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Questions and Answers
What is the role of helicases during DNA replication?
What is the role of helicases during DNA replication?
What is the function of single-strand binding proteins in DNA replication?
What is the function of single-strand binding proteins in DNA replication?
Which enzyme is responsible for relieving the strain of twisting in the DNA double helix?
Which enzyme is responsible for relieving the strain of twisting in the DNA double helix?
What is the source of the initial nucleotide chain needed for DNA synthesis?
What is the source of the initial nucleotide chain needed for DNA synthesis?
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What is the significance of the 3′ end of the RNA primer in DNA replication?
What is the significance of the 3′ end of the RNA primer in DNA replication?
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What was the first evidence that DNA is the genetic material?
What was the first evidence that DNA is the genetic material?
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What is the typical length of the completed RNA primer in DNA replication?
What is the typical length of the completed RNA primer in DNA replication?
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Which of the following is NOT a protein involved in the initiation of DNA replication?
Which of the following is NOT a protein involved in the initiation of DNA replication?
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What term describes the change in genotype and phenotype due to assimilation of foreign DNA?
What term describes the change in genotype and phenotype due to assimilation of foreign DNA?
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Who were the researchers that confirmed DNA as the transforming substance in Griffith's experiment?
Who were the researchers that confirmed DNA as the transforming substance in Griffith's experiment?
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During DNA replication, the replication fork forms a Y-shaped region. What occurs at this junction?
During DNA replication, the replication fork forms a Y-shaped region. What occurs at this junction?
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What type of viruses did studies reveal more evidence for DNA as the genetic material?
What type of viruses did studies reveal more evidence for DNA as the genetic material?
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What is the main component of a virus according to the evidence presented?
What is the main component of a virus according to the evidence presented?
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Which experimental observation by Griffith led to his conclusion about the nature of the genetic material?
Which experimental observation by Griffith led to his conclusion about the nature of the genetic material?
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Why were many biologists skeptical about DNA being the genetic material initially?
Why were many biologists skeptical about DNA being the genetic material initially?
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How do bacteriophages contribute to genetic understanding?
How do bacteriophages contribute to genetic understanding?
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What is the direction in which new DNA strands can elongate?
What is the direction in which new DNA strands can elongate?
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Which of the following statements about DNA polymerases is correct?
Which of the following statements about DNA polymerases is correct?
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What are Okazaki fragments?
What are Okazaki fragments?
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How do DNA polymerases add nucleotides to a growing strand?
How do DNA polymerases add nucleotides to a growing strand?
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What is the primary function of DNA ligase during DNA replication?
What is the primary function of DNA ligase during DNA replication?
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What is the approximate rate of elongation for DNA synthesis in human cells?
What is the approximate rate of elongation for DNA synthesis in human cells?
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What characterizes the leading strand during DNA replication?
What characterizes the leading strand during DNA replication?
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Why must DNA polymerase work in the opposite direction on the lagging strand?
Why must DNA polymerase work in the opposite direction on the lagging strand?
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What is the primary purpose of DNA replication?
What is the primary purpose of DNA replication?
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What is the term used to describe the type of DNA replication where each strand serves as a template for a new strand?
What is the term used to describe the type of DNA replication where each strand serves as a template for a new strand?
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How does DNA replication begin?
How does DNA replication begin?
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Which statement accurately describes the participation of enzymes in DNA replication?
Which statement accurately describes the participation of enzymes in DNA replication?
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Which characteristic of DNA replication is highlighted by its mechanism?
Which characteristic of DNA replication is highlighted by its mechanism?
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What structure is formed when DNA is combined with proteins in eukaryotic cells?
What structure is formed when DNA is combined with proteins in eukaryotic cells?
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Which proteins are primarily responsible for the DNA packing in interphase chromatin?
Which proteins are primarily responsible for the DNA packing in interphase chromatin?
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What is the term for changes in chromatin condensation that affect gene expression?
What is the term for changes in chromatin condensation that affect gene expression?
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Which of the following can induce epigenetic changes that may be inherited?
Which of the following can induce epigenetic changes that may be inherited?
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How can a mother's diet during pregnancy affect her child?
How can a mother's diet during pregnancy affect her child?
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What is a potential effect of intergenerational trauma on descendants?
What is a potential effect of intergenerational trauma on descendants?
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What happens to chromosomes in the nucleus?
What happens to chromosomes in the nucleus?
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What is primarily affected by epigenetic changes?
What is primarily affected by epigenetic changes?
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What is the role of a nuclease in nucleotide excision repair?
What is the role of a nuclease in nucleotide excision repair?
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What happens to DNA molecules during repeated rounds of replication?
What happens to DNA molecules during repeated rounds of replication?
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Which of the following statements about telomeres is correct?
Which of the following statements about telomeres is correct?
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What is the significance of mutations in DNA?
What is the significance of mutations in DNA?
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How does DNA polymerase function in relation to the ends of linear DNA molecules?
How does DNA polymerase function in relation to the ends of linear DNA molecules?
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What type of DNA structure do most prokaryotes have?
What type of DNA structure do most prokaryotes have?
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Why is the error rate after DNA proofreading and repair described as 'not zero'?
Why is the error rate after DNA proofreading and repair described as 'not zero'?
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What can cause DNA damage aside from replication errors?
What can cause DNA damage aside from replication errors?
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Study Notes
Chapter 16: The Molecular Basis of Inheritance
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Learning Objectives:
- Understand how DNA is the genetic material of cells/organisms.
- Know the structural details of DNA.
- Understand the process of DNA replication, including the enzymes and proteins involved.
- Know the levels of chromosome structure.
Concept 16.1: DNA is the Genetic Material- How Do We Know?
- Early 20th century, identifying inheritance molecules was a challenge for biologists.
- DNA's role in heredity was first discovered by studying bacteria and viruses that infect them.
Evidence That DNA Can Transform Bacteria
- In 1928, Frederick Griffith discovered bacterial transformation.
- Griffith experimented with two bacterial strains: pathogenic (harmful) and harmless.
- Mixing heat-killed pathogenic bacteria with harmless bacteria caused some of the harmless bacteria to become pathogenic.
- This indicated a transfer of genetic material.
Evidence That DNA Can Transform Bacteria
- Oswald Avery, Maclyn McCarty, and Colin MacLeod identified DNA as the transforming substance.
- Their work showed that DNA from pathogenic bacteria could transfer genetic traits to harmless bacteria, confirming DNA's role in heredity.
- Many biologists were skeptical at first, mostly due to the limited knowledge about DNA.
Evidence That Viral DNA Can Program Cells
- More evidence from studies of viruses that infect bacteria (bacteriophages or phages).
- Viruses are DNA (or sometimes RNA) enclosed in a protein coat.
- Phages are widely used in molecular genetics research.
Evidence That Viral DNA Can Program Cells
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In 1952, Alfred Hershey and Martha Chase demonstrated that DNA, not protein, is the genetic material of a phage (bacteriophage T2).
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They designed an experiment using bacteriophages, labeling either the protein coat or the DNA with radioactive isotopes.
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Their findings proved that only the DNA entered the bacterial cell, thus transferring the genetic information.
Concept 16.2: Structure of DNA
- DNA is composed of four nucleotide pairs (A+T, C+G).
- Phosphodiester bonds link nucleotides in a single strand.
- DNA strands have polarity (5' and 3' ends).
- Antiparallel DNA strands bond together with hydrogen bonds.
DNA vs. RNA: Key Differences
Feature | DNA | RNA |
---|---|---|
Strandedness | Double-stranded | Mostly single-stranded |
Sugar | Deoxyribose | Ribose |
Bases | Thymine (T) | Uracil (U) |
Location | Nucleus | Cytosol |
Replication | Replicated | Transcribed |
Function | Stores hereditary info | Uses hereditary information to build proteins |
Figure 16.9 Base Pairing in DNA
- Purines (A & G) have double C-N rings.
- Pyrimidines (C, T, & U) have single C-N rings.
- Bases pair specifically (A with T, and C with G).
Building a Structural Model of DNA
- X-ray crystallography, using X-ray diffraction, was crucial for understanding DNA structure.
- Rosalind Franklin's X-ray diffraction images of DNA provided crucial data that enabled James Watson.
- Watson and Crick then deduced that DNA is a double helix.
Where are they now?
- Rosalind Franklin died of cancer from X-ray exposure in 1958.
- Watson, Wilkins, and Crick were awarded the Nobel Prize in 1962.
- Wilkins, and Crick died during 2000s.
Reviewing DNA Strx-Group Activity
- Group A: Nucleotide components, nitrogenous bases, differences between deoxyribose and ribose sugar, and DNA vs. RNA differences.
- Group B: DNA strand backbone molecules, phosphodiester linkages, antiparallel strands, bonds holding base pairs.
Concept 16.2: DNA Replication and Repair
- DNA replication is crucial for inheritance, ensuring faithful transmission of genetic information in cell division.
- DNA replication occurs before mitosis.
- Specific base pairing supports a possible copying mechanism.
- DNA replication is the process of copying DNA.
Figure 16.1b How Does DNA Replication Transmit Genetic Information?
- DNA replication is the process of transmitting genetic information from parent to daughter cells during mitosis (and meiosis).
- Replication begins at specific sites (origins of replication).
- Replication proceeds in both directions from each site along the DNA.
The Basic Principle: Base Pairing to a Template Strand
- Each DNA strand acts as a template during replication.
- DNA replication is semiconservative.
DNA Replication: The Mechanism
- DNA replication is rapid and accurate.
- Many enzymes and proteins are involved.
- Bacterial replication is better understood.
Getting Started
- Replication begins at origin(s) of replication, creating a replication bubble.
- Chromosomes (eukaryotic) may have many origins of replication.
- Replication progresses in both directions from each origin.
Replication Initiation
- Several proteins initiate replication.
- Helicases untwist the double helix at replication forks, separating the strands.
- Single-strand binding proteins stabilize single-stranded DNA.
- Topoisomerase relieves the strain ahead of the replication forks.
Synthesizing a New DNA Strand
- DNA polymerases synthesize new DNA strands.
- DNA polymerases require a primer.
- A short RNA primer is synthesized by primase.
Antiparallel Elongation
- DNA polymerase only adds nucleotides to the free 3' end of a growing strand.
- Leading strand is synthesized continuously.
- Lagging strand is synthesized discontinuously in Okazaki fragments.
Proofreading and Repairing DNA
- DNA polymerase can proofread and repair errors.
- Nucleotide excision repair removes and replaces damaged stretches of DNA.
Evolutionary Significance of Altered DNA Nucleotides
- Errors occur during DNA replication, but are usually corrected.
- Sequence changes (mutations) are the source of genetic variation responsible for the appearance of new species.
- Random mutations are the reason for evolution.
Replicating the Ends of DNA Molecules
- Linear DNA ends (telomeres) cannot be fully replicated by DNA polymerase.
- Telomeres shorten during each replication cycle.
- Telomerase, an enzyme, lengthens telomeres.
Concept 16.3: Chromosome Structure
- DNA is packaged into chromatin in eukaryotic cells.
- Histones, proteins, are essential for DNA packing.
- Chromatin undergoes different levels of condensation (organization) throughout the cell cycle.
- Euchromatin and heterochromatin differ in their condensation levels.
Environmental Factors
- Environmental factors like famine, toxins, or extreme stress can cause epigenetic changes that can be passed to future generations.
- Intergenerational trauma may cause epigenetic changes impacting mental health.
- Maternal nutrition during pregnancy may affect the epigenetic profile of the fetus, influencing later health.
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Test your knowledge on the crucial processes involved in DNA replication. This quiz covers various enzymes, functions, and historical experiments that highlighted the role of DNA as genetic material. Dive into the specifics of each component involved in this essential biological process.