DNA, RNA, and Protein Synthesis Quiz
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Replication

Before a cell divides, it duplicates its DNA in a copying process called replication during the S phase of the cell cycle. Product of this process is DNA.

Transcription

The process of copying a base sequence from DNA to RNA. Product is RNA

Translation

Decoding of a mRNA message into a polypeptide chain (protein). Product is protein

In replication, the resulting DNA strands contain what combination of old and new strands?

One of the original strands and one new strand

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What is a nucleotide in DNA composed of?

Sugar molecule, a nitrogen-containing base, and a phosphate group

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What are the two pyrimidines?

Cytosine (C) and Thymine (T). In RNA, T is replaced by uracil (U)

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What are the two purines?

Adenine (A) and Guanine (G)

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Three main differences between DNA and RNA

  1. the sugar in RNA is ribose instead of deoxyribose 2) RNA is generally single-stranded 3) RNA contains uracil in place of thymine
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What is a codon?

a three-nucleotide sequence that codes for an amino acid

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How many codons per amino acid?

One codon per amino acid

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How many codons are needed to specify twelve amino acids?

12 (that would be 36 nucleotides)

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Types of RNA

messenger RNA (mRNA), transfer RNA (tRNA), ribosomal RNA (rRNA)

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What two enzymes aid in replication?

DNA polymerase and DNA helicase

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The key enzyme in transcription is

RNA polymerase

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Anticodon

group of three bases on a tRNA molecule that are complementary to an mRNA codon

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If an anticodon is UAA, what is the complementary codon?

AUU

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What causes translation to stop?

Stop codon on mRNA

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What must happen to a DNA molecule before RNA can be made?

DNA must unzip so that one chain is available for transcription, then it is transcribed into mRNA

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Name alll 4 scientists responsible for decyphering the DNA molecule

Francis Crick, James Watson, Maurice Wilkins, and Rosalind Franklin

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Three types of mutations

deletion, insertion, substitution

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Deletion mutation

One nucleotide is deleted

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Insertion mutation

One nucleotide is added

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Substitution mutation

one nucleotide is substituted for another

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__________ is a start codon, it codes for methionine

AUG

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Two strands of DNA are called ___ strands

Complementary or collinear

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All mutations can cause serious problems but which one is the LEAST bad?

A substitution is not as bad, because you might get away with a substitution if you still code for the same amino acid. With insertions and deletions, you are in trouble. The protein will not be made at all most likely, or will be defective

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Transformation

process in which one strain of bacteria is changed by a gene or genes from another strain of bacteria

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What is the transforming factor

DNA, which stores and transmits genetic information from one generation to the next.

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Bacteriophage

kind of virus that infects bacteria

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Role of DNA

storing, copying, and expresing information (information coded in DNA contains instructions to produce proteins)

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Central Dogma of Molecular Biology

DNA -> RNA -> Protein

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Chargaff's Rule

A=T and C=G

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Technique that Franklin used to study DNA structure

x-ray defraction, proves that DNA is helikal

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antiparallel strands

Strands parallel to each other going in opposite directions (3'-5' and 5'-3')

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What forces hold the two strands of DNA together?

hydrogen bonds

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Base pairing

principle that bonds in DNA can form only between adenine and thymine and between guanine and cytosine. this explains chargaff's rule

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Role of DNA polymerase

synthesizes new DNA strand by adding nucleotides covalently to the 3' end of a primer/ DNA strand.

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Telomeres

DNA at the tips of eukaryotic chromosomes

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Telomerase

An enzyme that catalyzes the lengthening of telomeres in eukaryotic germ cells. Adds short DNA sequences to telomeres as chromosomes are replicated

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Role of telomerase in rapidly dividing cells

Helps to prevent loss or damage to genes near the ends of the chromosomes

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In adult cells, telomerase is often

Switched off, except cancer cells, allowing thyem to grow rapidly

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Histones

protein molecules around which DNA is tightly coiled in chromatin

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Chromatin

Clusters of DNA, RNA, and proteins in the nucleus of a cell

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Prokaryotic DNA replication

starts in a single spot and goes around in 2 directions until the entire chromosome is copied

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Eukaryotic DNA replication

begins at many different spots on the DNA molecule and proceeds in 2 directions until the entire chromosome is copied

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The two copies of DNA separate in which phase of cell division

Anaphase

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Location of DNA in eukaryotes vs. prokaryotes

Nucleus vs. cytoplasm

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Study Notes

DNA, RNA, and Protein Synthesis

  • Replication: A cell duplicates its DNA during the S phase of the cell cycle. The result is two identical DNA molecules, each containing one original and one new strand. Key enzymes involved are DNA polymerase and DNA helicase.
  • Transcription: A process of copying a base sequence from DNA to RNA. The product is RNA. The key enzyme is RNA polymerase.
  • Translation: Decoding of an mRNA message into a polypeptide chain (protein). The product is a protein. Ribosomes, mRNA, and tRNA are crucial in this process.
  • Nucleotide Structure (DNA): A nucleotide is comprised of a sugar molecule, a nitrogen-containing base, and a phosphate group.
  • Pyrimidines: Cytosine (C) and Thymine (T). In RNA, Uracil (U) substitutes for Thymine.
  • Purines: Adenine (A) and Guanine (G).
  • DNA vs. RNA Differences: RNA uses ribose sugar instead of deoxyribose, RNA is typically single-stranded, and Uracil replaces Thymine in RNA.
  • Codons: A three-nucleotide sequence that codes for an amino acid.
  • Codons per amino acid: One codon specifies a single amino acid.
  • Number of codons for many amino acids: The number of codons needed to code for a specific number of amino acids would be that quantity multiplied by 3.
  • Types of RNA: Messenger RNA (mRNA), transfer RNA (tRNA), and ribosomal RNA (rRNA).
  • Anticodon: A three-base sequence on tRNA that is complementary to an mRNA codon.
  • Codon-Anticodon Example: If an anticodon is UAA, the complementary codon is AUU.
  • Translation Termination: Translation stops when a stop codon on the mRNA is reached.
  • DNA to RNA Process: DNA must unzip to allow one strand to act as a template for transcription into mRNA.
  • DNA Scientists: Francis Crick, James Watson, Maurice Wilkins, and Rosalind Franklin elucidated the structure of DNA, though Franklin's contributions were often overlooked.
  • Types of Mutations: Deletions, insertions, and substitutions.
  • Deletion Mutation: Loss of one nucleotide.
  • Insertion Mutation: Addition of one nucleotide.
  • Substitution Mutation: Replacement of one nucleotide with another.
  • Start Codon: AUG, specifying methionine.
  • DNA Strands: Two DNA strands are called complementary or collinear strands.
  • Least problematic mutation type: Substitutions could be less problematic than insertions or deletions because they preserve the frame.
  • Transformation: A change in bacteria that is caused by genes from another strain/a source.
  • Transforming Factor: DNA.
  • Bacteriophage: Viruses that infect bacteria.
  • DNA Role: Storing, copying, and expressing information (instructions to produce proteins).
  • Central Dogma: DNA → RNA → Protein.
  • Chargaff's Rule: A=T and C=G (Base pairing).
  • Franklin's Technique: X-ray diffraction, which determined that DNA has a helical structure.
  • Antiparallel Strands: The two strands of DNA run in opposite directions (3' to 5' and 5' to 3').
  • DNA Strand Bonding: Hydrogen bonds hold the two DNA strands together.
  • Base Pairing Principle: Adenine bonds with Thymine, and Guanine bonds with Cytosine.
  • DNA Polymerase Role: Synthesizes new DNA strands by adding nucleotides to the 3' end of a primer.
  • Telomeres: DNA at the tips of eukaryotic chromosomes.
  • Telomerase: Lengthens telomeres in germ cells, preventing loss of genes.
  • Telomerase in Adult Cells: Often inactive, except in cancer cells, allowing for rapid cell division.
  • Histones: Proteins around which DNA is tightly coiled in chromatin.
  • Chromatin: DNA, RNA, and associated proteins in the nucleus.
  • Prokaryotic Replication: Begins at one spot, proceeds in two directions.
  • Eukaryotic Replication: Begins at multiple spots, proceeds in two directions.
  • DNA Separation (Cell Division): Separates during anaphase of cell division.
  • DNA Location (Eukaryotes vs. Prokaryotes): Eukaryotic DNA is in the nucleus, prokaryotic DNA is in the cytoplasm.
  • Decoding Genetic Instructions: Copying part of the DNA base sequence to RNA.
  • mRNA Role: Carries genetic information from DNA to ribosomes.
  • tRNA Role: Carries amino acids to ribosomes.
  • rRNA Role: Forms ribosomes for protein synthesis.
  • Promoters: DNA segments where RNA polymerase binds for transcription.
  • Introns: Non-coding segments of DNA that are removed from the final mRNA.
  • Exons: Coding segments of eukaryotic DNA, rejoined to form the final mRNA.
  • Genetic Code: Collection of mRNA codons that specify amino acids.
  • Codons per amino acid (variability): Each amino acid may correspond to several codons.
  • Special Codons: Start and stop codons.
  • Protein Synthesis Role of Ribosomes: Ribosomes use the mRNA sequence to assemble amino acids into polypeptide chains.
  • tRNA and Amino Acid Delivery: tRNA molecules bring the correct amino acids to the ribosome during translation.
  • Anticodon Location: tRNA
  • Prokaryotic Gene Regulation: DNA-binding proteins control gene transcription.
  • Operon: A group of genes regulated together.
  • Operator: DNA segment that controls gene access to RNA polymerase.
  • Transcription Factors: Regulatory proteins that bind to DNA, affecting gene transcription and expression.
  • Differentiation: The process of cells becoming specialized.
  • Homeotic Genes: Genes responsible for determining the body plan's general features
  • Homeobox Genes: Code for transcription factors, regulating development via gene expression.
  • Master Control Genes: Genes that act like switches, triggering developmental patterns.
  • Epigenetics: Changes in gene expression without changing the DNA sequence.
  • Mutation Effects on DNA: Changes in nucleotide sequences or chromosome structure.
  • Mutation Definitions: A permanent change in the DNA sequence.
  • Silent Mutation: No change in the amino acid sequence.
  • Missense Mutation: Change in amino acid.
  • Nonsense Mutation: Changes a codon to a stop codon.
  • Frameshift Mutation: Insertion or deletion of nucleotides, altering the reading frame.
  • Chromosomal Mutations: Changes in chromosome structure (deletion, duplication, inversion, translocation).
  • Mutagens: Chemical or physical agents causing mutations (radiation, chemicals).
  • Mutation Types: Spontaneous or induced (environmentally caused).
  • Helpful Mutation Effects: Proteins with new functions, adaptable in changes in environments.
  • Polyploidy: Extra chromosome sets in an organism; can be beneficial in some crops.

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Test your knowledge on the essential processes of DNA replication, transcription, and translation. Explore the structural differences between DNA and RNA, as well as the roles of various nucleotides and enzymes involved in protein synthesis.

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