Cell Biology Overview and Theory
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Questions and Answers

What fundamental unit of life is cited in cell theory?

  • Cells (correct)
  • Atoms
  • Organisms
  • Molecules

Which scientist is most commonly credited with formulating cell theory in 1839?

  • Matthias Schleiden (correct)
  • Antoni van Leeuwenhoek
  • Robert Hooke
  • Rudolf Virchow

What type of organisms are classified as eukaryotic cells?

  • Bacteria
  • Viruses
  • Archaebacteria
  • Protozoa (correct)

What is a defining characteristic of prokaryotic cells?

<p>Lack of a nucleus (B)</p> Signup and view all the answers

What concept did cell theory help move away from?

<p>Spontaneous generation (A)</p> Signup and view all the answers

Which of the following statements about eukaryotic cells is true?

<p>They contain a true nucleus. (D)</p> Signup and view all the answers

Who was the first to observe bacteria using a microscope?

<p>Antoni van Leeuwenhoek (A)</p> Signup and view all the answers

What year was cell theory formulated?

<p>1839 (C)</p> Signup and view all the answers

What is the primary focus of cell biology?

<p>Understanding the functions and structures of cells (A)</p> Signup and view all the answers

Which of the following macromolecules are primarily studied in molecular biology?

<p>Proteins and nucleic acids (A)</p> Signup and view all the answers

How does molecular biology differ from cell biology?

<p>Molecular biology studies cellular systems at the molecular level. (C)</p> Signup and view all the answers

What is the main reason for primarily using male mice in research?

<p>To avoid interference from sex hormones. (C)</p> Signup and view all the answers

What percentage of genes found in mice have a human counterpart?

<p>99% (B)</p> Signup and view all the answers

What does the term 'cell' refer to in a biological context?

<p>The smallest unit of living matter capable of independent life (A)</p> Signup and view all the answers

What subject areas does cell biology typically draw on?

<p>Genetics, biochemistry, and immunology (D)</p> Signup and view all the answers

Which of the following organisms is primarily used for studying basic molecular processes?

<p>Escherichia coli (C)</p> Signup and view all the answers

What was published in 2002 concerning the mouse?

<p>The complete sequence of the mouse genome. (A)</p> Signup and view all the answers

What are the main interests of molecular biology?

<p>Exploring how molecular interactions regulate cell functions (C)</p> Signup and view all the answers

Which aspect is NOT commonly examined within cell biology?

<p>Molecular synthesis processes (C)</p> Signup and view all the answers

Which feature of the mouse is most influential in making it a suitable model organism for human research?

<p>The similarity of its genome to that of humans. (D)</p> Signup and view all the answers

What is a defining characteristic of cells as stated in the content?

<p>They are the smallest units capable of acting autonomously. (A)</p> Signup and view all the answers

In addition to pharmacology, which field relies significantly on mouse models?

<p>Neuroscience (D)</p> Signup and view all the answers

What aspect of mouse research has recently been emphasized for inclusion?

<p>Both male and female subjects. (A)</p> Signup and view all the answers

Which model organism is known for its use in studying developmental genetics?

<p>Drosophila melanogaster (D)</p> Signup and view all the answers

What is a key characteristic that makes E. coli a suitable model organism for genetic studies?

<p>It divides every 20 minutes under optimal conditions. (A)</p> Signup and view all the answers

What advantage does the small size of the E. coli genome offer for genetic research?

<p>It simplifies the processes of DNA replication and gene expression. (D)</p> Signup and view all the answers

Why might an organism's ability to be cultured in simple media be significant for laboratory studies?

<p>It reduces the need for complex nutrient solutions. (D)</p> Signup and view all the answers

What is one of the challenges associated with creating a new laboratory model organism?

<p>Developing techniques suitable for its study. (B)</p> Signup and view all the answers

Which of the following organisms is considered a rod-shaped bacterium commonly used in laboratories?

<p>Escherichia coli (C)</p> Signup and view all the answers

What is a crucial benefit of establishing a community of researchers around a new model organism?

<p>It ensures knowledge is generated and shared collaboratively. (A)</p> Signup and view all the answers

What is NOT a property that helps make an organism suitable for laboratory studies?

<p>Having a complex cellular structure (B)</p> Signup and view all the answers

Most of our understanding of fundamental life mechanisms has come from studies performed on which organism?

<p>Escherichia coli (B)</p> Signup and view all the answers

What is the primary application of Arabidopsis thaliana in agriculture?

<p>Improvement of species (C)</p> Signup and view all the answers

Which feature distinguishes Danio rerio from other fish species?

<p>Its transparent embryos for developmental observation (D)</p> Signup and view all the answers

What is the genome size of Arabidopsis thaliana?

<p>125 million base pairs (C)</p> Signup and view all the answers

How long does it take for Danio rerio embryos to develop all organs and tissues?

<p>24 hours (B)</p> Signup and view all the answers

What percentage of genes in Arabidopsis thaliana are similar to human genes?

<p>30% (D)</p> Signup and view all the answers

What unique characteristic allows zebrafish to coexist with various species?

<p>Resistance to environmental variations (B)</p> Signup and view all the answers

What was George Streinsinger's contribution to the study of Danio rerio?

<p>Proposing its use for studying developmental processes (A)</p> Signup and view all the answers

What type of diet do zebrafish primarily have?

<p>Omnivorous (C)</p> Signup and view all the answers

What does Forward Scatter (FSC) primarily indicate in the analysis of cells?

<p>The relative size of the cell (A)</p> Signup and view all the answers

Which of the following methods is commonly used to break down cell membranes?

<p>Osmotic shock (A)</p> Signup and view all the answers

What technique is used to achieve a higher degree of purification of organelles?

<p>Density gradient centrifugation (B)</p> Signup and view all the answers

During differential centrifugation, what factor primarily determines how quickly cellular components settle?

<p>The size and density of the components (D)</p> Signup and view all the answers

What is the role of ultracentrifuge in studying cellular components?

<p>It processes samples at high speeds to generate high gravitational forces (D)</p> Signup and view all the answers

Which of the following statements about Side Scatter (SSC) is correct?

<p>It indicates the internal complexity or granularity of the cell (C)</p> Signup and view all the answers

Which organelle's separation often requires enzymatic methods when dealing with cells that have a cell wall?

<p>Plasma membrane (B)</p> Signup and view all the answers

What is one of the typical outcomes of centrifugation in the context of subcellular separation?

<p>Formation of a precipitate based on size and density (C)</p> Signup and view all the answers

Flashcards

What is Biology?

Biology is the study of living organisms, encompassing their composition, development, functioning, interactions, and distribution.

What is a cell?

A cell is the fundamental, self-replicating unit of life. It's like the building block for all living organisms.

What is Cell Biology?

Cell Biology is the discipline focused on the analysis of cells. It delves into their structure, function, components, interactions, and properties.

What is Molecular Biology?

Molecular Biology focuses on the biochemical processes that occur within living organisms. It examines the interplay of key molecules like DNA and proteins.

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What's the difference between Cell Biology and Molecular Biology?

The key difference is that Cell Biology focuses on the cell as a whole unit, while Molecular Biology zooms in on the specific functions of molecules within the cell.

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What is the significance of cells?

Cells are the basic structural, functional, and biological units of all known organisms. They are the smallest entities capable of independent functioning.

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How do multicellular organisms develop?

Multicellular organisms develop from a single cell through a series of divisions and differentiations. It's a journey from one cell to a complex organism.

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What is the cell theory?

The cell theory states that all living organisms are composed of one or more cells and that all cells arise from pre-existing cells. It's the foundation of modern biology.

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Differential Centrifugation

A technique used to separate subcellular components based on their size and density. Larger and heavier structures settle faster.

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Density Gradient Centrifugation

A type of centrifugation that uses a gradient of a dense substance (like sucrose or cesium chloride) to separate organelles based on their density.

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Cell Lysis

A technique used to break open cells and release their internal components, such as organelles, for further analysis.

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Subcellular Fractionation

The process of separating subcellular components from each other, such as organelles, proteins, and nucleic acids.

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Forward Scatter (FSC)

A measurement of light scattered forward from a cell, indicating its relative size.

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Side Scatter (SSC)

A measurement of light scattered at 90 degrees from a cell, indicating its internal complexity or granularity.

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Light Scatter

The degree to which light is scattered by a cell, which can be used to distinguish cells based on their size and internal complexity.

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Universal Biological Principles

The study of one organism can provide valuable insights into the biology of others, including humans.

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Model Organisms

Organisms selected for research due to their suitability for laboratory studies, such as easy growth, rapid division, transparency, or readily accessible genetic information.

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Escherichia coli (E. coli)

A rod-shaped bacterium commonly found in the intestines of humans and other animals, extensively used in laboratory research.

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E. coli's Genome

E. coli's genetic material is arranged in a single, circular DNA molecule.

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E. coli's Division Rate

E. coli divides rapidly, usually every 20 minutes under optimal conditions.

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Advantages of E. coli for Research

E. coli's relatively small and well-characterized genome simplifies genetic studies and manipulations.

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E. coli's Contributions to Biology

E. coli has been instrumental in advancing our understanding of fundamental biological processes like DNA replication, the genetic code, and protein synthesis.

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Creating New Model Organisms

The fact that any living organism can potentially be a model organism, but establishing it for laboratory use is a complex and challenging process.

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Who discovered cells?

Robert Hooke was an English scientist who observed cells for the first time in 1665, using a microscope. He examined thin slices of cork and observed small, box-like compartments that he named "cells".

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Who observed 'animalcules'?

Antoni van Leeuwenhoek was a Dutch scientist who made significant contributions to microscopy. He built simple microscopes with high magnification and observed various single-celled organisms like protozoa, bacteria, and sperm cells.

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What is cell theory?

Cell theory is a fundamental principle in biology that explains the basic building blocks of all living organisms. It states that all living things are composed of one or more cells; the cell is the fundamental unit of structure and organization in organisms; and cells arise from pre-existing cells.

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What are prokaryotes?

Prokaryotic cells are simple, single-celled organisms that lack a nucleus and other membrane-bound organelles. They are generally smaller than eukaryotic cells and include bacteria and archaea.

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What are eukaryotes?

Eukaryotic cells are complex cells with a nucleus and other membrane-bound organelles. They include all organisms except bacteria and archaea, such as protozoa, plants, fungi, and animals.

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When did life first emerge on Earth?

The first life forms on Earth emerged around 3.8 billion years ago, a significant period following the formation of the Earth. This suggests that life has been evolving for billions of years, constantly adapting to changing environmental conditions.

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Why is biology a historical science?

Biology is a historical science because the current diversity and forms of life are a result of a long evolutionary history. By studying fossils and comparing organisms, scientists can piece together the evolutionary relationships and adaptations that have shaped the living world.

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Knock-out mouse

A type of laboratory mouse genetically engineered to have a specific gene removed or inactivated. These mice are valuable for studying the function of that gene in development and disease.

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Transgenic mouse

A laboratory mouse that has been genetically modified to carry a foreign gene that is not normally found in its genome. These mice are used to study the effects of the introduced gene.

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Genome

The complete set of genetic instructions in an organism, encoded in DNA. It provides the blueprint for all the characteristics of an organism.

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Gene

The basic unit of heredity, made up of DNA. Genes contain the instructions for building and maintaining an organism.

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Base pair

The smallest unit of DNA, containing the building blocks of genetic information.

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Biological Modeling

The use of living organisms to study biological phenomena and processes. Model organisms are selected for their suitability for experimentation and the relevance of their biology to other species.

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Drosophilia Melanogaster

Animal tissue development and differentiation, cancer model: The fruit fly (Drosophila melanogaster) is a powerful model organism for studying a wide range of biological processes, including development. Their rapid lifecycle and ease of genetic manipulation make them ideal for studying developmental genetics, cell signaling, and even insights into human diseases like cancer.

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Zebrafish characteristics

The zebrafish (Danio rerio) is a small, active fish, commonly found in aquariums. They are native to calm, sometimes stagnant waters of central Asia, specifically the Ganges region in India. Adult zebrafish are typically between 3-5 cm long, with an elongated shape and a dorsal fin. They have distinct bluish bands along their sides, with males having a golden background and females a silver background. These stripes have earned them the name 'zebrafish'. Their ventral area is whitish and pinkish.

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Zebrafish lifestyle and reproduction

Zebrafish are easy to maintain, resilient to environmental changes, and can live with various other species. They are omnivores, eating mosquito larvae, other insects, and microscopic algae. They lay between 200 to 300 eggs, and their embryos develop externally. The embryos are transparent, making it possible to observe all stages of embryonic development. Zebrafish have a relatively short generation time of 3-4 months.

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Zebrafish as a model organism

George Streinsinger, a scientist from the University of Oregon, proposed using zebrafish in the 1970s to study complex biological processes like development and the nervous system. This was due to their transparent embryos and rapid development, offering a unique window into these intricate processes.

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Arabidopsis thaliana: A Model Plant

Arabidopsis thaliana, a small flowering plant, is widely used as a model organism in plant biology. Its genome is relatively small (125 million base pairs), and the complete sequence is known. It contains around 25,498 genes, with significant duplication (only 15,000 unique genes). Its complexity is comparable to C. elegans and fruit flies. Notably, about 30% of its genes share similarity with human genes.

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Arabidopsis thaliana: Practical Advantages

Arabidopsis thaliana's small size and ease of growth in laboratory settings make it ideal for research. It is also amenable to genetic manipulation, allowing researchers to study gene function and plant development with great precision.

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Arabidopsis thaliana: Applications

Arabidopsis thaliana's research has wide-ranging applications. It helps in improving agricultural practices, such as developing pest-resistant crops. It also provides insights into human health, specifically aging mechanisms and unraveling the causes of complex disorders.

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Animal vs. Plant Development: Similarities and Differences

Animal development and plant development share similarities and differences. Both involve the processes of cell division, differentiation, and pattern formation. However, the specific mechanisms and sequences of events can vary significantly depending on the organism.

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Organismal Development: A Symphony of Events

The development of an organism from a single fertilized egg to a complex multicellular organism is a fascinating process. It involves a series of precisely regulated events, including cell division, differentiation, and pattern formation. This process ensures the formation of all tissues and organs, ultimately shaping the organism into its final form.

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Study Notes

Cell Biology Overview

  • Biology is the study of the composition, development, functioning, links, and distribution of living things.
  • Cells are the fundamental unit of living beings, capable of independent reproduction.
  • Cell biology is the study of cells, focusing on their structure, function, components, interactions, and properties. It encompasses genetics, biochemistry, immunology, and other related disciplines.
  • Molecular biology focuses on the processes within living beings at a molecular level, particularly the interactions of macromolecules like nucleic acids (DNA, RNA) and proteins.

Cell Theory

  • All living organisms are composed of one or more cells.
  • The cell is the basic unit of structure and organization in organisms.
  • Cells arise from pre-existing cells.
  • Heredity information (DNA) is passed on from cell to cell.

Prokaryotic vs. Eukaryotic Cells

  • Prokaryotic cells ("before the nucleus") lack a nucleus and other membrane-bound organelles. Examples include bacteria and archaea.
  • Eukaryotic cells ("true nucleus") contain a nucleus and membrane-bound organelles. Examples include protozoa, plants, fungi, and animals.
  • Prokaryotic cells are smaller than eukaryotic cells.
  • Prokaryotes have circular DNA, Eukaryotes have linear DNA molecules.

Origin and Evolution of Cells

  • Life emerged at least 3.8 billion years ago.
  • Biology is a historical science, with the forms and structures of the living world resulting from billions of years of evolution.
  • Robert Hooke (1635-1703) observed cells in cork.
  • Antoni van Leeuwenhoek (1632-1723) observed protozoa, bacteria, and other cells using microscopes.
  • Cell theory was formulated in 1839, primarily by Matthias Schleiden and Theodor Schwann.

Spontaneous Formation of Organic Molecules

  • Stanley Miller (1930-2007) conducted experiments showing the formation of organic molecules (like amino acids) under possible early Earth conditions.
  • The next step in evolution was the formation of macromolecules.

RNA Self-Replication

  • RNA has the ability to catalyze its own replication, making it a potential candidate for the first self-replicating molecule.

Central Dogma of Molecular Biology

  • DNA—>RNA—>Protein.
  • DNA replicates, transcribes into RNA, and is translated into proteins.

Genetic Code

  • The genetic code determines how the sequence of nucleotides in DNA translates into the amino acid sequence of proteins.

Coating the Self-replicating RNA with a Phospholipid Membrane

  • Phospholipid membranes have a hydrophilic head and two hydrophobic tails. -The first cell is believed to have arisen from the coating of self-replicating RNA and its associated molecules by a membrane composed of phospholipids.

Evolution of Metabolism

  • Glycolysis is the anaerobic breakdown of glucose into lactic acid.
  • Photosynthesis uses sunlight to create glucose from carbon dioxide and water, releasing oxygen.
  • Oxidative metabolism breaks down glucose in the presence of oxygen into carbon dioxide and water, releasing more energy than glycolysis.

Current Prokaryotes

  • Two major types: archaebacteria and bacteria.
  • Various shapes and sizes.
  • Possess DNA, cell membrane, cytoplasm (with ribosomes) and nucleoid (DNA without nuclear membrane).

Eukaryotic Cells

  • Cellular components including cytoskeleton, organelles (mitochondria, chloroplasts, endoplasmic reticulum, Golgi), Nucleus, etc.
  • Plants and animals are eukaryotes.

Cell Theory Continued

  • The evolution of multicellular organisms from single-celled eukaryotes is believed to have occurred 1000-2000 million years ago.
  • Increased cell specialization and division of labor led to the diversity of cell types in today's plants and animals.

Animal Tissues

  • Animal tissues are diverse and include epithelial, connective, blood, nervous, and muscle tissues.

Epithelial Cells

  • Epithelial cells form sheets that cover body surfaces and line internal organs.
  • These cells have a variety of specialized functions including protection, absorption, and secretion.

Connective Tissues

  • Connective tissues, including bone, cartilage, and adipose tissue, are composed of varied cell types that support and connect other tissues.

Blood

  • Blood contains different cell types that function in oxygen transport, inflammatory reactions, and immune responses.

Nervous Tissue

  • Nervous tissue is composed of neurons, specialized in transmitting signals throughout the body.

Muscle Tissue

  • Muscle cells are responsible for force production and movement and are differentiated into smooth, skeletal, and cardiac types.

Model Organisms

  • Model organisms (species easily studied in a lab) are used to understand fundamental biological processes in other organisms, including humans.
  • Commonly studied species: E. coli (bacteria), yeast, Drosophila melanogaster (fruit fly), Caenorhabditis elegans (nematode), Danio rerio (zebrafish), Mus musculus (mouse), Arabidopsis thaliana (plant).
  • Specific advantages of different organisms are noted.
  • Reasons for choosing these models in research are discussed to highlight the criteria for selecting specific organisms to study certain processes.

Cell Biology Instruments

  • Optical microscopy, electron microscopy, super-resolution microscopy
  • Light microscopes: magnifying light to view samples.
  • Electron microscopes: using electrons to view finer details of cells.
  • Other techniques include: specimen preparation , flow cytometry, subcellular separation, growth of animal cells in culture, and viral preparations for cell studies.

Immunohistochemical Techniques

  • Immunohistochemistry can be direct (using labeled antibodies) or indirect (using multiple antibodies) to locate specific proteins in tissues.

Flow Cytometry

  • Flow cytometry is used for quantifying the cell number, size, and complexity.
  • Uses a fluidic sample transport system, optical laser illumination, and electronic detectors to analyze cells.
  • Forward scatter (FSC) and side scatter (SSC) are used to identify cell size and internal complexity.

Subcellular Separation

  • Different techniques are used to separate parts of cells to understand their composition and function.
  • Methods such as osmotic shock, ultrasound, mechanical grinding, and enzymatic methods (e.g., lysozyme) are essential in this process.

Differential and Density Gradient Centrifugation

  • Differential centrifugation separates cellular components based on size and density.
  • Density gradient centrifugation further refines the separation.

Cell Cultures

  • Cell cultures are cells grown outside of the living organism in controlled conditions.
  • Types or cultures: Primary cultures (first isolation); Secondary cultures (further growth of a primary culture); Immortal cells (from tumors); Embryonic Stem cells (from embryos).
  • Necessary culture media (including salts, glucose, and vitamins; often serum, a source of polypeptide growth factors).

Viruses

  • Viruses require a host cell to reproduce and have a short life cycle.
  • Growing viruses in the lab may involve animal, plant, or microbial cell cultures.
  • Viruses provide simple systems for studying parts of cell function.
  • Studies of viruses have advanced cell biology.

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Description

Explore the fundamental aspects of cell biology, including the characteristics and definitions of prokaryotic and eukaryotic cells. This quiz covers key concepts such as cell theory and the molecular components that govern cellular functions. Test your knowledge on the basic unit of life and the processes that drive living organisms.

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