Podcast
Questions and Answers
What is the effect of allosteric activators on enzyme activity?
What is the effect of allosteric activators on enzyme activity?
- Activators decrease the affinity of the enzyme for the substrate.
- Activators increase the rate of enzyme synthesis.
- Activators directly bind to the active site of the enzyme.
- Activators increase the affinity of the enzyme for the substrate. (correct)
What is a key difference between non-competitive inhibition and transcriptional control of enzyme activity?
What is a key difference between non-competitive inhibition and transcriptional control of enzyme activity?
- Non-competitive inhibition is reversible, while transcriptional control is irreversible.
- Non-competitive inhibition affects protein synthesis, while transcriptional control affects protein breakdown.
- Non-competitive inhibition directly affects the enzyme's active site, while transcriptional control indirectly affects enzyme levels. (correct)
- Non-competitive inhibition is long-term, while transcriptional control is short-term.
Which of the following is NOT a post-translational modification that can control enzyme activity?
Which of the following is NOT a post-translational modification that can control enzyme activity?
- Acetylation
- Phosphorylation
- Glycosylation (correct)
- Methylation
Which state of an enzyme has a higher affinity for its substrate?
Which state of an enzyme has a higher affinity for its substrate?
What is the significance of enzyme turnover in regulating enzyme activity?
What is the significance of enzyme turnover in regulating enzyme activity?
What is the relationship between bond strength and potential energy?
What is the relationship between bond strength and potential energy?
When a reaction is exothermic, what is the relationship between the enthalpy of the reactants and the enthalpy of the products?
When a reaction is exothermic, what is the relationship between the enthalpy of the reactants and the enthalpy of the products?
What is the relationship between the change in free energy (deltaG) and the spontaneity of a reaction?
What is the relationship between the change in free energy (deltaG) and the spontaneity of a reaction?
Which of the following is an example of an endergonic reaction?
Which of the following is an example of an endergonic reaction?
What is the role of high-energy intermediates in metabolic reactions?
What is the role of high-energy intermediates in metabolic reactions?
What is the change in free energy for a reaction that has an enthalpy change of -50 kJ/mol and an entropy change of +100 J/mol*K at a temperature of 298 K?
What is the change in free energy for a reaction that has an enthalpy change of -50 kJ/mol and an entropy change of +100 J/mol*K at a temperature of 298 K?
Which of the following is not a characteristic of an exergonic reaction?
Which of the following is not a characteristic of an exergonic reaction?
Which statement correctly describes the relationship between the change in entropy (deltaS) and the randomness of a reaction?
Which statement correctly describes the relationship between the change in entropy (deltaS) and the randomness of a reaction?
What is the net effect of the conversion of succinyl-CoA into succinate?
What is the net effect of the conversion of succinyl-CoA into succinate?
Which enzyme catalyzes the oxidative decarboxylation of alpha-ketoglutarate to succinyl-CoA?
Which enzyme catalyzes the oxidative decarboxylation of alpha-ketoglutarate to succinyl-CoA?
Which of the following statements accurately describes the role of FAD in the TCA cycle?
Which of the following statements accurately describes the role of FAD in the TCA cycle?
Which of the following processes is directly involved in replenishing TCA cycle intermediates?
Which of the following processes is directly involved in replenishing TCA cycle intermediates?
Which of the following molecules acts as an allosteric activator of the TCA cycle?
Which of the following molecules acts as an allosteric activator of the TCA cycle?
How does citrate accumulation affect the TCA cycle?
How does citrate accumulation affect the TCA cycle?
Which step of the TCA cycle involves a direct phosphorylation of GDP?
Which step of the TCA cycle involves a direct phosphorylation of GDP?
Which of the following statements accurately describes the regulation of the TCA cycle?
Which of the following statements accurately describes the regulation of the TCA cycle?
What is the primary function of thermogenin in brown adipose tissue?
What is the primary function of thermogenin in brown adipose tissue?
Which compound is known to generate heat similar to thermogenin?
Which compound is known to generate heat similar to thermogenin?
What is a major consequence of using DNP as a weight loss supplement?
What is a major consequence of using DNP as a weight loss supplement?
What occurs when complex IV inhibitors, such as carbon monoxide, are present in the cell?
What occurs when complex IV inhibitors, such as carbon monoxide, are present in the cell?
What is the effect of a Complex I inhibitor like rotenone?
What is the effect of a Complex I inhibitor like rotenone?
What is the primary function of the gamma subunit in ATP synthase?
What is the primary function of the gamma subunit in ATP synthase?
Which statement accurately describes the malate-aspartate shuttle?
Which statement accurately describes the malate-aspartate shuttle?
What is the purpose of the glycerol-3-phosphate shuttle?
What is the purpose of the glycerol-3-phosphate shuttle?
What occurs during the tight conformation of ATP synthase?
What occurs during the tight conformation of ATP synthase?
Which of the following correctly describes the mechanism of oxidative phosphorylation?
Which of the following correctly describes the mechanism of oxidative phosphorylation?
How do chemical uncouplers affect ATP synthesis?
How do chemical uncouplers affect ATP synthesis?
Which process is used to transport electrons across the inner mitochondrial membrane when NADH cannot directly cross?
Which process is used to transport electrons across the inner mitochondrial membrane when NADH cannot directly cross?
What confirms that the inner mitochondrial membrane is impermeable to NADH?
What confirms that the inner mitochondrial membrane is impermeable to NADH?
Which molecule is a direct inhibitor of the PDH complex?
Which molecule is a direct inhibitor of the PDH complex?
Which of the following is NOT a direct activator of PDH phosphatase?
Which of the following is NOT a direct activator of PDH phosphatase?
In the reaction catalyzed by isocitrate dehydrogenase, which molecule is reduced?
In the reaction catalyzed by isocitrate dehydrogenase, which molecule is reduced?
Which of the following statements about the TCA cycle is CORRECT?
Which of the following statements about the TCA cycle is CORRECT?
What is the role of the lipoic domain in the PDH complex?
What is the role of the lipoic domain in the PDH complex?
Which of the following statements about the regulation of the PDH complex is CORRECT?
Which of the following statements about the regulation of the PDH complex is CORRECT?
What is the net yield of ATP from the complete oxidation of one molecule of acetyl-CoA in the TCA cycle?
What is the net yield of ATP from the complete oxidation of one molecule of acetyl-CoA in the TCA cycle?
Which step in the TCA cycle is irreversible and involves the hydrolysis of a thioester bond?
Which step in the TCA cycle is irreversible and involves the hydrolysis of a thioester bond?
Flashcards
Non-competitive inhibition
Non-competitive inhibition
Inhibition where a ligand binds to a site other than the active site, altering enzyme structure and function.
T state (tense state)
T state (tense state)
The form of an enzyme with low or no affinity for its substrate.
R state (relaxed state)
R state (relaxed state)
The form of an enzyme with high affinity for its substrate, allowing efficient binding.
Post-translational modifications
Post-translational modifications
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Enzyme turnover
Enzyme turnover
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Thermodynamics
Thermodynamics
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Delta G (ΔG)
Delta G (ΔG)
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Exothermic reaction
Exothermic reaction
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Endothermic reaction
Endothermic reaction
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Anabolic reactions
Anabolic reactions
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Catabolic reactions
Catabolic reactions
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Free energy and spontaneity
Free energy and spontaneity
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Coupled reactions
Coupled reactions
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ATP synthase
ATP synthase
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F0 component
F0 component
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Alpha-beta dimers
Alpha-beta dimers
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Malate-aspartate shuttle
Malate-aspartate shuttle
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Glycerol-3-phosphate shuttle
Glycerol-3-phosphate shuttle
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Uncoupling proteins
Uncoupling proteins
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Oxidative phosphorylation
Oxidative phosphorylation
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Proton motive force
Proton motive force
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Thermogenin (UCP1)
Thermogenin (UCP1)
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DNP (2,4-dinitrophenol)
DNP (2,4-dinitrophenol)
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Complex I inhibitor
Complex I inhibitor
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Complex IV inhibitors
Complex IV inhibitors
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Chemical uncoupling
Chemical uncoupling
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Oxidative decarboxylation
Oxidative decarboxylation
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Succinyl-CoA synthetase
Succinyl-CoA synthetase
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Succinate dehydrogenase
Succinate dehydrogenase
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Fumarase
Fumarase
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Malate dehydrogenase
Malate dehydrogenase
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TCA cycle regulation
TCA cycle regulation
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Citrate inhibition
Citrate inhibition
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Amphibolic pathway
Amphibolic pathway
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Transesterification
Transesterification
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Lipoic Domain
Lipoic Domain
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PDH Inhibition
PDH Inhibition
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PDH Kinase Activation
PDH Kinase Activation
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Calcium's Role
Calcium's Role
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TCA Cycle Products
TCA Cycle Products
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Citrate Synthase
Citrate Synthase
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Irreversible Reactions in TCA
Irreversible Reactions in TCA
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Study Notes
Metabolism Overview
- Metabolism encompasses all biochemical processes involved in synthesis (anabolism), breakdown (catabolism), and conversion of constituents within cells and organisms.
- It's crucial for understanding bodily functions, societal issues like obesity, and medical discoveries.
Why Study Metabolism?
- Understanding how our bodies function is essential, including the socioeconomic implications of obesity and diabetes.
- Medical discoveries, including genetic diseases affecting metabolic processes, are vital research areas.
Metabolic Pathways
- Biochemical processes use electron carriers for energy generation.
- Catabolism breaks down energy-containing nutrients (carbs, fats, proteins) into simpler, low-energy molecules, generating energy (e.g., ATP).
- Anabolism synthesizes complex molecules (e.g., proteins, polysaccharides, lipids) from simpler precursors, utilizing energy (e.g., ATP).
Control Measures of Metabolism
- Metabolic pathways are compartmentalized within cells and tissues. This compartmentalization allows for regulated metabolic activity.
- Thermodynamics governs the energy changes in metabolic processes, with favorable reactions releasing energy (exergonic) and unfavorable reactions requiring energy input (endergonic).
Energy-Currency
- Energy is absorbed to break a bond, energy is released when a bond is formed. Stronger bonds generally have higher energy.
- ATP is a crucial energy carrier in metabolic reactions.
Cell-to-Cell Communication
- Cells communicate and regulate metabolism through various methods including metabolite sensing.
- Segregation and selective transport of metabolites between cells control various metabolic processes.
Inhibition and Control
- Enzymes catalyze metabolic reactions, lowering the activation energy to enable these reactions to occur efficiently.
- Inhibition mechanisms, both competitive and non-competitive (allosteric), are key for controlling metabolic activity.
Enzyme Turnover
- Enzymes are not constantly present in a cell. Enzyme activity can depend on the enzyme half-life, which can be regulated.
- The appropriate duration of activity or enzyme presence is crucial for regulating biological processes and maintaining homeostasis.
Carbohydrates and Glycolysis
- Carbohydrates are a primary energy source in non-photosynthetic cells.
- Monosaccharides are single sugar units (e.g., glucose).
- Disaccharides are two sugars joined together.
- Polysaccharides are complex carbohydrates (e.g., glycogen).
- Glycolysis is the process of breaking down glucose to produce energy.
Aerobic and Anerobic Glycolysis
- Glycolysis can occur aerobically (with oxygen) or anaerobically (without oxygen).
- Aerobic glycolysis produces a higher yield of energy (ATP).
- Anaerobic glycolysis produces lactic acid (in humans) as a byproduct.
Gluconeogenesis
- Gluconeogenesis is the process of synthesizing glucose from non-carbohydrate precursors (e.g., lactate, amino acids).
- It's the reverse of glycolysis and is vital for maintaining blood glucose levels when carbohydrate intake is insufficient.
Glycogen Metabolism
- Glycogen is a storage form of glucose in animals.
- Glycogenesis is the process of glycogen synthesis.
- Glycogenolysis is the process of glycogen breakdown.
Regulation of Metabolism
- Metabolic processes are carefully regulated by various factors, including hormonal control via signals like glucagon and insulin.
- The control of metabolic rate is essential for maintaining blood glucose levels and regulating bodily functions.
- Cells must control the amounts of enzymes present and/or the activity of enzymes to adjust their metabolic activity.
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