Chemical organization and atomic structure

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Questions and Answers

Which of the following best describes the relationship between atomic number and mass number?

  • Atomic number is the number of neutrons; mass number is the sum of protons and electrons.
  • Atomic number is the number of protons; mass number is the sum of protons and neutrons. (correct)
  • Atomic number is the sum of protons and neutrons; mass number is the number of protons.
  • Atomic number is the sum of protons and electrons; mass number is the number of neutrons.

How does electronegativity affect the formation of polar covalent bonds?

  • Electronegativity leads to complete transfer of electrons, forming ionic bonds.
  • Electronegativity causes unequal sharing of electrons, resulting in a polar bond. (correct)
  • Electronegativity ensures electrons are equally shared, creating nonpolar bonds.
  • Electronegativity prevents atoms from forming bonds unless their values are identical.

What is the primary role of antioxidants in the body regarding free radicals?

  • Antioxidants increase the production of free radicals to boost cellular metabolism.
  • Antioxidants facilitate the breakdown of stable molecules into free radicals for energy.
  • Antioxidants help free radicals bond with necessary molecules.
  • Antioxidants stabilize free radicals by donating an electron, neutralizing their charge. (correct)

Which statement accurately describes the role and behavior of catalysts in chemical reactions?

<p>Catalysts lower activation energy, speeding up reactions without being altered themselves. (D)</p> Signup and view all the answers

How does water's polarity contribute to its role as a solvent?

<p>Water's polarity allows it to form hydrogen bonds with other polar molecules and ions, facilitating their dispersion. (C)</p> Signup and view all the answers

Among the unique properties of water, which is most directly responsible for moderating temperature fluctuations in living organisms and environments?

<p>Water's high heat capacity allows it to absorb or release significant heat with minimal temperature change. (C)</p> Signup and view all the answers

How does the concentration of hydrogen ions ([H+]) compare between a solution with a pH of 3 and a solution with a pH of 6?

<p>The solution with a pH of 3 has 1000 times more [H+] than the solution with a pH of 6. (B)</p> Signup and view all the answers

What is the crucial role of buffer systems in biological organisms?

<p>To maintain a constant pH by converting strong acids/bases into weak ones. (B)</p> Signup and view all the answers

How do isomers such as glucose and fructose demonstrate structural diversity despite sharing a molecular formula?

<p>Isomers have distinct arrangements of atoms, resulting in different properties. (B)</p> Signup and view all the answers

What role do carbohydrates play in the function and structure of living organisms?

<p>They serve as a long-term energy storage and form structural components. (D)</p> Signup and view all the answers

How do the dehydration synthesis and hydrolysis reactions interrelate in the context of disaccharide formation and breakdown?

<p>Dehydration synthesis combines monosaccharides into disaccharides, releasing water; hydrolysis breaks down disaccharides, consuming water. (C)</p> Signup and view all the answers

What characteristics of lipids define their role in biological systems?

<p>Their nonpolar nature makes them excellent for energy storage and forming cellular barriers. (D)</p> Signup and view all the answers

How does the structural arrangement of phospholipids enable them to form the lipid bilayer of cellular membranes?

<p>Phospholipids have both polar heads that interact with water and nonpolar tails that avoid water, forming a bilayer structure. (D)</p> Signup and view all the answers

Why is cholesterol considered a crucial steroid in animal cell membranes?

<p>It stabilizes the membrane structure by inserting itself into the lipid bilayer. (A)</p> Signup and view all the answers

In what way does the primary sequence of amino acids dictate the overall structure and function of a protein?

<p>The sequence encodes the folding and interactions which subsequently define overall protein shape and function. (B)</p> Signup and view all the answers

How does denaturation impact protein function?

<p>Disrupts the protein's three-dimensional shape, thereby inhibiting its function. (B)</p> Signup and view all the answers

How do enzymes accelerate chemical reactions in living cells?

<p>By providing a specific surface for reactants to bind, effectively lowering the activation energy. (B)</p> Signup and view all the answers

Which structural feature differentiates RNA from DNA?

<p>RNA contains ribose, and DNA contains deoxyribose sugar. (D)</p> Signup and view all the answers

What is the central function of ATP in cells?

<p>To capture and transfer energy for cellular processes. (B)</p> Signup and view all the answers

What is the relationship between exergonic and endergonic reactions and their role in metabolism?

<p>Exergonic reactions release energy, which can be used to drive endergonic reactions. (D)</p> Signup and view all the answers

Predict what would happen if a significant portion of the hydrogen bonds in a water sample were disrupted.

<p>Water's boiling point would decrease, and its ability to dissolve polar substances would be compromised. (D)</p> Signup and view all the answers

Consider a scenario where an individual's body is unable to produce sufficient antioxidants. What potential health implications could arise from this deficiency?

<p>Elevated risk of oxidative stress, cellular damage, and increased likelihood of chronic diseases. (B)</p> Signup and view all the answers

Some proteins can, under certain conditions, spontaneously refold back into their native conformation after being denatured. Which level of protein structure is most important for this refolding to occur?

<p>The protein's primary structure, which determines the sequence of amino acids. (A)</p> Signup and view all the answers

If a drug were designed to inhibit a metabolic pathway by selectively binding to an enzyme, what mechanism of action would be most effective in preventing substrate binding?

<p>Binding at the active site and preventing the substrate from occupying this space (B)</p> Signup and view all the answers

During strenuous exercise, muscle cells produce lactic acid, lowering the local pH. How would the presence of a buffer system (e.g., bicarbonate) in the muscle tissue counteract this change?

<p>By releasing hydroxide ions (OH-) to neutralize the hydrogen ions and form water (A)</p> Signup and view all the answers

What implication does the presence of numerous double bonds in the fatty acid tails of phospholipids have on membrane fluidity?

<p>It prevents close packing of lipids, enhancing cellular fluidity (B)</p> Signup and view all the answers

If given a previously unknown polysaccharide consisting of repeating glucose units linked by beta-1,4-glycosidic bonds, which of the following statements accurately describes its properties or potential functions?

<p>The polysaccharide forms rigid, structural components in plant cell walls and is resistant to digestion by mammalian enzymes. (C)</p> Signup and view all the answers

How would an increase in the ratio of unsaturated to saturated fatty acids in a cell membrane affect its structural properties and functionality?

<p>The plasma membrane is more likely to become more fluid especially at lower temperatures, improving membrane transport and signalling. (C)</p> Signup and view all the answers

Which statement correctly compares and contrasts the functions of DNA and RNA in a eukaryotic cell?

<p>DNA stores long-term genetic instructions, while RNA is involved in translating DNA's instructions into proteins. (C)</p> Signup and view all the answers

A mutation results in a protein that binds to its substrate with significantly lower affinity than normal. How is the $K_m$ (Michaelis constant) affected by this mutation?

<p>The $K_m$ is increased, indicating a lower affinity of the enzyme for the substrate. (A)</p> Signup and view all the answers

What are the potential metabolic consequences of inhibiting the enzyme ATP synthase in a cell?

<p>Reduced ability of the cell to store energy for cellular processes. (D)</p> Signup and view all the answers

During a metabolic process, a molecule of glucose is broken down in a series of steps, releasing energy that is subsequently used to synthesize ATP. Which type of reaction describes the ATP synthesis in this scenario?

<p>Endergonic reaction. (C)</p> Signup and view all the answers

How might the addition of a competitive inhibitor affect an enzyme-catalyzed reaction, and what can be done to counteract this effect?

<p>It decreases the reaction rate; add more substrate. (D)</p> Signup and view all the answers

What happens when red blood cells are placed in distilled water?

<p>The cell bursts as water moves in by osmosis since the cytoplasm is hypertonic (B)</p> Signup and view all the answers

What is the role of chaperones in protein folding and quality control within a cell?

<p>Chaperones facilitate proper protein folding; they inhibit any misfolded proteins. (C)</p> Signup and view all the answers

How do inhibitors affect the rate of a chemical reaction?

<p>By slowing down or preventing the chemical reaction. (B)</p> Signup and view all the answers

What distinguishes ionic compounds from covalent compounds in terms of reaction speed?

<p>Ionic compounds react faster due to easier separation of ions. (D)</p> Signup and view all the answers

How does increasing the pressure of a gas influence the rate of a chemical reaction?

<p>It increases the concentration of gas molecules. (D)</p> Signup and view all the answers

Which characteristic of powdered solid reactants enhances their reaction rate compared to large chunks of the same substance?

<p>Greater surface area. (A)</p> Signup and view all the answers

How does temperature primarily affect the rate of a chemical reaction?

<p>By increasing the frequency and energy of molecular collisions. (B)</p> Signup and view all the answers

Which statement accurately describes the role of a catalyst in a chemical reaction?

<p>Catalysts lower the activation energy of the reaction. (D)</p> Signup and view all the answers

How does the concentration of reactants influence the rate of a chemical reaction?

<p>Higher concentration generally leads to a faster reaction. (A)</p> Signup and view all the answers

What term describes a chemical species with an unpaired electron in its outermost shell, making it highly reactive?

<p>Free radical. (D)</p> Signup and view all the answers

What distinguishes intermolecular forces from intramolecular forces?

<p>Intermolecular forces occur between molecules, while intramolecular forces occur within a molecule. (D)</p> Signup and view all the answers

An atom that has gained an electron is called what?

<p>An anion, and it has a negative charge. (B)</p> Signup and view all the answers

What is a key characteristic of hydrogen bonds, and how do they differ from typical covalent bonds?

<p>Hydrogen bonds are weak intermolecular bonds that do not involve electron transfer. (D)</p> Signup and view all the answers

How do synthesis reactions contribute to metabolism, and what type of reaction are they?

<p>They build complex molecules and are anabolic and endergonic. (A)</p> Signup and view all the answers

What best describes an exergonic reaction?

<p>A reaction that releases energy into the surroundings. (D)</p> Signup and view all the answers

In the context of polysaccharides, which of the following is primarily used for structural support in plant cell walls?

<p>Cellulose. (A)</p> Signup and view all the answers

Which of the followings is correct about the monosaccharide, Disaccharides, Oligosaccharides, and Polysaccharides?

<p>Monosaccharides are building block of Disaccharides. (C)</p> Signup and view all the answers

Which polysaccharide is used by animals to store energy mainly in the liver and muscles?

<p>Glycogen (C)</p> Signup and view all the answers

How does the D-configuration of glucose affect the position of the hydroxyl group (-OH) on carbon-2?

<p>It causes the hydroxyl group to be on the right side. (B)</p> Signup and view all the answers

Concerning the concept of epimers, what specific structural difference defines mannose as a C-2 epimer of glucose?

<p>Difference in the configuration of the hydroxyl group (-OH) on carbon-2. (B)</p> Signup and view all the answers

Which of the following best describes the primary role of carbohydrates in living organisms?

<p>Immediate source of energy. (D)</p> Signup and view all the answers

Considering the element composition of biomolecules, what elements are characteristically present in carbohydrates?

<p>Carbon, Hydrogen, Oxygen. (D)</p> Signup and view all the answers

Which reaction is correctly matched with its metabolic process?

<p>Decomposition : Cortabolic, Exergonic (C)</p> Signup and view all the answers

Which of the following describes the key chemical difference between metals and nonmetals?

<p>Metals transfer electrons to form bonds; nonmetals share them (C)</p> Signup and view all the answers

How does the presence of double or triple bonds affect the nature of covalent bonds?

<p>Single bonds are weaker and more flexible than double or triple bonds. (D)</p> Signup and view all the answers

If a substance emits a silver or dirty white color when subjected to a flame test, what type of compound is likely present?

<p>A metallic compound. (C)</p> Signup and view all the answers

If an element tends to readily gain electrons, which of the following properties would you expect it to exhibit?

<p>High electronegativity. (D)</p> Signup and view all the answers

How are metalloids different from metals and nonmetals in terms of electrical conductivity?

<p>Metalloids have intermediate conductivity, acting as semiconductors. (D)</p> Signup and view all the answers

An electrically charged atom or group of atoms is called what?

<p>Ion (B)</p> Signup and view all the answers

Which statement correctly describes the 'octet rule' in the context of chemical bonding?

<p>Atoms gain, lose, or share electrons to achieve a full outer shell of eight electrons. (B)</p> Signup and view all the answers

What is the relationship between potential energy and kinetic energy?

<p>Potential energy is stored energy, while kinetic energy is energy in motion. (A)</p> Signup and view all the answers

Which component is found in proteins but not in carbohydrates?

<p>Nitrogen (B)</p> Signup and view all the answers

How does increasing the surface area of solid reactants typically affect the reaction rate?

<p>Increases the rate by providing more area for collisions. (B)</p> Signup and view all the answers

Which is the most accurate description of metabolism?

<p>The subtotal of all chemical reactions in a body. (A)</p> Signup and view all the answers

What defines activation energy in a chemical reaction?

<p>The energy required for reactants to start a reaction. (D)</p> Signup and view all the answers

What makes free radicals particularly dangerous in biological systems?

<p>Their unpaired electron makes them highly reactive and damaging. (A)</p> Signup and view all the answers

Which of the following best defines the term 'ion'?

<p>An atom or molecule that has gained or lost electrons, giving it an electrical charge. (A)</p> Signup and view all the answers

Based upon its role in metabolism, What outcome would be expected from significantly decreasing one's carbohydrate consumption.

<p>The body begin using protein and Lipase for energy. (D)</p> Signup and view all the answers

A chemical reaction proceeds spontaneously and releases energy. Which of the following terms best describes this type of reaction?

<p>Exergonic (D)</p> Signup and view all the answers

If a scientist aims to synthesize a novel hexose that is neither glucose, fructose, nor galactose, what alteration at a single carbon center would most effectively ensure it is a unique isomer?

<p>Reversing the stereochemistry at a chiral carbon, other than C-2 or C-4. (A)</p> Signup and view all the answers

Considering that galactose is a C-4 epimer of glucose, how would an enzymatic defect that impairs the conversion of galactose to glucose most likely manifest at the cellular level?

<p>Accumulation of galactose or its metabolites, potentially leading to cellular toxicity and osmotic imbalances. (D)</p> Signup and view all the answers

Given that triglycerides are composed of glycerol and three fatty acids, and phospholipids are composed of glycerol, two fatty acids, and a phosphate group, what biophysical consequence would result from replacing triglycerides with phospholipids as the primary storage lipid in adipocytes?

<p>Greater amphipathicity, leading to the formation of micelles and destabilization of lipid droplets in the cytoplasm. (D)</p> Signup and view all the answers

Imagine a scenario where a cell is engineered to produce a novel enzyme that catalyzes the formation of a unique disaccharide composed of two non-naturally occurring monosaccharides. What cellular machinery would be essential for the proper glycosidic bond formation and quality control of this novel disaccharide?

<p>The Golgi apparatus and endoplasmic reticulum, for glycosylation and folding of the disaccharide synthase enzyme. (C)</p> Signup and view all the answers

If a new drug is designed to competitively inhibit the enzyme lactase, which normally breaks down lactose, what strategy would be most effective in minimizing the effects of this drug in individuals with lactose intolerance?

<p>Supplementing with a high concentration of a substrate analog that resembles lactose but has a lower binding affinity for lactase than lactose itself. (B)</p> Signup and view all the answers

Predict the most significant consequence of a genetic mutation that causes a substitution of a hydrophobic amino acid for a hydrophilic amino acid in the active site of an enzyme.

<p>Disruption of substrate binding and catalysis due to altered interactions with the substrate. (B)</p> Signup and view all the answers

If a researcher introduces a mutation into a gene encoding an enzyme, resulting in a significantly increased $K_m$ value, what is the most likely consequence for the enzyme's activity in vivo under normal physiological conditions?

<p>The enzyme's reaction rate will decrease, especially when substrate concentrations are low. (D)</p> Signup and view all the answers

If a scientist successfully develops a drug that selectively disrupts the hydrogen bonds between amino acids in a protein, which level of protein structure would be most immediately affected?

<p>Secondary structure, resulting in disruption of alpha-helices and beta-sheets. (C)</p> Signup and view all the answers

Considering that proteins are composed of amino acids linked by peptide bonds, how does the unique sequence of these amino acids ultimately dictate the three-dimensional structure and biological activity of the protein?

<p>The amino acid sequence dictates the folding pattern that maximizes hydrophobic interactions and minimizes steric clashes. (A)</p> Signup and view all the answers

How would a significant increase in the proportion of unsaturated fatty acids within phospholipid molecules affect the structure and function of a biological membrane?

<p>Increase membrane fluidity by disrupting the regular packing of phospholipid tails. (A)</p> Signup and view all the answers

Under what physiological circumstances might a cell preferentially synthesize triglycerides over phospholipids, even if both can be synthesized from the same precursors?

<p>During periods of excess caloric intake, when energy storage is favored over membrane maintenance. (A)</p> Signup and view all the answers

What is the predicted outcome if a mutation impairs the cell's ability to synthesize branched-chain amino acids?

<p>Reduced synthesis of specific proteins that require branched-chain amino acids, potentially affecting various cellular functions. (A)</p> Signup and view all the answers

How would a drug that selectively inhibits the enzyme responsible for forming peptide bonds affect cellular processes?

<p>Inhibition of protein synthesis, leading to a build-up of free amino acids and a decrease in protein production. (C)</p> Signup and view all the answers

If a mutation in a gene results in a protein that is significantly shorter than its normal length due to an early stop codon, but still retains some of its original functional domains, how might this affect the protein's interactions within a multi-protein complex?

<p>The truncated protein may fail to properly assemble into the complex, leading to instability or loss of function. (D)</p> Signup and view all the answers

How does the presence of both hydrophobic and hydrophilic regions in a phospholipid molecule contribute to the unique properties of biological membranes?

<p>It enables phospholipids to self-assemble into a bilayer structure, with hydrophobic tails facing inward and hydrophilic heads facing outward, creating a barrier to polar molecules. (B)</p> Signup and view all the answers

If a scientist discovers a new organism whose cell membranes contain a high proportion of lipids with branched isoprene chains instead of fatty acids, how might this adaptation affect the organism's survival in extreme environments?

<p>The branched isoprene chains would enhance membrane stability at high temperatures by forming more stable hydrophobic interactions. (C)</p> Signup and view all the answers

How do metalloids differ in their chemical bonding behavior compared to non-metals, especially in the context of forming complex networks or alloys?

<p>Metalloids can form both covalent and metallic bonds, allowing them to act as semiconductors and create alloys, while nonmetals primarily form covalent bonds. (C)</p> Signup and view all the answers

In the context of metabolic pathways, how would inhibiting a key enzyme in glycolysis, such as phosphofructokinase (PFK), impact the downstream processes of the citric acid cycle and oxidative phosphorylation if the cell cannot import alternative fuels?

<p>It would result in decreased ATP production due to a reduction in pyruvate supply, slowing down both the citric acid cycle and oxidative phosphorylation. (A)</p> Signup and view all the answers

If a mutation prevents a cell from properly synthesizing disaccharides from available monosaccharides, how would this deficiency impact the cell's ability to store and mobilize energy reserves effectively?

<p>The cell would be unable to form polysaccharides, limiting its capacity to store large amounts of glucose for later use. (B)</p> Signup and view all the answers

How would introducing a non-competitive inhibitor that binds to an allosteric site on an enzyme influence the enzyme's catalytic efficiency, specifically in terms of $V_{max}$ and $K_m$?

<p>$V_{max}$ decreases, and $K_m$ remains unchanged, reducing the enzyme's maximum reaction rate but not its affinity for the substrate. (C)</p> Signup and view all the answers

What property, essential for life processes, is predominantly due to water's capacity to form hydrogen bonds?

<p>Water's high heat of vaporization, making it an effective coolant. (C)</p> Signup and view all the answers

If a researcher designs a synthetic molecule that mimics the structure of a monosaccharide but contains a non-hydrolyzable bond linking the sugar units, what potential applications might this molecule have in biological systems?

<p>As a competitive inhibitor of glycosidases, modulating carbohydrate metabolism. (D)</p> Signup and view all the answers

Suppose a cell needs to rapidly increase its production of a specific protein. How would it coordinate the processes of transcription, translation, and amino acid availability to achieve this goal efficiently?

<p>Increase transcription, translation, and amino acid import to ensure a sufficient supply of building blocks. (B)</p> Signup and view all the answers

What would be the most immediate consequence if a cell were treated with a drug that selectively inhibits the enzyme that adds phosphate groups to proteins?

<p>Decreased activity of proteins that are normally activated by phosphorylation. (B)</p> Signup and view all the answers

If a scientist discovers a new enzyme that catalyzes the formation of an unusual covalent bond not typically found in biological systems, what experimental approach could best determine the enzyme's precise mechanism of action and substrate specificity?

<p>Using X-ray crystallography to determine the enzyme's three-dimensional structure in complex with its substrate and any necessary cofactors. (B)</p> Signup and view all the answers

How does the arrangement of amino acids with hydrophobic side chains contribute to protein folding and stability in an aqueous cellular environment?

<p>They tend to cluster together in the protein's interior, minimizing their contact with water and increasing the protein's overall stability. (B)</p> Signup and view all the answers

If a cell is exposed to a toxin that disrupts the formation of disulfide bonds in proteins, how would this affect the proteins' structural integrity and function?

<p>The proteins would lose their tertiary and quaternary structure, potentially leading to loss of function. (B)</p> Signup and view all the answers

Predict the most significant metabolic change that would occur in a liver cell if it were genetically modified to overexpress the enzyme glycogen synthase, which catalyzes the addition of glucose monomers to glycogen.

<p>Enhanced glucose uptake from the bloodstream and increased glycogen storage. (A)</p> Signup and view all the answers

If a drug selectively inhibits the enzyme involved in the rate-limiting (slowest) step of a metabolic pathway, how would this affect the flux (rate of flow) through the entire pathway and the concentrations of the pathway's intermediates?

<p>The flux through the pathway would decrease, and the concentrations of intermediates before the inhibited step would increase, while those after the inhibited step would decrease. (D)</p> Signup and view all the answers

How are the nonmetals organized on the periodic table, and what is their general tendency regarding electron affinity?

<p>They are generally found on the right side of the periodic table and have a high electron affinity, readily gaining electrons to form negative ions. (D)</p> Signup and view all the answers

What is the relationship between free radicals and antioxidants regarding their roles in cellular damage and protection?

<p>Free radicals are unstable molecules that can damage cells, while antioxidants are compounds that neutralize free radicals, protecting cells from damage. (B)</p> Signup and view all the answers

What is the predicted effect on the secondary structure of a protein if all proline residues are mutated to alanine?

<p>Alpha-helices would become less stable due to the loss of proline's rigid ring structure. (C)</p> Signup and view all the answers

How does the arrangement of electrons in the outermost shell influence the chemical behavior of an atom, and what role does this arrangement play in the formation of chemical bonds?

<p>Atoms tend to gain, lose, or share electrons to achieve a stable electron configuration in their outermost shell, leading to the formation of chemical bonds. (D)</p> Signup and view all the answers

If the lactase enzyme were modified such that it could no longer undergo induced fit upon substrate binding, how would this affect its catalytic efficiency?

<p>The enzyme's $V_{max}$ would decrease because the enzyme would not be able to optimally position the substrate for catalysis. (C)</p> Signup and view all the answers

What is the role of cellular chaperones in ensuring that proteins achieve their correct three-dimensional structure and avoid misfolding, aggregation, or degradation?

<p>Chaperones provide a protective environment where proteins can fold correctly, preventing aggregation and targeting misfolded proteins for degradation. (D)</p> Signup and view all the answers

If an alien organism is discovered whose genetic material utilizes a different set of nucleotide bases distinct from adenine, guanine, cytosine, and thymine/uracil, what fundamental principles of molecular recognition and genetic information storage and transfer would still likely apply?

<p>The sequence of nucleotide bases would still encode genetic information, and complementary base pairing would likely be used for replication and transcription. (A)</p> Signup and view all the answers

Predict one major consequence of a widespread deficiency in essential fatty acids on a population's overall health.

<p>Impaired brain development and cognitive function, as well as compromised cell membrane structure and function. (B)</p> Signup and view all the answers

How does the diversity of the 20 different amino acids contribute to the vast array of protein structures and functions observed in living organisms?

<p>The differing size, shape, charge, hydrophobicity, and chemical reactivity drives the final three-dimensional folding of polypeptide chains, leading to the creation of active sites, binding pockets. (D)</p> Signup and view all the answers

Flashcards

Chemical Elements

Substances that cannot be split into simpler substances by ordinary chemical means.

Atoms

Units of matter of all chemical elements. An element is a quantity of matter composed of atoms of the same type.

Atomic Number

Number of protons in the nucleus of an atom.

Mass Number

The sum of its protons and neutrons in the nucleus.

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Ion

An atom that gave up or gained an electron

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Molecules

Atoms share electrons

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Free Radical

An electrically charged atom or group of atoms with an unpaired electron in its outermost shell.

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Chemical Bonds

The atoms of a molecule are held together by forces of attraction.

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Ionic Bonds

Formed when an atom loses or gains a valence electron, forming ions.

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Covalent Bonds

Formed by the atoms of molecules sharing one, two, or three pairs of their valence electrons.

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Polar Covalent Bonds

Unequal sharing of electrons between atoms.

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Hydrogen Bonds

Weak intermolecular bonds; they serve as links between molecules.

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Chemical Reactions

New bonds form and/or old bonds are broken.

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Metabolism

The sum of all the chemical reactions in the body.

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Energy

Energy is the capacity to do work.

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Kinetic Energy

Energy is associated with matter in motion

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Potential Energy

Energy is stored by matter due to its position.

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Exergonic Reaction

A reaction in which the bond being broken has more energy than the one formed so that extra energy is released.

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Endergonic Reaction

A reaction requires that energy be added to form a bond.

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Catalysts

Chemical compounds that speed up chemical reactions by lowering the activation energy needed for a reaction to occur.

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Types of Chemical Reactions

Synthesis reactions -- Anabolism

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Inorganic compounds

Inorganic compounds usually lack carbon and are simple molecules; whereas organic compounds always contain carbon and hydrogen.

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Water

Has polarity, the uneven sharing of valence electrons

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Hydrophilic

Substances which contain polar covalent bonds and dissolve in water.

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Hydrophobic

Substances which contain non polar covalent bonds

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Water is essential for health

Water's role as a solvent makes it essential for health and survival.

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Solutions

A substance called the solvent dissolves another substance called the solute.

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Colloid

A substance that differs from a solution mainly on the basis of the size of its particles with the particles in the colloid being large enough to scatter light.

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Suspension

The suspended material may mix with the liquid or suspending medium for some time, but it will eventually settle out.

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Concentration of a molecule

The concentration of a molecule is a way of stating the amount of that molecule dissolved in solution.

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pH scale

Scale runs from 0 to 14 (concentration of H+ in moles/liter)

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pH: Buffer systems

The pH values of different parts of the body are maintained fairly constant by buffer systems, which usually consist of a weak acid and a weak base.

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Carbohydrates

Includes sugars, starches, glycogen, and cellulose.

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Triglycerides

The most plentiful lipids in the body and provide protection, insulation, and energy (both immediate and stored).

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Phospholipids

Are important membrane components and are amphipathic, with both polar and nonpolar regions.

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Steroids

Has four rings of carbon atoms and including sex hormone, bile salts some vitamins, cholesterol.

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Proteins

Constructed from combinations of 20 amino acids, and chains formed from 10 to 2000 amino acids

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Enzymes

Catalysts in living cells.

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Nucleic acids

Acids are huge organic molecules that contain carbon, hydrogen, oxygen, nitrogen, and phosphorus.

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Deoxyribonucleic acid (DNA)

Forms the genetic code inside each cell and thereby regulates most of the activities that take place in our cells throughout a lifetime.

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Chemical Bond Types

Ionic, covalent, or hydrogen.

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Synthesis Reaction

Reactants A and B combine to forms AB.

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Decomposition Reaction

AB breaks down into A + B.

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Exchange Reaction

A + BC becomes AC + B.

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Reversible Reaction

A + B yields C and D can proceed in both directions.

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Factors Affecting Reactions

Concentration, Temperature and Catalysts.

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CHO

Carbon, Hydrogen, and Oxygen.

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Types of Carbohydrates

Monosaccharides, Disaccharides, Oligosaccharides, Polysaccharides.

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Glucose's Role

Glucose is a primary energy source for cells.

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Disaccharides

Form from 2 monosaccharides bonded via dehydration.

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Oligosaccharides

Carbohydrates of 3-10 monosaccharide units.

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Polysaccharides

Many monosaccharide units for energy storage or structure.

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Mannose as C-2 Epimer

Mannose differs only in the -OH group config. at carbon 2.

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Epimer Definition

Identical except for -OH group config. at carbon 2.

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D-Glucose Configuration

Glucose has -OH on the right at carbon-2 in D-config..

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Hydrogen Bonding

Type of covalent bond; no transfer of electrons.

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Carbohydrate Types

Carbohydrates classified by carbon number (3, 4, 5, or 6).

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Types of Hexoses

Glucose, fructose, and galactose.

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Lactase

An enzyme that metabolizes lactose.

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Monosaccharides

Building blocks of carbohydrates; includes glucose, fructose, galactose

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Lipid Building Blocks

Glycerol and fatty acids.

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Phospholipids composition

Two fatty acids, glycerol, and a phosphate group.

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Amino Acids

Building blocks of proteins.

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Disaccharides and Polysaccharides

Form when monosaccharides combine

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General formula of aldehyde

The general formula of aldehyde which contains a carbonyl group bonded to at least one hydrogen atom.

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Galactose

The C-4 epimer of glucose

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Study Notes

  • The chemical level of organization is the basic unit of matter

Factors Affecting Chemical Reactions:

  • Concentration of Reactants: Higher concentrations generally lead to a faster reaction due to more frequent collisions.
  • Temperature: Increased temperature usually increases reaction rate by increasing molecular speed and collision frequency.
  • Surface Area of Reactants: Greater surface area allows for more collisions, increasing reaction speed, powdered reactants react faster than large chunks.
  • Catalysts speed up reactions without being consumed by lowering activation energy.
  • Pressure (for gases): Increasing pressure increases gas concentration, speeding up reactions.
  • Nature of Reactants: Some substances react more easily than others due to their chemical properties; ionic compounds react faster than covalent ones.
  • Presence of Inhibitors: Inhibitors slow down or prevent chemical reactions and are opposite of catalysts.

Atomic Structure

  • Nucleus contains protons and neutrons.
  • Electrons surround the nucleus.
  • Atoms follow the electron shell model.

Ions

  • Ions are atoms with a charge (+ or -).
  • Cations are positively charged.
  • Anions are negatively charged.

Octet Rule

  • Atoms share electrons to complete 8 electrons.
  • Free radicals are electrically charged atoms or groups with an unpaired electron, which are unstable and highly reactive.

Intermolecular vs Intramolecular Forces

  • Intermolecular forces are between molecules, like Van der Waals and dipole-dipole interactions.
  • Intramolecular forces are within a molecule, between elements, such as covalent and ionic bonds.

Types of Chemical Formula

  • General chemical formula for reactions: A + B -> C.
  • Synthesis (Anabolic/Endergonic): A + B -> AB.
  • Decomposition (Cortabolic/Exergonic): AB -> A + B
  • Exchange: A + BC -> A + B + C
  • Reversible: AB + CD <-> AD + BC

Carbohydrates

  • Also known as sugars.
  • Composed of carbon, hydrogen, and oxygen.
  • Carbohydrates are the first biomolecule source of energy.
  • 1g Carbohydrates/Proteins/Lipse = 4kcal
  • 1g Lipids = 9kcal
  • 1g Alcohol = 7kcal
  • Includes monosaccharides, disaccharides, oligosaccharides, and polysaccharides.
  • The building blocks are monosaccharides (simple sugars) like glucose, fructose, and galactose.
  • Monosaccharides can combine to form disaccharides like sucrose and lactose or polysaccharides like starch, glycogen, and cellulose.

Saccharides

  • Monosaccharides are the simplest form of carbohydrates.
  • Disaccharides form when two monosaccharides bond together through dehydration synthesis.
  • Oligosaccharides contain 3-10 monosaccharide units, often signal or are part of cell recognition.
  • Polysaccharides are large, complex carbohydrates for long-term energy storage or structural support.

Mannose vs Glucose

  • Mannose is a C-2 epimer of glucose, differing only in the configuration of the hydroxyl group (-OH) on carbon 2.
  • Glucose has a hydroxyl group (-OH) on the right side of carbon-2 in its D-configuration.
  • Mannose has a hydroxyl group on the left side of carbon-2.

Additional Information

  • Metalloids include Boron (B), Silicon (Si), Germanium (Ge), Arsenic (As), Antimony (Sb), and Tellurium (Te).
  • Nonmetals include Hydrogen (H), Helium (He), Carbon (C), Nitrogen (N), Oxygen (O), Fluorine (F), Neon (Ne), Phosphorus (P), Sulfur (S), Chlorine (Cl), Argon (Ar), Selenium (Se), Bromine (Br), Krypton (Kr), Iodine (I), Xenon (Xe), Astatine (At), and Radon (Rn).
  • Carbohydrates can be classified based on the number of carbon atoms:
    • C3-triose: 3 carbon atoms
    • C4-tetrose: 4 carbon atoms
    • C5-pentose: 5 carbon atoms
    • C6-hexose: 6 carbon atoms
  • Hexoses include glucose, fructose (ketone and fruit sugar), and galactose, all with the formula C6H12O6, differing only in chemical structure.
  • Glucose is a blood/physiologic sugar.
  • The general formula of an aldehyde is R-CHO.
  • Galactose is a C-4 epimer of glucose.
  • Lactase is an enzyme that metabolizes lactose.
  • The building blocks of proteins are amino acids, with 20 different types that can combine to form proteins.
  • The sequence and structure of amino acids determine the function of the protein.
  • The building blocks of lipids are primarily fatty acids and glycerol.
  • Triglycerides consist of three fatty acids bonded to one molecule of glycerol.
  • Phospholipids consist of two fatty acids, glycerol, and a phosphate group.

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