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What is the purpose of analytical techniques and instrumentation in a modern clinical chemistry laboratory?
What is the purpose of analytical techniques and instrumentation in a modern clinical chemistry laboratory?
They provide the foundation for all measurements made in a modern clinical chemistry laboratory.
What is a spectrophotometer used for?
What is a spectrophotometer used for?
A spectrophotometer is used to measure the light transmitted by a solution to determine the concentration of the light-absorbing substance in the solution.
What does Beer's Law state?
What does Beer's Law state?
Beer's Law states that the concentration of a substance is directly proportional to the amount of light absorbed or inversely proportional to the logarithm of the transmitted light.
What are the two main types of light sources used for work in the visible and near-infrared region?
What are the two main types of light sources used for work in the visible and near-infrared region?
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What is the main purpose of a monochromator in a spectrophotometer?
What is the main purpose of a monochromator in a spectrophotometer?
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What are the two main types of detectors used in spectrophotometers?
What are the two main types of detectors used in spectrophotometers?
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What is the role of the sample cell or cuvette in a spectrophotometer?
What is the role of the sample cell or cuvette in a spectrophotometer?
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Which of the following are some of the limitations of using a spectrophotometer?
Which of the following are some of the limitations of using a spectrophotometer?
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What is the name of the technique that measures the concentration of specific elements in a sample by measuring the absorption of light by atoms of a particular element?
What is the name of the technique that measures the concentration of specific elements in a sample by measuring the absorption of light by atoms of a particular element?
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What are the main parts of an atomic absorption spectrophotometer?
What are the main parts of an atomic absorption spectrophotometer?
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What is the purpose of the atomizer in AAS?
What is the purpose of the atomizer in AAS?
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Which of the following are some of the limitations of atomic absorption spectroscopy?
Which of the following are some of the limitations of atomic absorption spectroscopy?
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What does the acronym "ESI" stand for, and how is this method used in mass spectrometry?
What does the acronym "ESI" stand for, and how is this method used in mass spectrometry?
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What is the goal of tandem mass spectrometry (MS/MS) in terms of analysis?
What is the goal of tandem mass spectrometry (MS/MS) in terms of analysis?
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What is the main purpose of Fluorometry?
What is the main purpose of Fluorometry?
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What is the basic principle of fluorometry?
What is the basic principle of fluorometry?
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What are some of the limitations of fluorometry?
What are some of the limitations of fluorometry?
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How is fluorometry being used in the medical and pharmaceutical sciences?
How is fluorometry being used in the medical and pharmaceutical sciences?
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What is the core principle of electrochemistry?
What is the core principle of electrochemistry?
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Give three key principles of electrochemistry.
Give three key principles of electrochemistry.
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List the main parts of an electrochemical system.
List the main parts of an electrochemical system.
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What are Ion-Selective Electrodes (ISEs) used for?
What are Ion-Selective Electrodes (ISEs) used for?
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What is the principle behind Ion-Selective Electrodes (ISEs)?
What is the principle behind Ion-Selective Electrodes (ISEs)?
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What are the five main parts of an ISE?
What are the five main parts of an ISE?
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What are some of the limitations of Ion-Selective Electrodes?
What are some of the limitations of Ion-Selective Electrodes?
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How is electrophoreses used in a lab?
How is electrophoreses used in a lab?
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What are the three principles of electrophoresis?
What are the three principles of electrophoresis?
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What are the main parts of an electrophoresis system?
What are the main parts of an electrophoresis system?
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What are some of the limitations of electrophoresis?
What are some of the limitations of electrophoresis?
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What is osmometry used for?
What is osmometry used for?
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On what principle is osmometry based?
On what principle is osmometry based?
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What are the main components of an osmometer?
What are the main components of an osmometer?
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What is chromatography, and what is its main purpose?
What is chromatography, and what is its main purpose?
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Which of the following are modes of separation used in chromatography?
Which of the following are modes of separation used in chromatography?
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What is the main advantage of high-performance liquid chromatography (HPLC)?
What is the main advantage of high-performance liquid chromatography (HPLC)?
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What are the main components of an HPLC system?
What are the main components of an HPLC system?
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In HPLC, what is the purpose of the pump?
In HPLC, what is the purpose of the pump?
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In HPLC, what is the role of the column?
In HPLC, what is the role of the column?
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What is the purpose of the detector in HPLC?
What is the purpose of the detector in HPLC?
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What is the main purpose of the recorder in HPLC?
What is the main purpose of the recorder in HPLC?
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What is gas chromatography (GC) used for?
What is gas chromatography (GC) used for?
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What are the main differences between gas chromatography (GC) and high-performance liquid chromatography (HPLC)?
What are the main differences between gas chromatography (GC) and high-performance liquid chromatography (HPLC)?
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What is mass spectrometry (MS), and for what purpose is it employed?
What is mass spectrometry (MS), and for what purpose is it employed?
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Describe the steps involved in mass spectrometry for analyzing a sample.
Describe the steps involved in mass spectrometry for analyzing a sample.
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What is the main purpose of the mass analyzer in MS?
What is the main purpose of the mass analyzer in MS?
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What is the purpose of a detector in MS?
What is the purpose of a detector in MS?
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What is the main goal of tandem mass spectrometry (MS/MS)?
What is the main goal of tandem mass spectrometry (MS/MS)?
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What is the main advantage of using high-resolution mass spectrometry?
What is the main advantage of using high-resolution mass spectrometry?
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What is full width at half maximum (FWHM), and how does it relate to mass spectrometer resolution?
What is full width at half maximum (FWHM), and how does it relate to mass spectrometer resolution?
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Study Notes
Analytical Techniques
- Analytical techniques form the foundation of measurements in modern clinical chemistry laboratories.
- Key techniques include spectrophotometry, fluorometry, electrochemistry, and chromatography.
Table of Contents
- Spectrophotometry
- Fluorometry
- Electrochemistry
- Chromatography
Spectrophotometric Instruments
- Spectrophotometer measures transmitted light to determine the concentration of a light-absorbing substance.
- Beer's Law states that the concentration of a substance is directly proportional to the amount of light absorbed or inversely proportional to the logarithm of the transmitted light.
Transmittance
- % Transmittance = (T/1) x 100
- T is defined as 100% T.
- T = (Sample beam signal / Blank beam signal) x 100
Absorbance
- Absorbance (A) = -log(I/I0)
- A = εbc
- ε is the molar absorptivity, b is the path length, and c is the concentration.
Example Calculation
- Incident light intensity: 0.50 W/m²
- Intensity entering detector: 0.36 W/m²
- Calculate transmittance:
- %T = [(0.36 W/m²) / (0.50 W/m²)] x 100 = 72%
- Determine absorbance
- A = -log(0.72) = 0.14
Example Calculation 2
- Solution concentration (c): 0.25 M.
- Path length (b): 1 cm.
- Absorbance (A): 0.075
- Calculate molar absorptivity (ε):
- ε = A / (bc) = 0.075 / (1 cm x 0.25 M) = 0.3 M-1cm-1
Components of a Spectrophotometer
- Light Source:
- Incandescent tungsten or tungsten-iodide lamps for visible and near-infrared.
- Deuterium-discharge lamp and mercury-arc lamp for ultraviolet (UV) work.
- Monochromators: isolates individual wavelengths of light.
- Sample Cell: cuvets (round or square), discard scratched ones.
- Photodetector:
- Photocell: light-sensitive material (selenium) on a plate of iron.
- Phototube: photosensitive material gives off electrons when light strikes.
- Photomultiplier (PM) tube: detects and amplifies radiant energy.
Limitations of a Spectrophotometer
- Potential interference from other sample substances absorbing light at similar wavelengths
- Biological samples can be complex matrices, affecting measurement accuracy
- The stability and calibration of light sources, detectors, and optical components also affect accuracy.
Clinical Applications of Spectrophotometer
- Biochemical analysis: measuring enzyme activities, metabolites, etc.
- Clinical diagnostics: quantifying hormones, vitamins.
- Drug monitoring: ensure therapeutic ranges.
- Quality control: ensuring reliability of results.
- Research applications: studying biochemical pathways, etc.
Atomic Absorption Spectrometry
- Atomic absorption spectrometry determines the concentration of specific elements in a sample.
- It works by measuring absorbance of light by atoms of a particular element.
- Components include:
- Light source(hollow cathode lamp): emits light specific to the element.
- Atomizer (flame or graphite furnace): converts sample into atoms.
- Monochromator: isolates the specific wavelength of light absorbed by the element.
- Detector: measures transmitted light intensity.
Atomic Absorption Spectrometry—Applications
- Metal Toxicity Assessment: Measuring lead levels in blood to diagnose and monitor lead poisoning (especially in children).
- Assessing mercury levels in blood/urine to assess exposure to this toxic metal.
- Diagnosing deficiencies and excess of essential metals like copper, zinc, iron, magnesium.
- Analyzing trace elements like chromium, selenium, manganese which are metabolically important.
- Monitoring therapeutic levels of metal-based drugs like lithium and platinum-based anticancer agents.
- Detect and quantify metals in biological samples for forensic investigations of poisoning cases.
- Analyze food samples in dietary intake assessments.
Limitations of Atomic Absorption Spectrometry
- Limited to elemental analysis; cannot directly analyze molecules or compounds.
- Matrix effects; presence of other elements can interfere with the analysis.
- Instrumentation is complex and requires skilled operators.
Fluorometry
- Fluorometry measures fluorescence emitted from a sample.
- Fluorescence is the release of light from a substance that has absorbed light or electromagnetic energy (at a different wavelength).
- Applications are in various fields, including pharmacology, biochemistry, molecular biology, environmental research, and more. Used to measure protein, nucleic acid, and environmental pollutant concentration.
Components of a Fluorometer
- Components include excitation source (lamp or laser), excitation monochromator, sample cell, emission monochromator, detector, recorder/data acquisition system.
- Specific components such as filter systems may be used.
Applications of Fluorometry
- Biochemical analysis: analyzes concentration, structure, interactions among compounds like proteins and nucleic acids.
- Environmental sciences: detects pollutants like polycyclic aromatic hydrocarbons (PAHs), heavy metals, other contaminants in water, soil, and air, etc.
- Medical and pharmaceutical sciences: screening and characterizing potential drugs, assessing binding affinity of compounds to target proteins.
Limitations of Fluorometry
- Analyze only fluorescent molecules, not all.
- Difficult to measure excitation and emission spectra simulatenously
- Solutions of dilute sample compounds are less stable
- pH changes and presence of oxygen affect fluorescent intensity.
- Chemical changes can occur when samples are subjected to UV absorption.
- Not all compounds can be analyzed by fluorometry.
Electrochemistry
- Electrochemistry studies the relationship between chemical reactions and electricity.
- Basic principles include Faraday's Law of Electrolysis, Nernst Equation, and Butler-Volmer Equation.
Parts of an Electrochemical System
- Electrodes (anode and cathode)
- Electrolyte (solution or gel)
- Electrochemical cell
- Power source (e.g., potentiostat or galvanostat)
- Measurement instruments (e.g., voltammeter, ammeter)
Limitations of Electrochemical Techniques
- Complex instrumentation & setup
- Electrode fouling or degradation
- Interference from electrolytes or sample matrix
- Limited sensitivity and selectivity
Clinical Applications of Electrochemical Techniques
- Diagnosis and monitoring of diseases (e.g., diabetes, cancer).
- Biosensors for biomarker detection.
- Electrochemical therapy for medical procedures (electrocautery, electroporation).
- Implantable devices (e.g., pacemakers, cochlear implants).
- Wound healing & tissue engineering.
Ion-Selective Electrodes
- Ion selective electrodes (ISEs) measure the concentrations of specific ions in a solution.
- The principle is based on the Nernst equation: E = E° + (RT/nF) * In(a)
Parts of an ISE
- Ion-selective membrane
- Internal reference electrode
- External reference electrode
- Electrode body
- Connector or cable
Limitations of ISEs
- Limited selectivity and sensitivity
- Interference from other ions or substances
- Temperature and pH dependence
- Calibration requirements
- Limited dynamic range
Clinical Applications of ISEs
- Acid-base balance assessment
- Diagnostic testing (e.g., kidney function, cardiac function, neurological disorders)
- Monitoring patients (e.g., ICU patients, dialysis patients) with electrolyte imbalances.
Electrophoresis
- Electrophoresis separates charged particles (DNA, RNA, proteins) based on size and charge.
- Principles include electrophoretic mobility (movement influenced by charge, size, and shape), electroendosmosis (solvent movement affecting migration), and sieving (separation based on size as particles pass through medium pores).
Components of Electrophoresis System
- Electrophoresis chamber
- Power supply
- Electrodes (anode and cathode)
- Gel or capillary medium
- Sample wells or injection system
- Detection system (e.g. UV, fluorescence, staining)
Limitations of Electrophoresis
- Time-consuming and labor-intensive
- Specialized equipment needed
- Limited resolution and sensitivity
- Sample preparation may be challenging
- Sample matrix/contaminants may present interference.
Clinical Electrophoresis Applications
- DNA analysis (genotyping, sequencing, fingerprinting)
- Protein analysis (identification, quantification, purification)
- Genetic disorder diagnosis (e.g. sickle cell anemia)
- Forensic analysis (DNA profiling)
- Cancer research and monitoring.
Osmometry
- Osmometry measures the osmotic pressure or concentration of solutes in a solution.
- Principle: based on the osmotic pressure equation: Π = CRT
- Π is osmotic pressure, C is solute concentration, R is the ideal gas constant, and T is absolute temperature).
Components of an Osmometer
- Osmotic cell
- Semi-permeable membrane
- Pressure sensor
- Temperature control unit
- Data acquisition system
Limitations of Osmometry
- Limited accuracy and precision
- Requires calibration
- Sample preparation can be challenging
- Interference from contaminants or sample matrix
- Limited dynamic range
Clinical Applications of Osmometry
- Diagnosis and monitoring of diseases (Diabetes insipidus, Diabetes mellitus).
- Kidney diseases(e.g. nephrotic syndrome)
- Liver diseases (e.g., cirrhosis)
- Serum osmolality, urine osmolality, and blood glucose level measurements
- Quality control of injectable solutions; stability testing of pharmaceuticals
Chromatography
- Chromatography separates complex mixtures based on interactions between individual compounds and the stationary phase of the system.
- Includes various types such as adsorption, partition, steric exclusion, gel filtration and gel permeation, ion-exchange, and thin-layer chromatography (TLC).
HPLC (High-Performance Liquid Chromatography)
- Modern technique using pressure for fast separations, controlled temperature, inline detectors, and gradient elution techniques.
- Components include reservoir, pump, column, detector, and display.
GC (Gas Chromatography)
- Separation method for volatile compounds from non-volatile mixtures.
- Components include gas source, injector, column, and detector.
Mass Spectrometry
- Measures mass-to-charge ratio of ions to quantify chemical species.
- Principle of separating ions based on their mass-to-charge ratio (m/z).
- Includes Sample Introduction/Ionization(like Electron Ionization, Atmospheric Pressure Chemical Ionization and Electrospray Ionization) and Mass Spectrometer Analyzer (like Quadrupole, Ion Trap).
- Commonly used in clinical applications for drug screening, diagnosis, and metabolic profiling.
Limitations
- Many methods are labor intensive, time-consuming
- Sophisticated equipment involved
- Expertise/skilled operators needed
Clinical Applications
- Various methods used in pharmaceuticals, to detect and quantify drugs and metabolites or contaminants, diseases detection, and forensic investigations.
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