Medical Biotechnology: Advances & Insights

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Questions and Answers

How do advancements in biomolecular therapies, like recombinant proteins and stem cells, impact medical treatments?

They improve available medical treatments for a variety of conditions, including autoimmune diseases, inflammation, cancer, and infectious diseases.

What is the significance of the 'Harvard Mouse' in the history of medical biotechnology?

The 'Harvard Mouse' was the first mammal to be patented in the United States, marking a milestone in intellectual property rights for genetically modified organisms used in research.

How does genomic sequencing contribute to personalized medicine, particularly in cancer treatment?

Genomic sequencing helps in understanding genetic variations and identifying disease-causing genes, allowing for the development of personalized treatments tailored to an individual's genetic makeup.

In transcriptomics, what information does the mRNA profile from a single entity provide, and how does it differ from obtaining data from a collection of cells?

<p>Analyzing mRNA from a single entity informs scientists about the transcriptome heterogeneity of cells and helps them understand the origins and development of those cells, unlike data from a cell collection.</p>
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How does mass spectrometry contribute to advancing proteomics research, especially in the context of protein folding studies?

<p>Mass spectrometry allows for the separation, detection, and identification of proteins, enabling the study of protein folding in its native environment and evolving from <em>in vitro</em> to <em>in vivo</em> analysis in tissues.</p>
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How does combining microarray detection with mass spectrometry improve the accuracy and efficiency of protein identification?

<p>Combining microarray detection with mass spectrometry in dual detection chips enhances accuracy and efficiency by providing both <em>fluorescence readout</em> and direct MS analysis of proteins.</p>
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In the context of medical imaging, how do 3D and 4D imaging enhance visualization and diagnostic capabilities?

<p>3D imaging improves the visualization of complex anatomical structures, while 4D imaging adds the dimension of real-time movement, such as organ motion or fetal heartbeats, providing a more dynamic view.</p>
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How can AI and machine learning enhance early diagnosis in medical imaging?

<p>AI and machine learning can help with scan interpretation, abnormality detection, and predictive analytics, potentially enabling earlier diagnosis of conditions like tumors and fractures before they become visible to the human eye.</p>
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How do antimicrobial and antimicrobial agents differ in their mechanisms of action, and what types of microorganisms does each target?

<p>Antimicrobials prevent the growth and spread of microbes generally, while antimicrobial agents can be more specific; antibiotics target bacteria, antifungals target fungi, microbicidal agents kill microbes, and biostatic agents inhibit microbe growth.</p>
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How do live attenuated vaccines and inactivated vaccines differ in their approach to stimulate an immune response?

<p>Live attenuated vaccines use a weakened form of the pathogen to mimic a natural infection and trigger a strong, lasting immune response, while inactivated vaccines use dead pathogens that can't cause disease but still stimulate the body to recognize and fight the real germs later.</p>
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What are the advantages and disadvantages of using induced pluripotent stem cells (iPSCs) in stem cell technology?

<p>Advantages include avoiding histocompatibility issues and the ability to reprogram diseased tissues, while disadvantages include potentially unstable reproducibility and ethical concerns about altering human life.</p>
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How does stem cell research potentially benefit the treatment of neurodegenerative diseases?

<p>Stem cell research may offer new treatments for neurodegenerative diseases by providing better knowledge to replace damaged organs, reducing the risk of transplantation and finding treatments for birth defects and heart conditions.</p>
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Explain how both genetics, immunology, and biochemistry are used in regenerative medicine.

<p><em>Genetics</em> are useful for understanding the physiological mechanisms of stem cells; <em>immunology</em>, of understanding how these cells grow and die; and <em>biochemistry</em> to understand what makes stem cells change into other cells.</p>
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How has the discovery of RIPGBM impacted the study of cancer?

<p>RIPGBM selectively kills the stem-like cells that make glioblastoma brain cancers so deadly; the compound is highly selective, and powerfully suppresses the growth of GBM tumors.</p>
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What could studying how potential drugs effect embryonic stem cells tell us?

<p>Studying how potential drugs affect embryonic stem cell could provide a far more accurate prediction of a drug's potential toxicity than conventional animal models can.</p>
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What can the protein ID1 tell us about glioblastoma?

<p>If the protein ID1 is 'turned off' in lab models and human cells, the glioblastoma tumours slowed down and became less resistant to chemotherapy.</p>
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How does tissue differentiation help with the study of neurological research?

<p>Advances with induced pluripotent stem cells (iPSCs) have enabled modelling of human diseases with patient-derived neural cells; neural tissue can be observed in a model in order to identify differences.</p>
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How can 3D cell cultures help with the potential study of brain diseases?

<p>Three-dimensional (3D) in vitro cell and tissue culture models, particularly for the central nervous system, allow for the exploration of mechanisms of <em>organ development</em>, <em>cellular interactions</em>, and <em>disease progression</em> within defined environments.</p>
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What types of lung research are hPSCs useful for?

<p>LBOs are useful to study the branching process of the lung cells; this is typically done after xenotransplantation and in Matrigel 3D culture.</p>
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What do the Malacidins compounds do?

<p>This new type of antibiotic is found in soil.It works against drug-resistant bacteria (like MRSA) andhelps prevents antibiotic resistance.</p>
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Flashcards

What is medical biotechnology?

The application of biotechnology tools to produce medical products for the diagnosis, prevention, and treatment of diseases.

Importance of medical biotech advances?

Driven by the need for improved medical diagnosis and therapy for various diseases. Includes innovations like recombinant proteins and stem cells.

What is Genomics?

The study of the entire genome of an organism, including its DNA sequence, structure, function, evolution, and mapping.

Uses of Genomics?

To understand genetic variations, identify disease-causing genes, study evolutionary relationships, and develop personalized medicine.

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What is Transcriptomics?

The study of the transcriptome, the complete set of RNA transcripts produced by the genome under specific conditions.

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Uses of Transcriptomics?

Used to analyze gene expression patterns, understand cellular responses to diseases or treatments, and identify biomarkers.

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What is Proteomics?

The large-scale study of proteins, including their structures, functions, interactions, and expression levels in a biological system.

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Uses of Proteomics?

To investigate how proteins change in different diseases, find drug targets, and understand cellular processes at the protein level.

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What is Metabolomics?

Study of global metabolite profiles in a system under a given set of conditions to understand metabolic changes in diseases and effects of drugs.

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Single Cell Sequencing?

A type of sequencing that involves isolating a single cell, amplifying the whole genome, constructing sequencing libraries, and then applying next-generation sequencing.

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Nanopore Sequencing?

A portable handheld device for DNA and RNA sequencing based on the fact that each nucleotide has a different size and electrical properties.

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Mass Spectrometry (MS)?

Used for protein separation, detection, and identification is evolved from in vitro use to in vivo analysis in tissues and now studies protein folding in its native environment.

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What is Elastography?

Measures tissue stiffness to detect fibrosis, tumors, and liver disease and is often paired with ultrasound.

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What is Spit test

A non-invasive and quick test using saliva, Can detect Hormones, Genetic material, Infections, Cancer biomarkers.

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What are Antimicrobials?

Substances that prevent microbe growth, used widely to kill germs and ensure product longevity.

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Antibiotics

Medicines used against bacteria

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Antibiotic Resistance?

The ability of microorganisms and bacteria to resist antibiotics, leading to harder-to-treat infections and increased risks

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What is a Vaccine?

A biological preparation that provides active acquired immunity using weakened or killed forms of a microbe.

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Live Attenuated Vaccines

Vaccines that use a weakened version of the Real Virus or Bacteria, it cannot cause an illness for a healthy person

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Malacidins

New type of antibiotic found in soil, works against drug-resistant bacteria and helps prevent antibiotic resistance

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Study Notes

Medical Biotechnology Definition

  • Utilizes biotechnology tools to create medical products like cancer therapies and vaccines
  • Aids in diagnosis, prevention, and treatment of diseases

Importance of Medical Biotechnology Advances

  • Needed for enhanced medical diagnosis and therapies for various diseases
  • Includes autoimmune, inflammatory, cancer, and infectious diseases
  • Biomolecular therapies such as recombinant proteins, monoclonal antibodies, stem cells, and bioinspired materials enhance medical treatments

Historical Advancements in Medical Biotechnology

  • Significant changes in healthcare and medicine throughout history
  • Life expectancy increased by around 25 years (1914-2014)
  • Accomplishments such as repairing hearts, DNA mapping, and partial brain transplants are now commonplace

New Insights in Medical Biotechnology

  • Artificial Intelligence (AI)
  • Big Data
  • Gene Editing
  • Precision Medicine
  • Gene Sequencing
  • Biomanufacturing
  • Synthetic Biology
  • Bioprinting
  • Microfluids
  • Tissue Engineering

Omics Technologies Focus

  • Genomics studies genes and genetic variation
  • Transcriptomics studies RNA levels and gene activity
  • Proteomics studies protein expression, modifications, and interactions
  • Metabolomics studies metabolic processes and end products

Genomics

  • Focuses on DNA to understand genetic makeup and variations
  • Provides insight into the genetic potential of organisms
  • Achieved through DNA sequencing and PCR
  • Applications include mutation detection and personalized medicine

Transcriptomics

  • Focuses on mRNA and non-coding RNA to determine gene activity
  • Enables understanding of which genes are active and when
  • Analyzes RNA levels and gene activity
  • Uses RNA-seq, microarrays, and RT-qPCR techniques
  • Applications include gene expression profiling and disease biomarkers

Proteomics

  • Focuses on proteins and their structures, functions, and interactions
  • Provides insights into what proteins are made and their function
  • Achieved through mass spectrometry, 2D gels, and Western blot
  • Applications involve drug target discovery and understanding of disease mechanisms

Metabolomics

  • Focuses on the study of global metabolite profiles in a biological system under specific conditions
  • Reveals what biochemical reactions are occurring
  • Is highly dynamic and sensitive to environmental changes, depending on conditions
  • Uses NMR, LC-MS, and GC-MS techniques
  • Finds applications in disease diagnosis, studying nutrition, and understanding drug response

Advances in Omics Technologies

  • Moved from basic molecular analysis to high-throughput, high-resolution, single-cell-level investigations
  • Revolutionized the understanding of genes, RNA, proteins, and metabolites
  • Provided a deeper, more precise view of biology, disease, and personalized medicine

Technological Innovations in Omics

  • Third-generation sequencing
  • Single-cell sequencing isolates a single cell, amplifies its genome, and constructs sequencing libraries
  • Nanopore sequencing uses portable devices to sequence DNA and RNA based on nucleotide size and electrical properties

Advances in Transcriptomics

  • Enhanced understanding of mRNA profile from a single entity rather than a whole tissue
  • Yields information about the transcriptome heterogeneity and development origins of cells
  • Single-cell RNAseq sequences the entire transcriptome at the single-cell level

Technological Advances in Proteomics

  • Mass Spectrometry (MS) is used for protein separation, detection, and identification
  • Evolved from in vitro to in vivo
  • Protein Microarrays detect proteins at once using pre-known sequences, but limited to changes in protein structure after translation
  • Aptamer Arrays use DNA/RNA to bind proteins with high specificity for more effective drug screening, diagnostics, and target validation
  • Microarray with MS detection combines technologies to improve accuracy of protein identification

Medical Imaging

  • A technique and process of creating visual representations of the interior of a body for clinical analysis and medical intervention
  • Helps visually represent the function of organs and tissues

Medical Diagnosis

  • The process of determining which disease or condition explains a person's symptoms and signs
  • Relies on information from a medical history and physical examination

Projection Radiology (X-Rays)

  • Determines the type and extent of fractures, and detects lung pathology
  • Radio-opaque contrast media visualizes organ structure

Fluoroscopy

  • Real-time moving images of internal structures
  • Uses continuous X-ray input at a lower dose rate
  • Image receptor converts radiation into an image, displayed on a monitor

Computed Tomography (CT) Scan

  • Medical imaging using X-rays and digital computer technology
  • Creates detailed 2D or 3D images
  • Images every type of body structure, including bone, blood vessels, and soft tissue
  • Uses a gantry with a rotating X-ray source and detectors

Magnetic Resonance Imaging (MRI)

  • Uses powerful magnets to polarize and excite hydrogen atoms in water molecules
  • Spatial encoding produces detectable signals to form images of the body
  • Radio frequency (RF) pulse emitted and reconstructed into an image

Medical Ultrasonography

  • Uses high-frequency sound waves to produce images
  • Commonly used for fetal imaging, abdominal organs, heart, and blood vessels
  • Studies function in real-time, is inexpensive, and emits no ionizing radiation

Nuclear Medicine

  • Encompasses diagnostic imaging and treatment
  • Uses short-lived isotopes and energetic particles from radioactive material to diagnose or treat pathology
  • Assesses physiology, with applications in oncology, neurology, and cardiology

Types of Nuclear Medicine: SPECT

  • 3D tomographic technique using gamma camera data
  • Combined with CT scanner (SPECT-CT) for functional data localization
  • Patient injected with radioisotope emitting gamma rays detected by surrounding detectors

Position Emission Tomography (PET)

  • Uses coincidence detection to image functional processes
  • Short-lived positron-emitting isotope incorporated with organic substance marks metabolic utilization
  • Analyzes activity distribution for tumour, metastasis, or infection; PET can be done with CT (PET-CT) or MRI

Diagnostic Blood Tests

Full Blood Count (FBC)

  • Measures white blood cells, red blood cells, platelets, haematocrit, and hemoglobin
  • Detects blood cancers, clotting problems, immune issues, infections, and anemia

Kidney Test (Renal Profile)

  • Measures blood urea nitrogen, creatinine, sodium, potassium, and chloride
  • Assesses kidney function and signs of kidney failure

Liver Function Test

  • Protein levels of bilirubin and albumin
  • Globulin and liver enzymes are screened

Cholesterol Test (Lipid Profile)

  • Measures total cholesterol, HDL, LDL, risk ratio, and triglycerides

Blood Glucose Test

  • Indicates glucose levels

Antibodies Test

  • Identifies rheumatoid factor for rheumatoid arthritis, HIV, type I diabetes, and celiac disease

Cancer Test (Tumor Markers)

  • Detects and monitors cancer; examples: CA15-3 (breast), CA19-9 (gastrointestinal), CA-125 (ovarian), PSA (prostate), CEA (gastrointestinal)

Histopathology

  • Assesses tissue from biopsy
  • Stains are used to make cells visible for detecting abnormalities and diseases

Common Stains

  • Haematoxylin stains acidic structures (e.g., nucleus) a purplish blue
  • Eosin stains basic structures (e.g., cytoplasm) red or pink

Innovations in Imaging and Diagnostics

Speed & Processing Power

  • Use of GPUs for faster image rendering improves workflow and image quality

3D & 4D Imaging

  • 3D allows better visualization
  • 4D adds real-time movement

Point-of-Care Imaging

  • Portable and handheld devices are useful in critical care

Automation of Imaging Workflow

  • Vital in ultrasound
  • Reduces error and increases efficiency

AI & Machine Learning

  • Enhanced recognition for earlier diagnosis

Virtual and Augmented Reality

  • Helps with pre-surgery planning

Wearables

  • Ultrasound patches for disease monitoring

Multiparametric MRI (mpMRI)

  • Comprehensive images from multiple MRI techniques used for prostate cancer diagnosis

Angiography for Intraoperative Guidance

  • Real-time imaging used in surgery for accuracy

Elastography

  • Measures tissues, detects tumors

Spit Test

  • Used with saliva can detect hormones or disease

Antimicrobials

  • Prevent growth and spread of microbes
  • Used in hospitals, homes, and schools for disinfection
  • Antimicrobial agent is for drugs that stop or kill growth

Types of antimicrobial

  • Antibiotics (bacteria)
  • Antifungals (fungi)
  • microbicidal (kill)
  • biostatic (inhibit)
  • chemotherapy (treat)
  • prophylaxis (prevent)

Antibiotic Resistance

  • Microbes resist antibiotics, making infections harder to treat
  • Longer illness
  • Higher costs
  • Death risk

Vaccines

  • Contain agent that stimulates immune system
  • Body recognizes and destroys agent

Live Attenuated Vaccines

  • Use weak, but living virus
  • Causes illness, but is modified to prevent it
  • Creates long-lasting result

Inactivated Vaccines

  • Uses dead version of virus, body learns to fight
  • Polio, Typhoid, Rabies, Hep A

Immunization Program

  • Diphtheria
  • Tetanus
  • Pertussis
  • Polio
  • Measles
  • Mumps
  • Rubella
  • Varciella
  • Shingles

Antimicrobials

  • disinfectants ("nonselective" on surfaces)
  • antiseptics (tissues)
  • antibiotics (destroying in body)

Antibiotic Resistance

  • The ability of bacteria to resist killing by drugs

Advances in Preventing Antibiotic Resistance

  • Malacidins are a new type of antibiotic found in the soil that prevents antibiotic resistance

Using Artificial Intelligence in Drug Development

  • AI can predict new antibiotics
  • Helps to speed up the process of finding new drugs
  • Can design better treatments with less cost

Development of a Universal Flu Vaccine

  • Aims to protect against the flu

Ebola Vaccine

  • Can provide control for deadly outbreaks by effective stop Ebola spread

Covid-19 vaccines

  • Can respond quickly

Stem cells

  • Make more stem cells (self-renew)
  • Muscle, blood, nerve cells possible
  • Unspecialized that can turn into any

Advantages of stem cells

  • Treat disease
  • Repair organs

Disadvantages

  • Tumors possible
  • Ethical concerns

Types of Stem Cells

  • Pluripotent
  • iPSCs
  • Adult stem cells

Regenerative medicine

  • Applied to organ growth and self-repair â—¦ Principles: â—¦ -Understanding of stem cell structure â—¦ -How they grow and die â—¦ -What support needed

Drug development

  • Compound screening (Scripps finds compounds for brain cancer) â—¦ - Testing (Wisconsin-Madison reveals a new way to test drug toxicity) â—¦ -Target identification (Protein can help tumors) â—¦ -Disease models ï‚§ -Neural (Nervous issues growing problems) ï‚§ -Immunodeficiency (heterogeneous issues) â—¦ -3D tissue models

3D Human Tissue Models

  • Brain:
    • Three-dimensional (3D) in vitro cell and tissue culture models allow for the exploration of mechanisms of organ development, cellular interactions, and disease progression
  • Lungs: -Model to recapitulate fibrotic lung disease in vitro. and may provide a useful tool to model lung disease.

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