Cell Biology: Rough Endoplasmic Reticulum
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Questions and Answers

What is the primary function of the rough endoplasmic reticulum (rER)?

The primary function of the rER is to synthesize proteins, particularly those destined for secretion outside the cell (e.g., hormones and enzymes) or for incorporation into lysosomes and the cell membrane.

Explain the relationship between the rER and the nuclear membrane.

The rER membrane is continuous with the outer membrane of the nuclear envelope. This continuity allows for communication between the perinuclear space (between the nuclear membranes) and the lumen of the rER.

Describe how the rER's appearance changes with the level of cellular activity.

In actively synthesizing cells, the rER cisternae are dilated, indicating high protein production. Conversely, in weakly active cells, the cisternae are flattened and less prominent.

Give three examples of cell types with high levels of rER and explain why.

<p>Examples include pancreatic exocrine cells, fibroblasts, and plasma cells. Pancreatic cells synthesize digestive enzymes, fibroblasts produce extracellular matrix proteins, and plasma cells produce antibodies, all requiring extensive protein production and thus high rER abundance.</p> Signup and view all the answers

Explain the process of how a membrane protein synthesized in the rER is incorporated into the cell membrane.

<p>Membrane proteins are synthesized in the rER and then transported in vesicles to the Golgi apparatus for further processing, including glycosylation. Once mature, they are packaged in secretory vesicles that bud off from the Golgi and fuse with the cell membrane, integrating the protein and lipids into the cell's outer layer.</p> Signup and view all the answers

Describe the process of ribosomal subunit formation and how these subunits function in protein synthesis.

<p>Ribosomal subunits are formed in the nucleus, where rRNA associates with proteins. These subunits then pass through nuclear pores into the cytoplasm, where they bind to mRNA and tRNA to facilitate protein synthesis. The small subunit decodes the genetic message, while the large subunit catalyzes peptide bond formation.</p> Signup and view all the answers

What are the two main categories of ribosomes, and how do their locations and functions differ?

<p>The two main types are free ribosomes and membrane-bound ribosomes. Free ribosomes are located in the cytoplasm and synthesize proteins destined for the cytoplasm, while membrane-bound ribosomes are attached to the endoplasmic reticulum and produce proteins that will either be secreted from the cell or incorporated into cell membranes.</p> Signup and view all the answers

Explain why free polyribosomes are important for the production of proteins like hemoglobin, contractile proteins, and keratin.

<p>Free polyribosomes are responsible for synthesizing proteins that remain within the cytoplasm of the cell. Hemoglobin, contractile proteins, and keratin are all found within the cytoplasm and are essential for various cellular functions, including oxygen transport, muscle contraction, and structural support, respectively.</p> Signup and view all the answers

What is the role of mRNA in protein synthesis, and how does its message relate to the sequence of amino acids in a protein?

<p>mRNA carries the genetic code from DNA to ribosomes, providing the instructions for building a specific protein. It contains a sequence of codons, each corresponding to a specific amino acid. Ribosomes read this sequence on mRNA and assemble the amino acids in the order dictated by the codons, ultimately forming the protein's primary structure.</p> Signup and view all the answers

How does the rough endoplasmic reticulum (RER) contribute to the synthesis and processing of proteins destined for secretion outside the cell?

<p>The RER is studded with ribosomes that synthesize proteins, many of which are destined for secretion. As these proteins are synthesized, they are translocated into the ER lumen, where they undergo folding and modifications, such as glycosylation, before being packaged into vesicles for transport to the Golgi apparatus and ultimately secretion outside the cell.</p> Signup and view all the answers

Describe the appearance of ribosomes under a scanning electron microscope, and how they differ in appearance from other cellular structures.

<p>Under a scanning electron microscope, ribosomes appear as small, spherical bodies. Their spherical shape distinguishes them from other cellular structures, such as elongated microtubules or flattened membrane sacs, which have different morphology.</p> Signup and view all the answers

Explain how the affinity of ribosomes for basic dyes is utilized in light microscopy.

<p>Ribosomes contain rRNA, which has a strong affinity for basic dyes. This property enables staining of ribosomes in light microscopy, allowing researchers to visualize them and distinguish them from other cellular components, enhancing the understanding of their distribution and activity within the cell.</p> Signup and view all the answers

Compare and contrast the functions of free polyribosomes and membrane-bound polyribosomes, providing examples of proteins they synthesize.

<p>Free polyribosomes produce proteins that remain within the cytoplasm, such as hemoglobin for oxygen transport, contractile proteins for muscle contraction, and keratin for structural support. Membrane-bound polyribosomes synthesize proteins destined for secretion, like hormones and enzymes, or for incorporation into cellular membranes, such as lysosomal enzymes and membrane proteins.</p> Signup and view all the answers

What are primary lysosomes and how are they formed?

<p>Primary lysosomes are organelles filled with hydrolase enzymes, formed by budding off vesicles from the trans-Golgi network.</p> Signup and view all the answers

What technique is used to visualize the Golgi apparatus in light microscopy?

<p>The silver impregnation technique, specifically Defano staining, is used to visualize the Golgi apparatus.</p> Signup and view all the answers

What role do mitochondria play in the cell?

<p>Mitochondria are known as the energy centers of the cell, creating and storing energy in the form of adenosine triphosphate (ATP).</p> Signup and view all the answers

Describe the structure of the inner mitochondrial membrane.

<p>The inner mitochondrial membrane has folds called cristae that increase its surface area significantly.</p> Signup and view all the answers

What is mitochondrial DNA and how does it compare to bacterial DNA?

<p>Mitochondrial DNA is circular in shape, resembling bacterial DNA, indicating evolutionary similarities.</p> Signup and view all the answers

What are ATP synthetases and where are they found?

<p>ATP synthetases, or oxisomes, are multimeric protein complexes found on the surface of the inner mitochondrial membrane.</p> Signup and view all the answers

Explain the significance of the Krebs cycle in cellular metabolism.

<p>The Krebs cycle is significant as it metabolizes glucose and fatty acids to produce ATP, essential for cellular functions.</p> Signup and view all the answers

What type of enzymes are contained within the mitochondrial matrix?

<p>The mitochondrial matrix contains enzymes for the Krebs cycle and oxidative phosphorylation.</p> Signup and view all the answers

From whom do children inherit mitochondrial DNA and how?

<p>Children inherit mitochondrial DNA only from their mother through the cytoplasm of the oocyte.</p> Signup and view all the answers

What is the significance of cardiolipin in the inner mitochondrial membrane?

<p>Cardiolipin makes the inner mitochondrial membrane significantly impermeable to ions, preserving the electrochemical gradient.</p> Signup and view all the answers

How do mitochondria contribute to ATP synthesis?

<p>Mitochondria synthesize ATP from ADP by using the energy released when protons flow through the oxisome down the electrochemical gradient.</p> Signup and view all the answers

What occurs to the number of mitochondria during cell division?

<p>During cell division, each daughter cell receives half of the number of mitochondria from the parent cell.</p> Signup and view all the answers

Why are skeletal muscles particularly sensitive to mitochondrial damage?

<p>Skeletal muscles are high-energy consumers, making them particularly sensitive to defects in mitochondrial function.</p> Signup and view all the answers

What role do lysosomes play in the cell?

<p>Lysosomes are responsible for intracellular digestion, breaking down bacteria, viruses, and degenerated organelles.</p> Signup and view all the answers

What crucial protein is involved in the formation of enveloped vesicles in cells?

<p>Clathrin is a crucial protein that plays a major role in the formation of enveloped vesicles.</p> Signup and view all the answers

What is the primary function of peroxisomes within a cell?

<p>Peroxisomes primarily break down fatty acids and detoxify harmful substances, including hydrogen peroxide.</p> Signup and view all the answers

How do peroxisomes differ from lysosomes in terms of enzymatic content?

<p>Peroxisomes contain oxidative enzymes and catalases, while lysosomes primarily contain hydrolytic enzymes for breaking down macromolecules.</p> Signup and view all the answers

What staining method is used for visualizing glycogen in hepatocytes?

<p>The Periodic Acid-Schiff (PAS) staining method is used to visualize glycogen in hepatocytes.</p> Signup and view all the answers

Describe the similarity between peroxisomes and mitochondria.

<p>Both peroxisomes and mitochondria contain enzymes synthesized in free polyribosomes and have the ability to replicate by fission.</p> Signup and view all the answers

What types of cellular inclusions can be found in the cytoplasm?

<p>Cellular inclusions can include glycogen, fat droplets, and pigments such as melanin.</p> Signup and view all the answers

What are primary lysosomes and what is their function?

<p>Primary lysosomes are the initial lysosomal structures that contain digestive enzymes, responsible for breaking down cellular waste and foreign material.</p> Signup and view all the answers

What role do catalases play in peroxisomes?

<p>Catalases in peroxisomes break down hydrogen peroxide into water and oxygen, preventing cellular damage.</p> Signup and view all the answers

What is the approximate size range of peroxisomes?

<p>Peroxisomes typically range from 0.2 to 0.5 µm in diameter.</p> Signup and view all the answers

Explain the difference between autophagia and heterophagia.

<p>Autophagia involves the digestion of the cell's own worn-out organelles, while heterophagia refers to the digestion of external substrates that enter the cell.</p> Signup and view all the answers

How do fat droplets form in adipocytes?

<p>Fat droplets in adipocytes are formed from the accumulation of triglycerides and cholesterol.</p> Signup and view all the answers

What characterizes tertiary lysosomes and their name as 'residual bodies'?

<p>Tertiary lysosomes, or residual bodies, contain undigested materials that remain after enzymatic degradation, indicating a completed digestion process.</p> Signup and view all the answers

How does lipofuscin relate to aging cells?

<p>Lipofuscin is a pigment that accumulates in long-living cells such as neurons and cardiac muscle cells, indicating the presence of residual bodies and cellular aging.</p> Signup and view all the answers

What is the significance of visualization of lysosomes with the electron microscope?

<p>Electron microscopy reveals the high electron density of lysosomes, helping to distinguish between different types and functions during cellular digestion.</p> Signup and view all the answers

Describe the role of lysosomes in renal tubule cells.

<p>In renal tubule cells, lysosomes digest small proteins absorbed through endocytosis, breaking them down to amino acids for reuse.</p> Signup and view all the answers

What is the function of heterolysosomes within a cell?

<p>Heterolysosomes are involved in the digestion of material that comes into the cell, performing the breakdown of various substrates.</p> Signup and view all the answers

What is the location and relationship of lysosomes to Golgi cisternae?

<p>Lysosomes are typically found near Golgi cisternae, where they receive newly formed enzymes meant for digestion.</p> Signup and view all the answers

Flashcards

Rough Endoplasmic Reticulum (rER)

A type of endoplasmic reticulum that synthesizes proteins for secretion and those that remain in the cell.

Basophilia

The staining property of rER in cells, indicating high RNA content due to proteins being synthesized.

Protein-producing cells

Cells like pancreatic exocrine cells that actively synthesize and secrete proteins.

Glycosylation

The process of adding sugar chains to proteins in the Golgi apparatus, often for membrane proteins.

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Transport vesicles

Membrane-bound carriers that transport proteins from the rER to the Golgi apparatus and then to the cell membrane.

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Ribosome Synthesis

The process of creating ribosomes in the nucleolus using rRNA and proteins.

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Ribosomal Subunits

Small and large components of ribosomes formed in the nucleus, essential for protein synthesis.

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Free Ribosomes

Individual ribosomes in the cytoplasm that synthesize proteins for use within the cell.

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Polyribosomes

Clusters of ribosomes linked to mRNA, involved in translating the same mRNA into proteins.

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Membrane-bound Ribosomes

Ribosomes attached to the endoplasmic reticulum that synthesize proteins for export or for use in the cell membrane.

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mRNA Function

Messenger RNA carries the genetic code from DNA to ribosomes for protein synthesis.

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Translation Process

The stage in protein synthesis where mRNA is decoded by ribosomes to form polypeptide chains.

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Endoplasmic Reticulum (ER)

A network of membranes involved in synthesis and processing of biomolecules, including proteins.

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Hydrolase enzymes

Enzymes that catalyze the breakdown of compounds by hydrolysis.

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Primary lysosomes

Vesicles formed by budding from the trans-Golgi network, containing hydrolase enzymes.

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Golgi apparatus

Cell organelle that processes and packages proteins and lipids.

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Mitochondria

Organelles that produce ATP through metabolism of glucose and fatty acids.

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Krebs cycle

A series of chemical reactions used by all aerobic organisms to generate energy.

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Cristae

Folds in the inner mitochondrial membrane that increase surface area.

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Mitochondrial DNA

Circular DNA found within mitochondria, distinct from nuclear DNA.

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ATP synthetases

Enzymes located in the inner mitochondrial membrane that synthesize ATP.

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Peroxisomes

Membrane organelles that contain oxidative enzymes for breaking down fatty acids and toxins.

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Functions of Peroxisomes

Remove hydrogen peroxide, metabolize fatty acids, and protect cells from toxins.

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Catalases

Antioxidant enzymes found in peroxisomes that break down hydrogen peroxide into water and oxygen.

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Cellular Inclusions

Deposits of cell products like glycogen, fat droplets, and pigments within the cytoplasm.

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Glycogen

A polysaccharide stored in liver cells that is a key energy source in metabolism.

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Staining Method: PAS

Periodic acid-Schiff staining is used to visualize glycogen in tissue samples.

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Fat Droplets

Storage forms of triglycerides and cholesterol found within adipocytes.

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Similarity to Mitochondria

Both peroxisomes and mitochondria can grow, replicate by fission, and contain synthesized enzymes.

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Secondary Lysosomes

Formed when primary lysosomes fuse with phagosomes for digestion.

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Tertiary Lysosomes

Residual bodies that contain undigested materials.

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Autophagia

The process where cells break down their own worn-out organelles.

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Heterophagia

Digestion of substances that enter the cell from the outside.

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Lipofuscin

A pigment formed by accumulated residual bodies indicating aging.

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Visualizing Lysosomes

Lysosomes appear as high electron density structures under TEM.

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Renal Tubule Cells

Cells that ingest small proteins via endocytosis and degrade them in lysosomes.

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Mitochondrial DNA inheritance

Mitochondrial DNA is inherited only from the mother.

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Mitochondrial membranes

Mitochondrial membranes are semi-permeable, allowing selective ion passage.

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Proton flow in mitochondria

Protons flow down the electrochemical gradient, releasing energy for ATP synthesis.

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Mitochondrial division

During cell division, daughter cells receive half the number of mitochondria.

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Mitochondrial defects

Defects in mitochondria can occur due to mutations in their DNA.

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Lysosomes

Lysosomes are membrane-bound vesicles containing hydrolytic enzymes for digestion.

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Clathrin role

Clathrin is a protein that aids in vesicle formation during endocytosis.

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Study Notes

Cell Morphology

  • This is a study of the form and structure of cells.
  • The institute for medical histology and embryology is involved in this area of study.

Cytoplasm

  • Plasma is a type of matter that doesn't neatly fit into the categories of gaseous, liquid, or solid.
  • Cytoplasm is a liquid medium within cells.
  • Kytos refers to cell.

Structural Components of Cytoplasm

  • Cytosol: The fluid component of the cytoplasm
  • Cell organelles: Specialized structures within the cytoplasm (e.g., mitochondria, ribosomes, Golgi apparatus)
  • Cellular inclusions: Substances or structures found in the cytoplasm that aren't organelles (e.g., glycogen, fat droplets)
  • Cytoskeleton: A network of protein filaments that provide structure and support.

Topographic Regions of Cytoplasm

  • Cortex: The outer layer of the cytoplasm.
  • Cytocenter, centrosome: A key component of the cell, involved in cell division.
  • Endoplasm: The internal region of the cytoplasm.

Cytosol Composition

  • Water (H₂O): The primary component.
  • Amino acids, proteins, enzymes, nucleotides, RNA, glucose, ATP, ions: These are all key components in the cell's activities.
  • The pie chart demonstrates the relative amounts of these components in S. cerevisiae (yeast) in the G1 phase.

Cell Organelles

  • The presentation displayed various cell organelles, indicating their components.

Ribosomes

  • Function: Protein synthesis
  • Structure: Composed of a large subunit (60S) and a small subunit (40S), both containing rRNA and proteins.
  • Ribosome synthesis starts in the nucleolus, and ribosomal subunits are then transported out into the cytoplasm

Synthesis of ribosomes

  • rRNK (ribosomal RNA) is produced in the nucleolus.
  • Polypeptide chains of rRNA and proteins assemble to create ribosomal subunits in the nucleus.
  • Ribosomal subunits exit the nucleus via the nuclear pores to become active in protein synthesis in the cytoplasm.

Ribosomal Function

  • Binding sites of rRNA and tRNA:Ribosomes include sites where mRNA and tRNA interact.
  • The small subunit decodes the genetic message.
  • The large subunit catalyzes peptide bond formation.

Free and Membrane-bound Ribosomes

  • Monoribosomes (monosomes): Individual ribosomes spread throughout the cytoplasm.
  • Polyribosomes (polysomes): Ribosomes interconnected by mRNA.

mRNA and Ribosomes

  • mRNA carries the genetic code for protein synthesis.
  • Free polyribosomes synthesize proteins that stay within the cell (examples include hemoglobin).
  • Membrane-bound polyribosomes synthesize proteins that leave the cell or remain within (examples include hormones, enzymes).

Endoplasmic Reticulum

  • A complex network of flattened sacs and tubules that extends throughout the cytoplasm.
  • RER (Rough ER): Studded with ribosomes, mainly involved in proteins synthesis for secretion.
  • SER (Smooth ER): Synthesizes lipids, steroid hormones, and glycogen.
  • Communication between parts and the perinuclear space.

Rough Endoplasmic Reticulum

  • Primary function: Protein synthesis
  • Active cells have dilated cisternae, while weakly active cells have flattened ones.
  • The RER membrane is an extension of the nuclear membrane.

Basophilia of the Rough Endoplasmic Reticulum

  • Exocrine pancreas cells have high levels of RER, causing basophilia on staining because of enzymes and proteins within.

Cells with intensive protein synthesis

  • Specific cell types (e.g., pancreatic exocrine cells, fibroblasts, plasma cells, nerve cells) have elevated protein synthesis reflected by rough ER.

Creation of Membrane Proteins

  • Membrane proteins are made in the rough ER, then move to the Golgi for glycosylation and modifications.
  • Mature proteins are transported in vesicles to the cell membrane, which incorporate them.

Smooth Endoplasmic Reticulum

  • It's a network of tubes and sacs, not attached to ribosomes.
  • Its function includes synthesis of lipids and steroids and cell detoxification.

Well-Developed Cisternae of Smooth Endoplasmic Reticulum

  • Cells like those in the liver, adrenal cortex, testes, or ovaries have lots of smooth ER.

Smooth Endoplasmic Reticulum in Kidney

  • The smooth ER in kidney cells synthesizes lipids and membrane proteins besides its role in protein synthesis. This is essential for various cellular activities with a significant role in the synthesis, regulation, and transport of molecules.

Mitochondria

  • Function: Energy production (ATP) through aerobic respiration (Krebs Cycle and oxidative phosphorylation).
  • Structure: Double membrane with inner folds (cristae). Has its own DNA and RNA.

Mitochondrial Matrix

  • The inner space of mitochondria, containing enzymes for respiration, DNA, and RNA.

Mitochondrial Defects

  • They are linked to mutations in nuclear or mitochondrial DNA (maternal inheritance).
  • Mitochondrial changes lead to muscle issues in some cases.

Lysosomes

  • Function: Intracellular digestion (breaking down bacteria, viruses, etc).
  • Structure: Membrane-bound organelles containing hydrolytic enzymes.
  • Primary Lysosomes: Inactive lysosomes filled with enzymes made in membranes. They originate from the trans-Golgi network.
  • Secondary Lysosomes: Lysosomes that fuse with endocytosed or damaged cellular components to digest these materials.
  • Tertiary Lysosomes (residual bodies): The remnants after the breakdown of substances in secondary lysosomes.
  • Lipofuscin is a byproduct that accumulates with aging.

Peroxisomes

  • Function: Lipid breakdown, detoxification.
  • Structure: Membrane-bound containing enzymes (including catalase for hydrogen peroxide breakdown); oxidative enzymes. Contain a crystalline core.
  • Peroxisomes are similar to mitochondria in that their enzymes are synthesized in the cytoplasm.
  • They grow and replicate through fission.

Cellular Inclusions

  • These are diverse non-organelle substances stored in the cytoplasm.
  • Examples include glycogen (energy storage), fat droplets, and pigments (like melanin).

Glycogen

  • An energy storage form of glucose.
  • Accumulates in highly metabolic cells, such as hepatocytes (liver cells).
  • PAS stain is often used to visualize glycogen.

Fat Droplets

  • Triglycerides and cholesterol stored in cells, particularly adipocytes, are examples of fat droplets.
  • Unilocular (single fat droplet) and multilocular (multiple fat droplets) adipocyte structures are observed.

Pigments

  • Melanin is a pigment found in specialized cells (melanocytes).
  • Melanin provides skin pigmentation but can be observed in other body parts, like adrenal glands.

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Description

This quiz explores the structure and function of the rough endoplasmic reticulum (rER) in cellular biology. It covers the relationship between the rER and the nuclear membrane, its role in protein synthesis, and how it contributes to cellular functions. Test your knowledge on ribosomes, mRNA, and examples of cells with high rER activity.

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