Cancer Biology Profile of a Cancer Cell Part-2

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Questions and Answers

What are the consequences of deamination in DNA bases?

  • It prevents any base from pairing with adenine.
  • It causes the complete breakdown of the DNA strand.
  • It alters the base-pairing properties and can lead to mutations. (correct)
  • It results in the addition of extra bases to the DNA sequence.

What type of damage can ultraviolet radiation cause to DNA?

  • It causes depurination of adenine and guanine.
  • It promotes the replication of DNA to repair the damage.
  • It triggers the formation of covalent bonds between adjacent pyrimidine bases. (correct)
  • It directly breaks the sugar-phosphate backbone of DNA.

Which of the following is a result of spontaneous mutations in DNA?

  • Reduction in the overall DNA replication rate.
  • Direct exposure to environmental toxins.
  • Loss of adenine or guanine due to depurination. (correct)
  • Increased metabolic activity of the cell.

What can be inferred about the frequency of deamination in human cells?

<p>Approximately 100 deaminations happen every day in human cells. (B)</p> Signup and view all the answers

What is the primary impact of thymine dimers on DNA replication?

<p>They distort the configuration of DNA and often block replication. (B)</p> Signup and view all the answers

What is the primary role of the photolyase enzyme in UV repair mechanisms?

<p>It binds to thymine dimers and cleaves them using visible light energy. (D)</p> Signup and view all the answers

Which type of DNA repair pathway is specifically responsible for correcting mispairings of bases during replication?

<p>Mismatch repair pathway (A)</p> Signup and view all the answers

What condition is characterized by an inherited mutation affecting the nucleotide excision repair system, leading to a high susceptibility to skin cancer?

<p>Xeroderma pigmentosum (A)</p> Signup and view all the answers

In the base excision repair mechanism, what is the function of DNA glycosylases?

<p>To remove damaged or deaminated DNA bases. (D)</p> Signup and view all the answers

What is the significance of mismatch repair in relation to hereditary nonpolyposis colon cancer?

<p>It maintains genomic stability by correcting replication errors. (D)</p> Signup and view all the answers

Flashcards

DNA Damage

Changes in DNA base sequence, occurring spontaneously or due to environmental factors.

Spontaneous Mutations

DNA changes happening without external causes.

Depurination

Loss of adenine or guanine bases in DNA due to spontaneous hydrolysis.

Deamination

Removal of an amino group from a DNA base, altering base-pairing.

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Mutation-causing agents

Substances or factors that increase the rate of DNA mutations.

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Ultraviolet radiation

Causes covalent bonds between adjacent pyrimidine bases in DNA, forming dimers.

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Thymine Dimers

Covalent bonds between adjacent thymine bases in DNA, caused by UV.

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Bulky lesions

Structural distortions in DNA, often caused by damage, blocking replication.

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Direct Repair

A DNA repair mechanism where a specific enzyme recognizes and fixes the damage.

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Photolyase

An enzyme responsible for repairing thymine dimers in DNA, utilizing visible light

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Proofreading Repair

DNA polymerase's quality control mechanism that corrects errors during DNA replication.

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Base Excision Repair

A type of excision repair that corrects single damaged bases in DNA.

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Nucleotide Excision Repair (NER)

A DNA repair mechanism that removes larger DNA lesions, such as pyrimidine dimers.

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Xeroderma pigmentosum

An inherited condition causing extreme sensitivity to sunlight due to defects in NER.

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Mismatch Repair

A DNA repair mechanism that corrects mismatched bases in DNA.

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Hereditary Nonpolyposis Colon Cancer (HNPCC)

An inherited disease that increases the risk of colon cancer due to faulty mismatch repair.

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UV Sterilization

A method of disinfection using ultraviolet light.

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Thymine Dimer

A type of DNA damage caused by UV light where two adjacent thymines bond together.

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Study Notes

Cancer Biology Profile of a Cancer Cell Part-2

  • The lecture covers the traits of cancer cells, cancer cells and the cell cycle, cancer cells and apoptosis, cancer cells and DNA damage, tumor immunology, molecular changes in cancer cells, and repair pathways.
  • Objectives include cancer cells and DNA damage, tumor immunology, molecular changes in cancer cells.
  • Mutations in DNA are spontaneous or due to exposure to mutation-causing agents in the environment.
  • Types of mutations include physical mutations (ionizing radiations, non-ionizing radiations, heat) and chemical mutagens (alkalizing agents, deaminating agents, intercalating agents).
  • Examples of physical mutagens include gamma rays, X-rays, UV rays, alpha particles, beta particles, and fast neutrons, while chemical mutagens include halouracil, mitomycin, proflavine, sodium azide, nitrosoguanidine, nitrogen mustard, ethyl methyl sulfate, uridine derivatives, hydroxyl amine, diethyl sulfate, acridine orange, and nitrous acid.
  • Common DNA damage includes depurination (loss of adenine or guanine) and deamination (removal of a base's amino group).
  • Ultraviolet radiation causes covalent bonds to form between adjacent pyrimidine bases, most commonly thymine dimers.
  • Repair pathways for DNA damage include:
    • Direct repair: using a photolyase enzyme in organisms that absorbs visible light to cleave the thymine dimer.
    • Proofreading repair: DNA polymerase corrects mismatched bases.
    • Excision repair:
      • Base excision repair corrects single damaged bases (e.g., DNA glycosylases remove deaminated bases).
      • Nucleotide excision repair removes pyrimidine dimers and other lesions (e.g., NER endonuclease enzyme).
  • Xeroderma pigmentosum is caused by mutations in genes coding for components of the NER system. People with this condition have an extremely high risk of developing skin cancer.
  • Mismatch repair is critical for maintaining DNA
    • Mismatch repair system excises the new strand in any region
    • This procedure uses the original strand as a template.
  • Postreplication repair and SOS Repair
    • Occurs when DNA replication skips over a lesion; e.g a thymine dimer
    • Involves recombination of the parental strand
    • SOS repair is a global cellular response to DNA damage in bacteria.
  • Nonhomologous end-joining and homologous recombination
    • Repair for double-strand breaks
      • Nonhomologous end-joining joins DNA fragments directly -Error-prone, as it cannot prevent loss of nucleotides or prevent DNA fragments from different chromosomes from being joined.
      • Homologous recombination utilizes a homologous chromosome copy as a template.
        • A more precise repair mechanism.
  • Women who inherit mutations in BRCA1 or BRCA2 have a high risk of breast and ovarian cancer.
  • Cancer cells exhibit genetic instability, often being aneuploid. aneuploidy generally involves both the loss of some chromosomes and an extra copies of other chromosomes.
  • The Philadelphia chromosome is found in nearly 90% of people with chronic myelogenous leukemia with DNA breakage and reciprocal exchange. This translocation produces the BCR-ABL fusion gene. The immune system can protect against cancer. However, there is no adequate immune response due to certain tumor cells' tactics in evading the immune response.
  • Immune cells can present and attack antigens or kill cells.
  • Cancer cells produce various antigens including tumor-specific
    • Unique to tumor cells, and not found in normal cells,
    • Can induce responses leading to tumor rejection
  • Tumor-associated antigens
    • Expressed on normal and tumor cells
    • Do not generally induce tumor rejection
  • MAGE antigens are expressed in some cancers and not in most normal tissues that are close to being tumor-specific.
  • Cancer vaccines can consist of synthetic MAGE peptides to induce immune responses.
  • Cancer cells can evade the immune response by producing molecules that kill lymphocytes, forming surrounding tissue to shield them from immune attack, or dividing quickly.
  • Cancer cells have reduced gap junctions, altered clump tendencies in the presence of lectins, and diminished or missing E-cadherin, which is related to cell-to-cell communication.
  • Cancer cells produce embryonic proteins (e.g., alpha-fetoprotein, carcinoembryonic antigen) and hormones (e.g., chorionic gonadotropin, placental lactogen) which can serve as markers or stimulate blood vessel growth.

Next Lecture

  • How cancers spread

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