Biology Chapter 6: Translation Basics
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Questions and Answers

What type of bond holds amino acids together during translation?

  • Disulfide bond
  • Hydrogen bond
  • Ionic bond
  • Peptide bond (correct)

What is the primary function of the Shine-Dalgarno sequence in bacteria?

  • To recruit RNA polymerase
  • To facilitate ribosome binding to mRNA (correct)
  • To initiate transcription
  • To terminate translation

What amino acid does the start codon in bacteria typically code for?

  • Methionine (correct)
  • Fucose
  • Glycine
  • Alanine

Which site on the ribosome does the first tRNA occupy when translation begins?

<p>P site (A)</p> Signup and view all the answers

What is a characteristic feature of tRNA structures?

<p>Single-stranded loops with double-stranded stems (A)</p> Signup and view all the answers

What are the possible configurations of a viral genome?

<p>Segmented, circular, linear, complex (A)</p> Signup and view all the answers

What is the term used for a virus that infects bacteria?

<p>Phage (B)</p> Signup and view all the answers

What is the definition of a virion?

<p>The complete virus particle outside a host cell (C)</p> Signup and view all the answers

What type of molecule typically serves as viral receptors on host cells?

<p>Proteins or glycoproteins (C)</p> Signup and view all the answers

Which enzyme is primarily used by T4 and other bacteriophages to exit the host cell?

<p>Lysozyme (D)</p> Signup and view all the answers

What term describes a host cell that supports viral replication?

<p>Permissive cell (D)</p> Signup and view all the answers

What are the clear zones formed due to viral lysis in a culture called?

<p>Phage plaques (C)</p> Signup and view all the answers

Which nucleic acid polymerase is responsible for copying RNA into RNA?

<p>RNA-dependent RNA polymerase (B)</p> Signup and view all the answers

Flashcards

Viral Symmetries

The three common viral symmetries are helical, icosahedral, and complex. Icosahedral is the most efficient arrangement because its shape allows for the maximum amount of internal volume with the least amount of surface area, making it more stable and economical to produce.

Enveloped Virus Entry

Enveloped viruses, specific to animal cells, typically enter the host cell through fusion with the cell membrane. They exit by budding, where the viral envelope pinches off from the host cell membrane.

Viral Enzymes

Three common enzymes carried within viral capsids are: 1) RNA polymerase (copies RNA into RNA), 2) Reverse transcriptase (copies RNA into DNA), and 3) Integrase (integrates viral DNA into host genome).

Viral Replication Phases

The five phases of a viral replication cycle are: 1) Attachment, 2) Penetration, 3) Uncoating, 4) Synthesis, 5) Assembly and Release. The cycle describes how a virus infects and propagates within a host cell.

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Lysogenic Conversion

Lysogenic conversion occurs when a temperate bacteriophage incorporates its DNA into the host's genome. This can result in expression of new genes by the host, potentially causing changes in its phenotype.

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What bond joins amino acids?

A peptide bond forms between the carboxyl group of one amino acid and the amino group of the next amino acid, releasing a water molecule.

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Where is the anticodon loop on tRNA?

The anticodon loop is located in the middle of the tRNA molecule, forming a loop with three unpaired bases.

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What does the anticodon recognize?

The anticodon loop on tRNA recognizes a specific codon on mRNA, pairing with it through complementary base pairing.

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What is a degenerate code?

The genetic code is degenerate because a single amino acid can be encoded by multiple codons (more codons than amino acids).

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What is the wobble hypothesis?

The wobble hypothesis explains how a single tRNA can recognize more than one codon, due to flexible base pairing at the third position of the codon.

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What is the most common start codon in bacteria?

The most common start codon in bacteria is AUG, which codes for methionine.

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What does the Shine-Dalgarno sequence do?

The Shine-Dalgarno sequence is a ribosomal binding site located upstream from the start codon in bacterial mRNA, helping to align the ribosome for translation initiation.

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What is an obligate intracellular parasite?

An obligate intracellular parasite is an organism that requires a host cell to replicate and survive. Viruses are an example.

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Study Notes

Chapter 6 Materials: Translation

  • Amino acids are held together by a bond formed during translation.

  • The anticodon loop is found within a tRNA molecule.

  • The anticodon is complementary to a codon.

  • tRNA has a double-stranded stem-loop secondary structure.

  • The amino acid is attached to the 3' end of the tRNA.

  • An enzyme charges tRNA with an amino acid.

  • A degenerate code has more codons than amino acids.

  • The wobble hypothesis explains the flexibility in the third base of a codon-anticodon pairing.

  • The typical start codon in bacteria is AUG, which codes for methionine.

  • Archaea and eukaryotes typically begin proteins with methionine.

  • The Shine-Dalgarno sequence in mRNA helps ribosomes bind to the mRNA.

  • A stop codon signals the end of protein synthesis.

  • In bacteria, (and many archaea and eukaryotes), an open reading frame on mRNA starts with the codon AUG and ends with a stop codon.

  • The three stages of translation are initiation, elongation, and termination; translation requires energy.

  • Prokaryotic and eukaryotic ribosomes have differing structures.

  • 2 rRNA components have crucial roles in translation.

  • The bacterial initiation complex includes mRNA, initiator tRNA, and the ribosome.

  • The first tRNA binds to the ribosome's P site.

  • Newly charged tRNAs enter the A site.

  • Peptide bond formation occurs at the ribosome's P site.

  • Polyribosomes are multiple ribosomes translating a single mRNA.

  • Translation terminates with a stop codon.

Chapter 5 and Extra Animal Virus/Sub-viral Material (Ch 11): Viruses and Their Replication

  • Viruses are obligate intracellular parasites.
  • A virion is a complete virus particle.
  • Virus infection is the invasion of a host cell by a virus.
  • Capsids, nucleocapsids, naked viruses, and enveloped viruses are defined.
  • Enveloped viruses gain their membrane from the host cell.
  • A viral genome can have 4 different configurations.
  • Viruses have a size range.
  • A capsid is the protein coat surrounding the viral genome.
  • Protein molecules that make up viral capsids are defined.
  • 3 common viral symmetries (shapes) are described and one is more efficient than the others and why.
  • Enveloped viruses typically enter/exit host cells differently than naked viruses.
  • Viral enzymes carried within the viral capsid are defined and their functions.
  • Enzymes copy RNA to RNA, RNA to DNA, and DNA to DNA.
  • Animal viruses are cultivated in host cells or host cell lines.
  • Infectious units/volume is a virus concentration measurement.
  • Viral replication has 5 phases.
  • The major difference between prokaryotic and eukaryotic viral penetration is discussed.
  • Receptors on host cells are described.
  • Enzymes involved in viral entry and exit are described.
  • 3 types of anti-viral mechanisms in prokaryotes are described.
  • 3 general types of viral proteins are classified and their roles.
  • Virus life cycles (lytic and lysogenic) are defined and differentiated.
  • Factors that induce the lytic pathway in lysogenic viruses occur.
  • Lysogenic conversion is defined.

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Test your knowledge on the key concepts of translation in biology. This quiz covers topics such as tRNA structure, codon-anticodon interactions, and the stages of translation. Dive into the details of amino acid bonding and the importance of start and stop codons!

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