Alkyl Halides and Nucleophilic Substitution PDF

Chapter-2 Alkyl Halides and Nucleophilic Substitution Introduction to Alkyl Halides: Alkyl halides are organic molecules containing a halogen atom bonded to an sp3 hybridized carbon atom. Alkyl halides are classified as primary (1°), secondary (2°), or tertiary (3°), depending on the n...

Chapter-2 Alkyl Halides and Nucleophilic Substitution Introduction to Alkyl Halides: Alkyl halides are organic molecules containing a halogen atom bonded to an sp3 hybridized carbon atom. Alkyl halides are classified as primary (1°), secondary (2°), or tertiary (3°), depending on the number of carbons bonded to the carbon with the halogen atom. The halogen atom in halides is often denoted by the symbol “X”. 1 Physical Properties: Alkyl halides are weak polar molecules. They exhibit dipole-dipole interactions because of their polar C—X bond, but because the rest of the molecule contains only C—C and C—H bonds, they are incapable of intermolecular hydrogen bonding. 2 The Polar Carbon-Halogen Bond The electronegative halogen atom in alkyl halides creates a polar C—X bond, making the carbon atom electron deficient. Electrostatic potential maps of four halomethanes (CH3X) 3  Nucleophile (Nucleophile = “seeks a nucleus” Nucleus = + charge) Lewis Bases – any species that has a lone pair of electrons. The electrons can be used to make a new bond to an electron deficient species. Nucleophilic substitution and elimination reactions Generally speaking, there are two things that can happen when a nucleophile ("Nu:-") encounters an alkyl halide: The replacement of one of the groups (leaving group, ) bonded to a carbon, by a electron- rich reagent, nucleophile, such as I- or HO- An electron-rich reagent, Nu, bonds to an H as HX is removed in a elimination reaction. Nucleophile can act as a base, inducing "dehydrohalogenation" of the alkyl halide and producing an alkene. 4  Alkyl Halides and Nucleophilic Substitution The Nucleophile: Nucleophiles and bases are structurally similar: both have a lone pair or a  bond. They differ in what they attack. 5 The Leaving Group (a review of basicity): There are periodic trends in leaving group ability: 6  The Leaving Group: Poor leaving groups for Nucleophilic Substitution Strong bases 7  The Leaving Group Good leaving groups for Nucleophilic Substitution Weak bases 8 General Features of Nucleophilic Substitution: Negatively charged nucleophiles like HO¯ and HS¯ are used as salts with Li+, Na+, or K+ counterions to balance the charge. Since the identity of the counterion is usually inconsequential, it is often omitted from the chemical equation. When a neutral nucleophile is used, the substitution product bears a positive charge. 9 The Nucleophile: Nucleophilicity parallels basicity in three instances: 1. For two nucleophiles with the same nucleophilic atom, the stronger base is the stronger nucleophile. The relative nucleophilicity of HO¯ and CH3COO¯, two oxygen nucleophiles, is determined by comparing the pKa values of their conjugate acids (H2O = 15.7, and CH3COOH = 4.8). HO¯ is a stronger base and stronger nucleophile than CH 3COO¯. 2. A negatively charged nucleophile is always a stronger nucleophile than its conjugate acid. HO¯ is a stronger base and stronger nucleophile than H 2O. 3. Right-to-left-across a row of the periodic table, nucleophilicity increases as basicity increases: 10  Common Nucleophiles: In the left box, all are strong nucleophiles except chloride and acetate which are medium. In the right box, HOH and ROH are weak, the others medium. 11  Solvent effect on the Nucleophile: Polar protic solvent has a hydrogen atom attached to a strongly electronegative element (e.g. oxygen) that forms hydrogen bonds. -Polar protic solvent solvate cations and anions effectively while aprotic solvents do not solvate anions to any appreciable extend. -Polar protic solvents are more suitable for SN1 reactions, while aprotic solvents are used for SN2 reactions Example of polar protic solvents 12  Polar aprotic solvents are those solvents whose molecules do not have a hydrogen atom that's attached to an atom of an electronegative element. Polar aprotic solvents also exhibit dipole—dipole interactions, but they have no O—H or N—H bonds. Thus, they are incapable of hydrogen bonding. Examples of polar aprotic solvents 13  In polar aprotic solvents, nucleophilicity parallels basicity, and the stronger base is the stronger nucleophile. Because basicity decreases as size increases down a column, nucleophilicity decreases as well. F highest nucleophilicity and I lowest 14  The Nucleophile: Nucleophilicity does not parallel basicity when steric hindrance becomes important. Steric hindrance is a decrease in reactivity resulting from the presence of bulky groups at the site of a reaction. Steric hindrance decreases nucleophilicity but not basicity. Sterically hindered bases that are poor nucleophiles are called nonnucleophilic bases. 15 Mechanisms of Nucleophilic Substitution: In a nucleophilic substitution: But what is the order of bond making and bond breaking? In theory, there are three possibilities. Bond making and bond breaking occur at the same time. In this scenario, the mechanism is comprised of one step. In such a bimolecular reaction, the rate depends upon the concentration of both reactants, that is, the rate equation is second order. 16 Mechanisms of Nucleophilic Substitution: Bond breaking occurs before bond making. In this scenario, the mechanism has two steps and a carbocation is formed as an intermediate. Because the first step is rate-determining, the rate depends on the concentration of RX only; that is, the rate equation is first order. 17 Mechanisms of Nucleophilic Substitution: Bond making occurs before bond breaking. This mechanism has an inherent problem. The intermediate generated in the first step has 10 electrons around carbon, violating the octet rule. Because two other mechanistic possibilities do not violate a fundamental rule, this last possibility can be disregarded. 18 SN1/E1 SN1 and E1 have identical rate determining steps, so they generally occur simultaneously and have the same properties. SN2 E2 19  Kinetics If two molecules must come together in order for a reaction to take place, then the rate at which that reaction occurs will depend on the concentrations of both of these species. If this reaction is the slowest step (i.e., the "rate-determining step") in a series of steps leading to an overall transformation, or if it is the only step in the reaction, then that reaction will exhibit "bimolecular" or "second-order" kinetics. Both the SN2 and E2 reactions exhibit bimolecular kinetics. That is, these reactions have "rate laws" that show the direct dependence of the reaction rate on the concentrations of both the alkyl halide and the nucleophile: rate = k[RX][Nu:-] SN1 and E1 reactions exhibit "unimolecular" kinetics , for which the rate depends only on the concentration of the alkyl halide, and not at all on the nucleophile. The different rate law for these reactions implies that they proceed by a different mechanism. 20  Mechanisms of Nucleophilic Substitution: SN2 reaction Kinetic data show that the rate of reaction depends on the concentration of both reactants, which suggests a bimolecular reaction with a one-step mechanism. This is an example of an SN2 (substitution nucleophilic bimolecular) mechanism. 21 examples of SN2 inversion of configuration: The Walden Inversion. 22 An energy diagram for the SN2 reaction: 23  The higher the Ea, the slower the reaction rate. Thus, any factor that increases Ea decreases the reaction rate. Two energy diagrams depicting the effect of steric hindrance in S N2 reactions 24 Mechanisms of Nucleophilic Substitution: Methyl and 1° alkyl halides undergo SN2 reactions with ease. 2° Alkyl halides react more slowly. 3° Alkyl halides do not undergo SN2 reactions. This order of reactivity can be explained by steric effects. Steric hindrance caused by bulky R groups makes nucleophilic attack from the backside more difficult, slowing the reaction rate. 25  All SN2 reactions proceed with backside attack of the nucleophile, resulting in inversion of configuration at a stereogenic center. Stereochemistry of the SN2 reaction 26 Factors influencing the rate of SN2 reactions There are four factors that influence the rate of SN2 reactions: 1. the substrate (alkyl halide) structure 2. the nucleophile 3. the leaving group 4. the solvent 27 Characteristics of SN2 reactions 28 Kinetic data show that the rate of reaction depends on the concentration of only the alkyl halide. This suggests a two-step mechanism in which the rate-determining step involves the alkyl halide only. This is an example of an SN1 (substitution nucleophilic unimolecular) mechanism. mechanism SN1 indicates a substitution, nucleophilic, unimolecular reaction, described by the expression rate = k [R-LG]. This implies that the rate determining step of the mechanism depends on the decomposition of a single molecular species. This pathway is a multi-step process with the following characteristics: step 1: slow loss of the leaving group, LG, to generate a carbocation intermediate, 29  The mechanism of an SN1 reaction would be drawn as follows: Note the curved arrow formalism that is used to show the flow of electrons. Key features of the SN1 mechanism are that it has two steps, and carbocations are formed as reactive intermediates. 30 Multi-step reactions have intermediates and a several transition states (TS). In an SN1 there is loss of the leaving group generates an intermediate carbocation which is then undergoes a rapid reaction with the nucleophile.. 31 An energy diagram for the SN1 reaction: 32 SN1 MECHANISM FOR REACTION OF ALCOHOLS WITH HBr Step 1: An acid/base reaction. Protonation of the alcoholic oxygen to make a better leaving group. This step is very fast and reversible. The lone pairs on the oxygen make it a Lewis base. Step 2: Cleavage of the C-O bond allows the loss of the good leaving group, a neutral water molecule, to give a carbocation intermediate. This is the rate determining step (bond breaking is endothermic) Step 3: Attack of the nucleophilic bromide ion on the electrophilic carbocation creates the alkyl bromide. 33 To understand the stereochemistry of the SN1 reaction, we must examine the geometry of the carbocation intermediate. The more highly substituted a carbocation is, the more stable it is. The more stable a carbocation is, the easier it is to form. 30 > 20 > 10 > methyl 34  Loss of the leaving group in Step generates a planar carbocation that is achiral. In Step , attack of the nucleophile can occur on either side to afford two products which are a pair of enantiomers. Because there is no preference for nucleophilic attack from either direction, an equal amount of the two enantiomers is formed called a racemic mixture. We say that racemization has occurred. (transformation of of optically active compound to a racemic mixture 35 components of the reaction influence the reaction pathway: R- Reactivity order : (CH3)3C- > (CH3)2CH- > CH3CH2- > CH3- In an SN1 reaction, the rate determining step is the loss of the leaving group to form the intermediate carbocation. The more stable the carbocation is, the easier it is to form, and the faster the SN1 reaction will be. Since a carbocation intermediate is formed, there is the possibility of rearrangements (e.g. 1,2- hydride or 1,2-alkyl shifts) to generate a more stable carbocation. This is usually indicated by a change in the position of the substituent or a change in the carbon skeleton of the product when compared to the starting material. -LG The only event in the rate determining step of the SN1 is breaking the C-LG bond. Therefore, there is a very strong dependence on the nature of the leaving group, the better the leaving, the faster the SN1 reaction will be. Nu Since the nucleophile is not involved in the rate determining step, the nature of the nucleophile is unimportant in an SN1 reaction. However, the more reactive the nucleophile, the more likely an SN2 reaction becomes. 36  Carbocation Stability: The order of carbocation stability can be rationalized through inductive effects and hyperconjugation. Inductive effects are electronic effects that occur through  bonds. Specifically, the inductive effect is the pull of electron density through  bonds caused by electronegativity differences between atoms. Alkyl groups are electron donating groups that stabilize a positive charge. Since an alkyl group has several  bonds, each containing electron density, it is more polarizable than a hydrogen atom, and better able to donate electron density. In general, the greater the number of alkyl groups attached to a carbon with a positive charge, the more stable will be the cation. 37  Carbocation Stability: The order of carbocation stability is also a consequence of hyperconjugation. Hyperconjugation is the spreading out of charge by the overlap of an empty p orbital with an adjacent  bond. This overlap (hyperconjugation) delocalizes the positive charge on the carbocation, spreading it over a larger volume, and this stabilizes the carbocation. Example: CH3+ cannot be stabilized by hyperconjugation, but (CH3)2CH+ can. 38  Carbocation Stability: The effect of the type of alkyl halide on SN1 reaction rates can be explained by considering carbocation stability. Carbocations are classified as primary (1°), secondary (2°), or tertiary (3°), based on the number of R groups bonded to the charged carbon atom. As the number of R groups increases, carbocation stability increases. 39 Carbocation Stability: 40 Characteristics of SN1 reactions 41 Substrate in predicting SN1 vs SN2 mechanisms: Four factors are relevant in predicting whether a given reaction is likely to proceed by an SN1 or an SN2 mechanism: The most important is the structure of the alkyl halide. 42  Nucleophile in predicting SN1 vs SN2 mechanisms: The strong nucleophile favors an SN2 mechanism. The weak nucleophile favors an SN1 mechanism. 43 Leaving Group in predicting SN1 vs SN2 mechanisms: The leaving group is the third factor. A better leaving group increases the rate of both SN1 and SN2 reactions. 44 Solvent in predicting SN1 vs SN2 mechanisms: The nature of the solvent is a fourth factor. Polar protic solvents like H2O and ROH favor SN1 reactions because the ionic intermediates (both cations and anions) are stabilized by solvation. Polar aprotic solvents favor SN2 reactions because nucleophiles are not well solvated, and therefore, are more nucleophilic. 45 Factors in predicting SN1 vs SN2 mechanisms: Nucleophile: SN1 Nucleophilic strength not important SN2 Needs a strong nucleophile Substrate: SN1 3o > 2o SN2 CH3 > 1o > 2o Solvent: SN1 Enhanced by more polar solvent SN2 Enhanced by less polar solvent Leaving Group: SN1 Good LG important to form C+ SN2 Not as important but enhances reaction 46 Results of SN1 vs SN2 mechanisms: Kinetics: SN1 rate = k[RX] SN2 rate = k[RX][Nu:] Stereochemistry: SN1 both inversion and retention (racemic) SN2 inversion only Rearrangements: SN1 rearrangements common SN2 rearrangements not possible 47