you measure.

    Line graph

    A graph used to show how the reaction rate changes.

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    Line of best fit

    A line drawn on a graph to show the overall trend of the data.

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    Interpolation

    Predicting a value between existing data points on a graph.

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    Extrapolation

    Estimating a value beyond the range of existing data points.

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    Enzyme concentration

    Amount of enzyme present in a reaction

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    Enzyme

    A biological catalyst that speeds up chemical reactions without being consumed.

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    Enzyme Specificity

    Enzymes have a specific shape (active site) that only fits certain substrates.

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    Active Site

    The part of an enzyme where the substrate binds, crucial for enzyme function.

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    Intracellular enzyme

    An enzyme that works inside the cell.

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    Extracellular enzyme

    An enzyme that works outside the cell.

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    Globular protein

    A protein with a 3D spherical shape, many enzymes are this type.

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    Biological Catalyst

    A substance that speeds up a chemical reaction without being consumed.

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    Metabolic pathway

    A series of chemical reactions controlled by enzymes to achieve a specific result or target

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    Enzyme rate experiment graph

    A graph showing the results of an enzyme experiment, where the independent variable (e.g., substrate concentration) affects the rate of reaction.

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    Multiple lines on a graph

    A graph that displays data from various conditions (e.g., different temperatures) on a single graph.

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    Initial rate of reaction

    The rate of reaction at the beginning of an experiment (determined by the initial gradient of a graph).

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    Volume of product

    The amount of product created in an experiment, often plotted on the y-axis of an enzyme experiment graph instead of reaction rate.

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    Appropriate linear scales

    Scales on the axes of a graph that effectively show all data points.

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    Graph labeling

    Clearly labeling the axes of a graph with the variables and their units (e.g., temperature in °C).

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    Lock and Key Model

    A model proposing that the active site of an enzyme has a rigid shape perfectly complementary to the substrate, like a lock and key.

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    Induced Fit Model

    A more refined model that suggests the active site of an enzyme adapts its shape to fit the substrate upon binding, like a glove around a hand.

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    What is the key difference between the Lock & Key and Induced Fit model?

    The Lock & Key model proposes a rigid shape for the active site, while the Induced Fit model suggests the active site can change its shape to accommodate the substrate.

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    How does X-ray diffraction support the Induced Fit Model?

    X-ray diffraction allows scientists to visualize molecules in 3D, demonstrating the enzyme's shape change before and after the substrate binds.

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    Optimum pH

    The specific pH value at which an enzyme functions most efficiently.

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    Enzyme Denaturation

    The process where an enzyme's structure is permanently altered, losing its functionality.

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    What is the purpose of an enzyme's active site?

    The active site is where the substrate binds and the chemical reaction occurs, enabling enzymes to facilitate specific reactions.

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    What is the significance of enzyme movement?

    Enzymes are not rigid structures: they display movement in response to environmental changes, particularly when interacting with substrates.

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    Effect of pH on Enzyme Activity

    Extreme pH levels can disrupt the hydrogen and ionic bonds holding the enzyme's structure together, leading to denaturation.

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    How do enzymes contribute to biological processes?

    Enzymes act as biological catalysts, speeding up chemical reactions in living organisms, enabling vital biological processes.

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    Pepsin and its Optimum pH

    Pepsin, an enzyme in the stomach, has an optimum pH of 2 due to the acidic environment created by hydrochloric acid.

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    Enzyme's Optimum Environment

    The best environment for an enzyme is determined by its specific optimum pH, reflecting where it naturally functions.

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    What does it mean for an enzyme to be specific?

    Each enzyme has a specific shape that only fits certain substrates, allowing for precise control of biochemical reactions.

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    pH Extremes and Enzyme Activity

    When pH is too high or too low, the enzyme's active site is distorted, hindering its ability to bind to the substrate.

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    Effect of H+ and OH- Ions

    Excess H+ ions (acidic) or OH- ions (basic) disrupt the enzyme's structure by affecting the bonds holding it together.

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    Complete Denaturation

    At extreme pH, the enzyme's structure is completely altered, rendering it incapable of catalyzing any reactions.

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    Competitive Inhibitors

    Molecules that resemble the substrate and compete for the active site of an enzyme, slowing down or stopping the reaction.

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    Non-Competitive Inhibitors

    Molecules that bind to a different site on the enzyme, changing the active site's shape and preventing substrate binding.

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    How do inhibitors affect reaction rate?

    Inhibitors slow down or stop enzyme-catalyzed reactions by reducing the formation of enzyme-substrate complexes.

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    Effect of increasing inhibitor concentration

    Increasing inhibitor concentration leads to a slower reaction rate and eventual complete stoppage of the reaction.

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    Effect of substrate concentration on competitive inhibitors

    Increasing substrate concentration can overcome the effects of competitive inhibitors by outcompeting them for the active site.

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    Effect of substrate concentration on non-competitive inhibitors

    Increasing substrate concentration does not restore the reaction rate in the presence of non-competitive inhibitors, as the active site's shape remains altered.

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    Competitive vs. Non-competitive inhibitor effect on maximal rate

    Competitive inhibitors decrease the initial reaction rate but do not affect the maximal rate. Non-competitive inhibitors decrease both the initial and maximal reaction rates.

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    How to distinguish competitive vs. non-competitive inhibitors

    Investigate how increasing substrate concentration affects the reaction rate. If the rate increases, it is a competitive inhibitor. If the rate remains low, it is a non-competitive inhibitor.

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    Study Notes

    Enzyme Basics

    • Enzymes are biological catalysts, speeding up reactions without being changed
    • They are globular proteins
    • Active sites are crucial for substrate binding
    • Enzymes are specific due to the complementary shapes of active sites and substrates

    Enzyme Specificity

    • Active sites have a precise shape to fit a specific substrate.
    • Extreme changes in temperature or pH can denature enzymes, altering active site shape.
    • This prevents substrate binding and thus, halts the reaction

    Enzyme Action

    • The lock-and-key model describes enzymes as rigid structures that fit precisely into substrates.
    • The induced-fit model is the more current model. It suggests the enzyme's active site changes shape slightly to accommodate substrate.
    • This improves binding and facilitates the reaction.

    Enzyme Rate Experiments

    • Enzyme reactions can be studied by measuring product formation or substrate disappearance.
    • Factors influencing enzyme activity are often investigated, such as temperature, pH, enzyme concentration, substrate concentration and inhibitors.
    • Precise measurements are integral and need to account for uncertainty.

    Limiting Factors

    • Temperature: Higher temperatures increase reaction rates, but very high temps lead to enzyme denaturation.
    • pH: Enzymes have an optimal pH; deviations can cause denaturation.
    • Enzyme concentration: Increasing the enzyme concentration increases the reaction rate at first until the substrate becomes the limiting factor.
    • Substrate concentration: Increasing the substrate concentration initially increases the reaction rate, but will plateau when all enzyme active sites are saturated.
    • Inhibitors: Inhibitors (competitive and noncompetitive) bind to the enzyme and decrease reaction rates. Enzyme inhibitors can be either reversible or irreversible.

    Practical Skills

    • Controlling variables: Researchers must carefully hold many aspects of an experiment constant to ensure only the one independent variable being studied affects the reaction rate.
    • Calculating uncertainty: Determining the margin of error in measurements is important for reliable results.

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    Description

    This quiz covers the fundamentals of enzyme action, including enzyme specificity and the mechanisms by which they function. You'll explore the lock-and-key and induced-fit models, as well as factors affecting enzyme activity. Test your knowledge and deepen your understanding of these vital biological catalysts.

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