Podcast
Questions and Answers
What is the role of p21 in response to DNA damage?
What is the role of p21 in response to DNA damage?
What is the result of phosphorylation of p53 by ATM/ATR?
What is the result of phosphorylation of p53 by ATM/ATR?
What is the role of CHK1 and CHK2 in response to DNA damage?
What is the role of CHK1 and CHK2 in response to DNA damage?
What is the consequence of not repairing DNA damage before progressing to the next stage of the cell cycle?
What is the consequence of not repairing DNA damage before progressing to the next stage of the cell cycle?
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What is the role of 14-3-3α in regulating the cell cycle?
What is the role of 14-3-3α in regulating the cell cycle?
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What is the role of p53 in ensuring DNA integrity?
What is the role of p53 in ensuring DNA integrity?
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What is the consequence of ATM/ATR screening the genome for single-strand breaks?
What is the consequence of ATM/ATR screening the genome for single-strand breaks?
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What is the G2/M checkpoint responsible for?
What is the G2/M checkpoint responsible for?
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What is the primary function of the G1 phase in the cell cycle?
What is the primary function of the G1 phase in the cell cycle?
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What is the role of the G0 phase in the cell cycle?
What is the role of the G0 phase in the cell cycle?
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What is the primary function of cyclins in the cell cycle?
What is the primary function of cyclins in the cell cycle?
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What is the purpose of the G1/S checkpoint in the cell cycle?
What is the purpose of the G1/S checkpoint in the cell cycle?
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What protein serves as a quality assurance checkpoint for cells wanting to progress from G1 to S phase?
What protein serves as a quality assurance checkpoint for cells wanting to progress from G1 to S phase?
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What is the purpose of the G2/M checkpoint in the cell cycle?
What is the purpose of the G2/M checkpoint in the cell cycle?
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What is the result of DNA damage detection at the G1/S checkpoint?
What is the result of DNA damage detection at the G1/S checkpoint?
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What is the role of ATM in the cell cycle?
What is the role of ATM in the cell cycle?
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What is the primary characteristic of steroid signalling molecules that allows them to interact with receptors?
What is the primary characteristic of steroid signalling molecules that allows them to interact with receptors?
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What occurs as a result of ligand binding to receptors in cell signalling?
What occurs as a result of ligand binding to receptors in cell signalling?
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What is the purpose of transcriptional regulatory elements in cell signalling?
What is the purpose of transcriptional regulatory elements in cell signalling?
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What is the term for the region of a receptor that forms temporary non-covalent bonds with a signalling molecule?
What is the term for the region of a receptor that forms temporary non-covalent bonds with a signalling molecule?
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What is the final stage of cell signalling?
What is the final stage of cell signalling?
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What is the function of receptors in cell signalling?
What is the function of receptors in cell signalling?
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What determines the rate of response in cell signalling?
What determines the rate of response in cell signalling?
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What is the intermediate step between signal reception and cellular response in cell signalling?
What is the intermediate step between signal reception and cellular response in cell signalling?
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What is the main function of secondary messenger molecules in cell signalling?
What is the main function of secondary messenger molecules in cell signalling?
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What is the purpose of incorporating multiple branching pathways in cell signalling?
What is the purpose of incorporating multiple branching pathways in cell signalling?
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What is the role of phosphorylation in cell signalling?
What is the role of phosphorylation in cell signalling?
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What is the function of cyclic AMP (cAMP) in cell signalling?
What is the function of cyclic AMP (cAMP) in cell signalling?
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What is the role of inositol triphosphate in cell signalling?
What is the role of inositol triphosphate in cell signalling?
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What is the purpose of circulating the ligand at low levels in cell signalling?
What is the purpose of circulating the ligand at low levels in cell signalling?
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What is the result of incorporating multiple branching pathways in cell signalling?
What is the result of incorporating multiple branching pathways in cell signalling?
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What is the role of calcium in cell signalling?
What is the role of calcium in cell signalling?
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In the cell signalling pathway, what is the final stage where the signal reaches the response elements?
In the cell signalling pathway, what is the final stage where the signal reaches the response elements?
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What is the function of nuclear receptors in the cellular response?
What is the function of nuclear receptors in the cellular response?
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What is the common structure of nuclear receptors?
What is the common structure of nuclear receptors?
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How many types of nuclear receptors are there?
How many types of nuclear receptors are there?
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What is the result of ligand binding in the cytosol for Type 1 nuclear receptors?
What is the result of ligand binding in the cytosol for Type 1 nuclear receptors?
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Where do steroids and nitric oxide bind with intracellular receptor proteins?
Where do steroids and nitric oxide bind with intracellular receptor proteins?
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What is the function of the conserved DNA binding domain in nuclear receptors?
What is the function of the conserved DNA binding domain in nuclear receptors?
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How many nuclear receptors are present in the human genome?
How many nuclear receptors are present in the human genome?
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What is the primary function of the G1 phase in the cell cycle, and how does it relate to DNA synthesis?
What is the primary function of the G1 phase in the cell cycle, and how does it relate to DNA synthesis?
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Explain the role of cyclins in the cell cycle, and how they regulate cell cycle progression.
Explain the role of cyclins in the cell cycle, and how they regulate cell cycle progression.
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Describe the role of the G1/S checkpoint in maintaining genome integrity, and how it responds to DNA damage.
Describe the role of the G1/S checkpoint in maintaining genome integrity, and how it responds to DNA damage.
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What is the function of p53 in the cell cycle, and how does it interact with other proteins to regulate cell growth?
What is the function of p53 in the cell cycle, and how does it interact with other proteins to regulate cell growth?
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Explain the purpose of the G2/M checkpoint, and how it differs from the G1/S checkpoint.
Explain the purpose of the G2/M checkpoint, and how it differs from the G1/S checkpoint.
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What is the role of ATM in the cell cycle, and how does it interact with other proteins to regulate cell growth?
What is the role of ATM in the cell cycle, and how does it interact with other proteins to regulate cell growth?
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Describe the differences between the G0 phase and the G1 phase of the cell cycle.
Describe the differences between the G0 phase and the G1 phase of the cell cycle.
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Explain the concept of cell cycle checkpoints, and how they regulate cell cycle progression.
Explain the concept of cell cycle checkpoints, and how they regulate cell cycle progression.
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How does p53 ensure DNA integrity during the G2/M checkpoint, and what is the consequence of not detecting DNA damage?
How does p53 ensure DNA integrity during the G2/M checkpoint, and what is the consequence of not detecting DNA damage?
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What is the significance of ATM/ATR screening the genome for single-strand breaks, and how does it impact p53 phosphorylation?
What is the significance of ATM/ATR screening the genome for single-strand breaks, and how does it impact p53 phosphorylation?
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What is the role of 14-3-3α in regulating the cell cycle, and how does it interact with CDK1?
What is the role of 14-3-3α in regulating the cell cycle, and how does it interact with CDK1?
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How does the G2/M checkpoint prevent the progression of damaged DNA to the next stage of the cell cycle?
How does the G2/M checkpoint prevent the progression of damaged DNA to the next stage of the cell cycle?
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What is the consequence of p53 phosphorylation by ATM/ATR, and how does it impact downstream targets?
What is the consequence of p53 phosphorylation by ATM/ATR, and how does it impact downstream targets?
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How does the CHK1 and CHK2 phosphorylation cascade contribute to cell cycle arrest in response to DNA damage?
How does the CHK1 and CHK2 phosphorylation cascade contribute to cell cycle arrest in response to DNA damage?
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What is the role of p21 in response to DNA damage, and how does it interact with other checkpoint proteins?
What is the role of p21 in response to DNA damage, and how does it interact with other checkpoint proteins?
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How does the G1/S checkpoint prevent the progression of damaged DNA to the S phase, and what are the consequences of not detecting DNA damage?
How does the G1/S checkpoint prevent the progression of damaged DNA to the S phase, and what are the consequences of not detecting DNA damage?
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What is the significance of the hydrophobic property of steroid signalling molecules in cell signalling?
What is the significance of the hydrophobic property of steroid signalling molecules in cell signalling?
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How do ligand-receptor binding complexes typically result in receptor activation?
How do ligand-receptor binding complexes typically result in receptor activation?
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What is the role of ligand binding domains (LBDs) in receptors?
What is the role of ligand binding domains (LBDs) in receptors?
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What determines the rate of response in cell signalling in response to external stimuli?
What determines the rate of response in cell signalling in response to external stimuli?
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What is the intermediate step between signal reception and cellular response in cell signalling?
What is the intermediate step between signal reception and cellular response in cell signalling?
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How do changes in gene expression occur in response to cell signalling?
How do changes in gene expression occur in response to cell signalling?
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What is the purpose of receptors in cell signalling?
What is the purpose of receptors in cell signalling?
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What is the significance of the interaction between ligand and receptor in cell signalling?
What is the significance of the interaction between ligand and receptor in cell signalling?
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What is the primary mechanism by which cells control the activation of certain signalling pathways, and what is the significance of this mechanism?
What is the primary mechanism by which cells control the activation of certain signalling pathways, and what is the significance of this mechanism?
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What is the purpose of incorporating multiple branching pathways in cell signalling, and what is the consequence of this incorporation?
What is the purpose of incorporating multiple branching pathways in cell signalling, and what is the consequence of this incorporation?
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What is the role of secondary messenger molecules in cell signalling, and provide examples of these molecules?
What is the role of secondary messenger molecules in cell signalling, and provide examples of these molecules?
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What is the purpose of circulating the ligand at low levels in cell signalling, and what would be the consequence of not doing so?
What is the purpose of circulating the ligand at low levels in cell signalling, and what would be the consequence of not doing so?
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What is the role of phosphorylation in cell signalling, and what is the significance of this modification?
What is the role of phosphorylation in cell signalling, and what is the significance of this modification?
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How do proteins within the signalling pathway transmit the signal further down the chain, and what is the significance of this transmission?
How do proteins within the signalling pathway transmit the signal further down the chain, and what is the significance of this transmission?
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What is the significance of the step-by-step process within the cytoplasmic domain, and how does it relate to signal transduction?
What is the significance of the step-by-step process within the cytoplasmic domain, and how does it relate to signal transduction?
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What is the role of inositol triphosphate in cell signalling, and how does it relate to other secondary messenger molecules?
What is the role of inositol triphosphate in cell signalling, and how does it relate to other secondary messenger molecules?
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What is the significance of the binding of steroids and nitric oxide with intracellular receptor proteins in the cytosol or nucleus?
What is the significance of the binding of steroids and nitric oxide with intracellular receptor proteins in the cytosol or nucleus?
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What is the role of nuclear receptors in the cellular response, and how do they regulate transcription?
What is the role of nuclear receptors in the cellular response, and how do they regulate transcription?
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Describe the structure and function of Type 1 nuclear receptors, including the role of heat shock proteins.
Describe the structure and function of Type 1 nuclear receptors, including the role of heat shock proteins.
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What is the final stage of cell signalling, and how does it relate to the cellular response?
What is the final stage of cell signalling, and how does it relate to the cellular response?
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What is the significance of ligand binding in the cytosol for Type 1 nuclear receptors, and how does it relate to the regulation of gene expression?
What is the significance of ligand binding in the cytosol for Type 1 nuclear receptors, and how does it relate to the regulation of gene expression?
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Describe the role of nuclear receptors in regulating transcription, including their structure and function.
Describe the role of nuclear receptors in regulating transcription, including their structure and function.
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What is the significance of the binding of steroids and nitric oxide with intracellular receptor proteins in the cytosol or nucleus, and how does it relate to the cellular response?
What is the significance of the binding of steroids and nitric oxide with intracellular receptor proteins in the cytosol or nucleus, and how does it relate to the cellular response?
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What type of receptor is the Acetylcholine (Ach) ligand gated channel?
What type of receptor is the Acetylcholine (Ach) ligand gated channel?
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What is the result of ligand binding to a receptor in cell signalling?
What is the result of ligand binding to a receptor in cell signalling?
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What type of bond is formed between a ligand and its receptor?
What type of bond is formed between a ligand and its receptor?
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What is the function of the binding domain pocket in a receptor?
What is the function of the binding domain pocket in a receptor?
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What type of receptor is the Inositol triphosphate (IP3) receptor?
What type of receptor is the Inositol triphosphate (IP3) receptor?
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What is the term for the number that describes a ligand's affinity for a receptor?
What is the term for the number that describes a ligand's affinity for a receptor?
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What is the purpose of computer models in ligand-receptor interactions?
What is the purpose of computer models in ligand-receptor interactions?
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What type of receptor is the Vascular endothelial growth factor receptor?
What type of receptor is the Vascular endothelial growth factor receptor?
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What is the primary function of Ligand Binding Domains (LBDs) in receptors?
What is the primary function of Ligand Binding Domains (LBDs) in receptors?
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What is the consequence of ligand binding to receptors in cell signalling?
What is the consequence of ligand binding to receptors in cell signalling?
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What determines the rate of response in cell signalling?
What determines the rate of response in cell signalling?
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What is the intermediate step between signal reception and cellular response in cell signalling?
What is the intermediate step between signal reception and cellular response in cell signalling?
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What is the functional significance of steroid signalling molecules?
What is the functional significance of steroid signalling molecules?
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What is the role of receptors in cell signalling?
What is the role of receptors in cell signalling?
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What is the primary function of signal transduction in cell signalling?
What is the primary function of signal transduction in cell signalling?
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What is the common property of signalling molecules that bind to intracellular receptors?
What is the common property of signalling molecules that bind to intracellular receptors?
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What is the primary function of the cytoplasmic tyrosine kinase domain in enzyme-coupled receptors?
What is the primary function of the cytoplasmic tyrosine kinase domain in enzyme-coupled receptors?
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What is the result of ligand binding to receptor tyrosine kinases?
What is the result of ligand binding to receptor tyrosine kinases?
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What is the purpose of protein tyrosine phosphatases in receptor tyrosine kinase signaling?
What is the purpose of protein tyrosine phosphatases in receptor tyrosine kinase signaling?
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What is the key difference between receptor tyrosine kinases and non-receptor tyrosine kinases?
What is the key difference between receptor tyrosine kinases and non-receptor tyrosine kinases?
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What is the role of the transmembrane alpha helix in enzyme-coupled receptors?
What is the role of the transmembrane alpha helix in enzyme-coupled receptors?
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What happens when acetylcholine binds to the extracellular binding domain of ion channel linked receptors?
What happens when acetylcholine binds to the extracellular binding domain of ion channel linked receptors?
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What is the result of phosphorylation of the receptor tyrosine kinase domain?
What is the result of phosphorylation of the receptor tyrosine kinase domain?
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What is the characteristic feature of G-protein coupled receptors?
What is the characteristic feature of G-protein coupled receptors?
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What is the purpose of the cytoplasmic domain of enzyme-coupled receptors?
What is the purpose of the cytoplasmic domain of enzyme-coupled receptors?
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What is the final stage of cell signaling in receptor tyrosine kinase signaling?
What is the final stage of cell signaling in receptor tyrosine kinase signaling?
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What is the role of G-proteins in signal transduction?
What is the role of G-proteins in signal transduction?
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What is the function of the transmembrane domain in G-protein coupled receptors?
What is the function of the transmembrane domain in G-protein coupled receptors?
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What is the result of ligand binding to G-protein coupled receptors?
What is the result of ligand binding to G-protein coupled receptors?
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What is the characteristic feature of the intra-cellular domain of G-protein coupled receptors?
What is the characteristic feature of the intra-cellular domain of G-protein coupled receptors?
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What is the role of the α, β, and γ subunits in G-proteins?
What is the role of the α, β, and γ subunits in G-proteins?
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What is the difference between Ion Channel linked receptors and G-protein coupled receptors?
What is the difference between Ion Channel linked receptors and G-protein coupled receptors?
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What is the result of the conformational change in the G-protein coupled receptor?
What is the result of the conformational change in the G-protein coupled receptor?
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What is the function of enzyme-coupled receptors?
What is the function of enzyme-coupled receptors?
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What happens to the alpha subunit after the signal has been transmitted?
What happens to the alpha subunit after the signal has been transmitted?
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What type of receptors have intrinsic enzymatic activity?
What type of receptors have intrinsic enzymatic activity?
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What is the role of the beta/gamma subunit in the G-protein coupled receptor?
What is the role of the beta/gamma subunit in the G-protein coupled receptor?
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What is the result of ligand binding to enzyme-coupled receptors?
What is the result of ligand binding to enzyme-coupled receptors?
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What happens to the G-protein coupled receptor after the signal has been transmitted?
What happens to the G-protein coupled receptor after the signal has been transmitted?
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What is the role of G-protein coupled receptors?
What is the role of G-protein coupled receptors?
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What is the primary characteristic of steroid signalling molecules that allows them to interact with receptors?
What is the primary characteristic of steroid signalling molecules that allows them to interact with receptors?
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What is the result of ligand binding to receptors in cell signalling?
What is the result of ligand binding to receptors in cell signalling?
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What is the term for the region of a receptor that forms temporary non-covalent bonds with a signalling molecule?
What is the term for the region of a receptor that forms temporary non-covalent bonds with a signalling molecule?
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What determines the rate of response in cell signalling?
What determines the rate of response in cell signalling?
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What is the intermediate step between signal reception and cellular response in cell signalling?
What is the intermediate step between signal reception and cellular response in cell signalling?
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What is the role of receptors in cell signalling?
What is the role of receptors in cell signalling?
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What is the final stage of cell signalling?
What is the final stage of cell signalling?
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What is the purpose of transcriptional regulatory elements in cell signalling?
What is the purpose of transcriptional regulatory elements in cell signalling?
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What is the largest group of enzyme coupled receptors?
What is the largest group of enzyme coupled receptors?
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What is the effect of ligand binding on RTKs?
What is the effect of ligand binding on RTKs?
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What is the role of protein tyrosine phosphatases (PTP) in RTKs?
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What is the difference between RTKs and non-receptor tyrosine kinase receptors?
What is the difference between RTKs and non-receptor tyrosine kinase receptors?
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What is the next step in a cell signalling mechanism after signal reception?
What is the next step in a cell signalling mechanism after signal reception?
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What is the role of phosphorylated domains in RTKs?
What is the role of phosphorylated domains in RTKs?
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What is the structure of enzyme coupled receptors?
What is the structure of enzyme coupled receptors?
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What is the result of RTK dimer formation?
What is the result of RTK dimer formation?
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What type of receptor is the vascular endothelial growth factor receptor classified as?
What type of receptor is the vascular endothelial growth factor receptor classified as?
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What is the term for the interaction points between the ligand and receptor that are vital for correct orientation within the receptor's binding domain pocket?
What is the term for the interaction points between the ligand and receptor that are vital for correct orientation within the receptor's binding domain pocket?
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What is the result of ligand binding to the receptor in cell signalling?
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What type of receptor is the rhodopsin receptor classified as?
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What determines the affinity of a ligand for a given receptor?
What determines the affinity of a ligand for a given receptor?
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What is the category of receptors that the inositol triphosphate (IP3) receptor belongs to?
What is the category of receptors that the inositol triphosphate (IP3) receptor belongs to?
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What is the term for the constant that describes the affinity of a ligand for a given receptor?
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What is the purpose of computer models in predicting the interaction between the ligand and receptor?
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What happens when IP3 binds to calcium channels located within the smooth endoplasmic reticulum?
What happens when IP3 binds to calcium channels located within the smooth endoplasmic reticulum?
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What is the role of diacyl glycerol (DAG) in intracellular signalling?
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What is the function of phospholipase C (PPC) in receptor-mediated signalling?
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What is the effect of G-protein coupled receptor activation on phospholipase C (PPC)?
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What is the role of protein kinase C (PKC) in intracellular signalling?
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What is the function of inositol triphosphate (IP3) in receptor-mediated signalling?
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What type of receptor is involved in the described signalling pathway?
What type of receptor is involved in the described signalling pathway?
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What is the role of phosphatidyl inositol (PTI) in receptor-mediated signalling?
What is the role of phosphatidyl inositol (PTI) in receptor-mediated signalling?
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What is the primary function of the alpha subunit in G-protein coupled receptors?
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What is the significance of the GTPase activity in G-protein coupled receptors?
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What is the primary characteristic of receptor tyrosine kinases (RTKs)?
What is the primary characteristic of receptor tyrosine kinases (RTKs)?
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What is the primary function of enzyme-coupled receptors?
What is the primary function of enzyme-coupled receptors?
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What is the primary difference between receptor tyrosine kinases (RTKs) and non-receptor tyrosine kinase receptors?
What is the primary difference between receptor tyrosine kinases (RTKs) and non-receptor tyrosine kinase receptors?
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What is the primary role of G-proteins in signal transduction?
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What is the significance of GTP hydrolysis in G-protein coupled receptors?
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What is the primary characteristic of non-receptor tyrosine kinase receptors?
What is the primary characteristic of non-receptor tyrosine kinase receptors?
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Match the following types of cell signaling with their examples:
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Study Notes
Cell Cycle
- G1 phase: Cell grows in size, synthesizing mRNA and proteins required for DNA synthesis
- S phase: DNA is duplicated, producing a second copy of genomic DNA
- G2 phase: New proteins are produced, needed for progression to mitosis
- G0 phase: Resting state, where the cell is not actively dividing and instead maintains normal functions
Cell Cycle Checkpoints
- R point during G1: Cell checks DNA quality and detects damage
- G1/S checkpoint: P53 guards the genome, ensuring DNA is not damaged
- G2/M checkpoint: Ensures DNA is not damaged before entering mitosis
- Checkpoints are only activated in response to DNA damage
P53 and Cell Cycle Regulation
- P53 works with MDM2 and ATM to regulate the cell cycle
- P53 phosphorylation promotes transcription of downstream proteins involved in upregulation of pro-apoptotic factor Bax
- P21 arrests the cell cycle, allowing for DNA repair mechanisms to function
Cell Signalling
- Signalling molecules (ligands) bind to receptors on target cells
- Signalling molecules can be small and hydrophobic, moving through the plasma membrane
- Signalling molecules can bind to extracellular receptors, leading to a signalling cascade
Signal Reception
- Receptors have active sites, referred to as Ligand Binding Domains (LBD)
- LBDs form temporary non-covalent bonds with signalling molecules
- Receptor-ligand binding complexes result in conformational change, activating the receptor function
Intracellular Signalling Transduction
- Secondary messenger molecules: Calcium, cAMP, cGMP, Inositol triphosphate
- Proteins controlling signal progression: Phosphorylation, Acetylation, Methylation
Cellular Response
- Final step in cell signalling pathway
- Signal reaches response elements, mediated by activation of nuclear receptors
- Nuclear receptors directly regulate transcription, binding directly to host DNA
Cell Cycle
- G1 phase: Cell grows in size, synthesizing mRNA and proteins required for DNA synthesis
- S phase: DNA is duplicated, producing a second copy of genomic DNA
- G2 phase: New proteins are produced, needed for progression to mitosis
- G0 phase: Resting state, where the cell is not actively dividing and instead maintains normal functions
Cell Cycle Checkpoints
- R point during G1: Cell checks DNA quality and detects damage
- G1/S checkpoint: P53 guards the genome, ensuring DNA is not damaged
- G2/M checkpoint: Ensures DNA is not damaged before entering mitosis
- Checkpoints are only activated in response to DNA damage
P53 and Cell Cycle Regulation
- P53 works with MDM2 and ATM to regulate the cell cycle
- P53 phosphorylation promotes transcription of downstream proteins involved in upregulation of pro-apoptotic factor Bax
- P21 arrests the cell cycle, allowing for DNA repair mechanisms to function
Cell Signalling
- Signalling molecules (ligands) bind to receptors on target cells
- Signalling molecules can be small and hydrophobic, moving through the plasma membrane
- Signalling molecules can bind to extracellular receptors, leading to a signalling cascade
Signal Reception
- Receptors have active sites, referred to as Ligand Binding Domains (LBD)
- LBDs form temporary non-covalent bonds with signalling molecules
- Receptor-ligand binding complexes result in conformational change, activating the receptor function
Intracellular Signalling Transduction
- Secondary messenger molecules: Calcium, cAMP, cGMP, Inositol triphosphate
- Proteins controlling signal progression: Phosphorylation, Acetylation, Methylation
Cellular Response
- Final step in cell signalling pathway
- Signal reaches response elements, mediated by activation of nuclear receptors
- Nuclear receptors directly regulate transcription, binding directly to host DNA
Ligands and Receptors
- Ligands are chemical groups that bind to and affect receptor molecules, found intracellularly and extracellularly.
- A ligand's affinity for a receptor is described using a dissociation constant (Kd), where a smaller number indicates increased affinity.
Types of Ligands
- Hormones (e.g., noradrenaline)
- Cytokines (e.g., NF-κβ)
- Growth Factors (e.g., Endothelial growth factor)
- Neurotransmitters (e.g., Serotonin)
- ATP
- Pheromones
Cell Signaling Receptors
- Cell surface receptors fall into 3 categories:
- Ion Channel linked (e.g., Acetylcholine (Ach) ligand gated channel)
- G-protein coupled (e.g., Rhodopsin)
- Enzyme coupled receptors (e.g., Vascular endothelial growth factor receptor)
- Intracellular receptors (e.g., Inositol triphosphate (IP3) receptor)
Ligand-Receptor Interactions
- Hydrophilic interactions, or polar interactions, are vital for the correct orientation of the ligand within the receptor's binding domain pocket.
- Computer models can predict these interactions, but there are limitations.
- Binding of the ligand to the receptor usually causes a conformational change within the receptor.
Cell Signaling
- Signaling molecules (ligands) bind to receptors present either intracellularly or extracellularly on target cells.
- Signaling molecules have different properties, such as steroids being small hydrophobic molecules that can move through the plasma membrane unimpeded.
- Alternatively, signaling molecules bind to extracellular receptors, either being internalized following receptor binding or leading to the induction of a signaling cascade.
Cell Signaling Steps
- Signaling ligand molecule is produced and released, binding to a relevant receptor.
- Binding of the ligand to the receptor results in an intracellular signal transduction, involving several intermediates.
- Activation of a cellular response – immediate changes or slower changes.
Signal Reception
- Receptors, like enzymes, have active sites referred to as Ligand binding domains (LBDs).
- LBDs are regions of receptors that form temporary non-covalent bonds with signaling molecules, causing conformational changes within receptors, activating their function.
Ion Channel Linked Receptors
- Ion Channel linked receptors are linked to acetylcholine receptors found in muscles.
- Acetylcholine binds to the extracellular binding domain of the ion channel, causing a conformational change within the structure of the membrane protein, resulting in increased permeability of the membrane to sodium ions.
G-Protein Coupled Receptors
- G-protein coupled receptors are the most common variety of receptor, with 700 different types.
- They are the most diverse group of receptors, involved in response to the widest variety of signals.
- G-protein coupled receptors are characterized by a large extracellular ligand binding domain, a transmembrane domain, and a protein-binding intracellular domain.
Enzyme Coupled Receptors
- Enzyme coupled receptors have a ligand-binding extracellular domain, a single transmembrane alpha helix, and a cytoplasmic tyrosine kinase domain.
- Inactive enzyme coupled receptors exist as monomeric proteins, which, following ligand binding, form protein dimers leading to the activation of the tyrosine kinase domain.
Receptor Tyrosine Kinases (RTKs)
- RTKs are the largest group of enzyme coupled receptors, with 58 known RTKs subdivided into 20 subfamilies.
- RTKs have a ligand binding extracellular domain, a single transmembrane alpha helix, and a cytoplasmic tyrosine kinase domain.
- Inactive RTKs exist as monomeric proteins, which, following ligand binding, form protein dimers leading to the activation of the tyrosine kinase domain.
Enzyme-Coupled Receptors
- There are four types of enzyme-coupled receptors: receptor tyrosine kinases (RTKs), receptor serine threonine kinases, receptor tyrosine phosphatases, and receptor guanylyl cyclases.
- RTKs are the largest group of enzyme-coupled receptors, with 58 known RTKs divided into 20 subfamilies.
- Enzyme-coupled receptors have a ligand binding extracellular domain, a single transmembrane alpha helix, and a cytoplasmic tyrosine kinase domain.
- Inactive enzyme-coupled receptors exist as monomeric proteins, and ligand binding leads to the formation of protein dimers, activating the tyrosine kinase domain.
Receptor Tyrosine Kinases (RTKs)
- Ligand binding leads to the formation of RTK dimers.
- Dimer formation activates the intrinsic tyrosine kinase activity.
- Kinase activity self-phosphorylates the receptor, activating it.
- Phosphorylated domains recruit cell signaling intermediates, allowing for signal transduction.
- RTK phosphorylation is regulated by protein tyrosine phosphatases (PTP), removing phosphates and deactivating the receptor following ligand release and returning it to the resting state.
Signal Reception – Non-Receptor Tyrosine Kinase Receptors
- Ligand binding leads to phosphorylation of the non-receptor kinase located on the cytosolic domain of the receptor.
- Once phosphorylated, the non-receptor kinase phosphorylates the cytosolic domain of the receptor.
Cell Signaling Receptors
- Cell signaling receptors fall into four distinct categories: ion channel-linked receptors, G-protein-coupled receptors, enzyme-coupled receptors, and intracellular receptors.
- Cell surface receptors fall into three categories: ion channel-linked receptors, G-protein-coupled receptors, and enzyme-coupled receptors.
Cell Signaling
- Signaling molecules (ligands) bind to receptors present either intracellularly or extracellularly on target cells.
- Signaling molecules themselves can have different properties, such as steroids, which are small hydrophobic molecules that can move through the plasma membrane unimpeded.
- Binding of the ligand to the receptor usually causes a conformational change within the receptor.
- Cell signaling responses usually relate to the actual need of the cell in response to external stimuli, with the rate of response reflecting this.
Signal Reception
- Receptors have active sites, referred to as ligand binding domains (LBDs).
- LBDs are regions of receptors that can form temporary non-covalent bonds with signaling molecules, leading to a conformational change within the receptor, activating its function.
- Receptors can be either enzyme-coupled or G-protein-coupled receptors.
G-Protein Coupled Receptors
- G-protein coupled receptors have intrinsic GTPase activity, which is a vital component for returning the receptor to its resting state.
- The alpha subunit of the G-protein hydrolyzes the GTP molecule, releasing a phosphate and returning it to the resting state.
Intracellular Signaling
- Intracellular signaling can occur through direct ligand/receptor binding, where small hydrophobic molecules can diffuse across the plasma membrane.
- This results in the substitution of GDP with GTP within the alpha subunit of the G-protein.
- Activated beta/gamma subunits move to the receptor, inducing a conformational change, activating the protein channel.
- DAG activates protein kinase C (PKC), but is dependent on calcium ions to function.
- PKC then functions to activate a number of downstream targets.
Cell Signaling Pathway
- Signal transduction pathway: ligand binds to receptor, triggering a series of events that ultimately lead to a cellular response
- Steps in cell signaling:
- Signaling ligand molecule is produced and released
- Ligand binds to receptor, initiating an intracellular signal transduction
- Activation of cellular response, either immediate or slower changes
Nuclear Receptors
- Directly regulate transcription and bind directly to DNA
- 48 known nuclear receptors in the human genome
- Common structure: amino terminal domain, central conserved DNA binding domain, and conserved carboxy-terminal ligand binding domain
- 4 types of nuclear receptors
Juxtacrine Signaling
- Direct signals require physical contact between cells
- Three main categories of direct signaling:
- Membrane-bound ligands interacting with membrane-bound receptors
- Communicating junctions allowing transport of small molecules
- Extracellular matrix glycoproteins interacting with membrane proteins
- Notch signaling is a conserved cell signaling pathway present in most eukaryotic cells
Signal Reception
- Interaction between ligand and receptor, involving temporary non-covalent bonds
- Ligand binding domains (LBDs) are regions of receptors that form bonds with signaling molecules
- Ligand-receptor interaction results in conformational change, activating the receptor
Ligands and Receptors
- Ligands are chemical groups that bind to and affect receptor molecules
- Ligands can be hormones, cytokines, growth factors, neurotransmitters, ATP, and pheromones
- Receptors can be cell surface receptors (ion channel linked, G-protein coupled, or enzyme coupled) or intracellular receptors
Intracellular Signaling
- Binding of ligand to receptor causes a conformational change, activating the receptor
- Intracellular signaling can involve phospholipase C, releasing inositol triphosphate (IP3) and diacyl glycerol (DAG), leading to activation of protein kinase C (PKC)
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Description
Learn about the different stages of the cell cycle, including G1, S, G2, and G0 phases. Understand the processes of cell growth, DNA synthesis, and protein production.