G-Coupled Receptor Signaling and Clinical Connections

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Questions and Answers

A receptor has an alteration that causes it to constitutively bind GTP. Which subunit of the G-protein is most likely affected?

  • GDP
  • Beta
  • Alpha (correct)
  • Gamma

A cell has a mutation that causes irreversible activation of adenylyl cyclase. What immediate downstream effect would be observed?

  • Hydrolysis of GTP bound to the alpha subunit
  • Activation of phospholipase C
  • Decreased levels of cAMP
  • Increased production of cAMP (correct)

In a G-coupled receptor signaling pathway, if protein kinase A (PKA) is not activated, which of the following upstream events is most likely to be inhibited?

  • DAG production
  • Calcium release
  • cAMP production (correct)
  • Receptor activation

A researcher is studying a G-protein coupled receptor pathway. They notice that CREB is not being phosphorylated. Which step would most directly lead to this observation?

<p>Failure of the active subunit of PKA to translocate to the nucleus. (B)</p> Signup and view all the answers

A patient is diagnosed with Alport syndrome involving altered type IV collagen. Which of the following cellular processes is most likely affected?

<p>Sensitivity to proteolytic enzymes (D)</p> Signup and view all the answers

A patient with Menkes disease exhibits reduced copper absorption. Which of the following subsequent conditions is most likely to arise?

<p>Impaired collagen function and hypermotility (D)</p> Signup and view all the answers

In Wilson's disease, toxic build-up of copper in tissues occurs. Which process is disrupted that leads to this outcome?

<p>Copper excretion from the liver (B)</p> Signup and view all the answers

A patient presents with symptoms of hemolytic anemia due to altered hemoglobin. Which disorder is most likely associated with these symptoms?

<p>Beta-Thalassemia (B)</p> Signup and view all the answers

What enzymatic activity directly incorporates iron into protoporphyrin IX during heme synthesis?

<p>Ferrochelatase (A)</p> Signup and view all the answers

Which of the following is a key substrate required for the initial step of heme synthesis?

<p>Succinyl CoA (A)</p> Signup and view all the answers

During heme synthesis, decarboxylation reactions are essential. After which transformation do those decarboxylation reaction occur?

<p>After ring formation with steps occurring in both the cytosol and mitochondrion. (B)</p> Signup and view all the answers

Heme biosynthesis is tightly regulated. Under normal physiological conditions, where does the primary regulation of heme synthesis occur?

<p>Via feedback inhibition of ALA synthase by heme (C)</p> Signup and view all the answers

Which function is associated with calcium ions ($Ca^{2+}$) in cellular processes?

<p>Diffusion correlated with activation of nitric oxide synthase (NOS) (C)</p> Signup and view all the answers

Superoxide dismutases are a class of enzymes that require a specific ion for activation. Which ion fulfills this role?

<p>Iron ($Fe$) (D)</p> Signup and view all the answers

The transport of glucose into cells via SGLT1 transporters is indirectly linked to the movement of a specific ion. Which ion is this interaction associated with?

<p>Potassium (A)</p> Signup and view all the answers

Which ion is capable of generating hydroxyl radicals ($HO \cdot$) when it reacts with hydrogen peroxide ($H_2O_2$)?

<p>Zinc ($Zn$) (C)</p> Signup and view all the answers

Which of the listed enzymes are directly involved in the production of NADPH within the pentose phosphate pathway?

<p>Glucose-6-phosphate dehydrogenase and 6-phosphogluconate dehydrogenase (A)</p> Signup and view all the answers

A researcher inhibits transketolase and transaldolase in cells undergoing the pentose phosphate pathway. What is the most direct consequence?

<p>Impaired interconversion of sugars (C)</p> Signup and view all the answers

The pentose phosphate pathway is considered irreversible at certain enzymatic steps. Which action causes this irreversibility?

<p>The generation of ribulose-5-phosphate. (C)</p> Signup and view all the answers

Considering the main functions of the pentose phosphate pathway, in which cellular location would you expect this pathway to be most active?

<p>Cytosol (B)</p> Signup and view all the answers

How does an increase in the proportion of unsaturated phospholipids typically affect membrane fluidity at a constant temperature?

<p>Increases membrane fluidity (A)</p> Signup and view all the answers

A cell increases the amount of cholesterol in its membrane. How would this change affect the stabilization of cellular integrity?

<p>Stabilization may increase or decrease depending on temperature and initial membrane composition. (D)</p> Signup and view all the answers

What is the primary mechanism by which ionophores facilitate ion movement across cellular membranes?

<p>Formation of a channel or pore to facilitate diffusion (B)</p> Signup and view all the answers

What is the primary purpose of establishing and maintaining concentration gradients across a semipermeable membrane in cells?

<p>To enable specific transport processes like symport activity. (A)</p> Signup and view all the answers

What is the most direct mechanism by which cells can increase signaling intensity at the cellular membrane?

<p>Facilitating organization of receptors in lipid rafts. (D)</p> Signup and view all the answers

Which type of transport is characterized by its ability to move molecules against their electrochemical gradient?

<p>Active transport (A)</p> Signup and view all the answers

Which property is specific only to simple diffusion when compared to facilitated diffusion and active transport?

<p>Exclusive transport of very specific molecules like $O_2$ and $CO_2$ (D)</p> Signup and view all the answers

What primarily determines the rate of facilitated diffusion across a cell membrane?

<p>Capabilities of the transporter (C)</p> Signup and view all the answers

Which of the following molecules has the highest affinity for oxygen?

<p>Myoglobin (B)</p> Signup and view all the answers

Under anaerobic conditions with energy needs in the muscle tissue, what change would occur to the oxygen affinity of myoglobin?

<p>Decrease to facilitate oxygen release (D)</p> Signup and view all the answers

Which combination of conditions would most effectively decrease the oxygen affinity of hemoglobin?

<p>Low pH, high $CO_2$, high 2,3-BPG (A)</p> Signup and view all the answers

Which of the following is a characteristic unique to primary active transport?

<p>It requires ATP hydrolysis (C)</p> Signup and view all the answers

P-ATPases are a group of ATP-driven pumps involved in ion transport. What distinguishes P-ATPases from other types of ATPases?

<p>They form phosphorylated intermediates during the transport process. (A)</p> Signup and view all the answers

ABC transporters are implicated in multidrug resistance in cancer cells. What is the primary function disrupted when these transporters malfunction?

<p>Excretion of harmful substance (C)</p> Signup and view all the answers

Which structural feature is most critical for the stability of the collagen alpha helix?

<p>Glycine residues (B)</p> Signup and view all the answers

What role do proline residues play in protein structure?

<p>Introducing bends or kinks in the polypeptide chain (C)</p> Signup and view all the answers

Which amino acids are most likely involved in post-translational modification by phosphorylation?

<p>Tyrosine, serine, and threonine (D)</p> Signup and view all the answers

Which enzyme initiates the ubiquitination process by binding to and activating ubiquitin?

<p>E1 activating enzyme (A)</p> Signup and view all the answers

During ubiquitination, which enzyme is responsible for transferring ubiquitin from the E2 enzyme to the target protein?

<p>E3 ubiquitin ligase (B)</p> Signup and view all the answers

What is the role of deubiquitylating enzymes (DUBs) in the ubiquitin-proteasome system?

<p>To remove ubiquitin from proteins (D)</p> Signup and view all the answers

For a protein to be degraded by the proteasome, what event is essential for the proteasome to interact and cleave?

<p>The protein must be unfolded or denatured. (C)</p> Signup and view all the answers

A patient presents with symptoms of glucose-galactose malabsorption. Which of the following processes is most likely affected?

<p>SGLT-1 mediated transport (A)</p> Signup and view all the answers

A patient with Duchenne muscular dystrophy has impaired muscle function. Which alteration is most likely associated with this condition?

<p>Problems with dystrophin. (C)</p> Signup and view all the answers

A patient presents with reactive oxygen species that impact the endothelium and reperfusion with inflammation. Which condition causes this presentation?

<p>Sickle Cell Anemia (B)</p> Signup and view all the answers

A patient is diagnosed with Bullous Pemphigoid and has had an increase of cAMP. Which alteration would be most directly related?

<p>Increase in cAMP levels due to loss of subunit activity (B)</p> Signup and view all the answers

Flashcards

GTP Binding Receptor

A receptor alteration that constitutively binds GTP, affecting the alpha subunit.

Downstream Consequence

Adenylate cyclase change; leading to irreversible consequences downstream due to continuous activation

G-coupled Receptor Signaling

CREB; transcription factors that can be altered by the activation of PKA, PKC, etc.

Ferrochelatase Activity

The final step to generate functional heme?

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5-ALA synthase

Enzymes that makes 5-ALA

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Porphobilinogen synthase

Enzymes that makes porphobilinogen

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Key substrates of Porphyrin Synthesis

Succinyl CoA and Glycine

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Key Steps in Heme Synthesis

Decarboxylation after ring formation, requiring transition to mitochondrion

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Regulation of Heme Synthesis

Suppressing activity of 5-ALA synthase (initial enzyme in heme synthesis pathway)

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Calcium's Role

Correlation with activation of NOS

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Role of Iron

Activation of superoxide dismutases

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Role of Sodium

Binds oxygen in heme

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Role of Zinc

Generating hydroxyl radicals when reacts with hydrogen peroxide.

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Role of Copper

The final step to generate functional heme?

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Enzymes for NADPH

6-phosphogluconate dehydrogenase and transketolase

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Why Pentose Phosphate?

Conversion of ribulose 5-phosphate for glycolysis

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More Unsaturated Phospholipids

Membrane fluidity is increased.

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Ionophore Function

Increase ion movement across membranes; essentially create a channel/pore

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Concentration Gradients

Gradient that allows ions naturally diffuse along and bring material to the desired location via symport activity

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Diffusion

The type of transport that relies directly on ion concentration

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Active Transport

Requires energy

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Oxygen Affinity?

Myoglobin has a higher affinity

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Decrease Myoglobin Affinity

Anerobic, Increased lactic acid, Low O2 levels

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Decrease Hemoglobin Affinity

Low pH, Increased/High CO2, Increased/High 2,3-BPG

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Active Transport

High energy bonds (i.e. ATP)

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Secondary Active Transport

Coupled with electrochemical gradients

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Amino Acids - Lysines

Lysines assist is crosslinking

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Amino Acids - Valines

Weak hydrophobic allows flexibility

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Amino Acids - Prolines

Provide bends especially in collagen

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Amino Acids - Glycines

Necessary for collagen alpha stability

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Amino Acids - Cysteines

Sulfhydryl groups and disulfide bonds

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Amino Acids - Ser, Thr & Tyr

Can be phosphorylated

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Function of E1

Initiates process

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Function of E2

Holds onto ubiquitin

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Function of E3

Transfers ubiquitin

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Function of DUB

Removes ubiquitin for reuse

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Nitric Oxide Synthesis

Directly produced by nitric oxide synthase.

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Reactive Nitrogen Importance

Inflammation, phagocytosis, and immune response

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Reperfusion Issue

Influx of O2 causes ROS production and inflammation

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Study Notes

G-Coupled Receptor Signaling

  • A receptor alteration that constitutively binds GTP affects the alpha subunit.
  • The immediate downstream consequence is a change in Adenylate cyclase that is irreversible.
  • The final downstream component of G-coupled receptor signaling is CREB Transcription.
  • If CREB transcription activation following receptor activation is not activated, possible alterations include:
    • PKC: DAG or Calcium release
    • PKA: cAMP
    • Alpha subunit: Receptor activation
    • CREB: Failure to translocate active subunit or PKA to nucleus; failure to phosphorylate CREB, or activate PKA.

Big Picture Clinical Connections

  • Alport Syndrome involves altered type IV collagen which increases sensitivity to proteolytic enzymes.
  • Beta-Thalassemia involves altered hemoglobin and increased probability of hemolytic anemia.
  • Ehler's-Danlos Syndrome involves impaired collagen function and unstable collagen with hypermotility
  • Menkes disease involves reduced copper absorption by the liver.
  • Muscular Dystrophy involves impaired association of laminins and collagen.
  • Parkinson's Disease has toxic build-up of copper.
  • Wilson's Disease involves lipid metabolism and elevated sphingomyelin.

Heme Synthesis

  • The final step to generate functional heme involves ferrochelatase activity and iron incorporation.
  • Enzymes involved are synthase and synthase.
  • 5-ALA synthase makes 5-ALA
  • Key substrates are Succinyl CoA and Glycine
  • Decarboxylation is seen after ring formation in both the cytosol and during transition into the mitochondrion.
  • Common regulation points affect the activity of 5-ALA synthase; heme suppresses its activity

Wonderful World of Ions

  • Diffussion to the cytoplasm is correlated with activation of NOS for Calcium.
  • Diffusion to the cytoplasm via SGLT1 is correlated with glucose symport activity for Potassium.
  • Copper is pumped into cells from outside via an anti-port pump system requiring energy.
  • Iron is required for activation of some superoxide dismutases.
  • Sodium binds oxygen in heme.
  • Zinc is capable of generating a hydroxyl radical when reacting with hydrogen peroxide.

Pentose Phosphate Pathway

  • Necessary enzymes for NADPH production include 6-phosphogluconate dehydrogenase.
  • The step where Ribulose 5-phosphate is generated is considered irreversible.
  • Because energetics favor progression over reversal the reversible enzymes are considered bidirectional.
  • It should be expected that cells needing energy and necessary sugars for glycolysis use this pathway.

Causes and Consequences Membrane Edition

  • More Cholesterol decreases fluidity.
  • Less Cholesterol increases fluidity.
  • More unsaturated phospholipids increase fluidity.
  • More saturated phospholipids decrease fluidity.
  • Changes in fluidity can increase or decrease stabilization; however stabilization is about cellular integrity not membrane integrity

Pumps, Channels, and more

  • Ionophores are chemicals which spontaneously associate with membranes and act in both facilitated diffusion and increase ion movement across membranes, essentially creating a channel and/or pore.
  • Concentration gradients across a semipermeable membrane creates a gradient so ions can naturally diffuse and bring material to the desired location via symport activity and enable natural diffusion through channels or proteins that can carry out enzymatic activity.
  • Ways to increase signaling intensity or the probability are, the organization of receptors in lipid rafts which ensure membrane movement of the raft to the proper location and enable organization in lipid rafts to enhance dimerization; receptor activation.

Kinetics And Transport

  • Diffusion is used only for very specific molecules, including O2 and CO2.
  • Facilitated diffusion can mobilize other molecules without direct energy input and rate can be increased/decreased directly due to ion concentration and rate is also determined by capabilities of the transporter.
  • Active transport works against ion electrochemical gradient, requires energy, and the rate is determined by energy availability and transporter capabilities.

Oxygen Affinity

  • Myoglobin has a higher affinity for oxygen.
  • Anerobic conditions with energy needs and increased lactic acid production; low O2 levels decreases oxygen for myoglobin
  • Low pH, increased/high hydrogen; increased/high CO2; increased/high 2,3-BPG decreases oxygen affinity for hemoglobin.
  • Changing all of the above decreases oxygen affinity most efficiently because the effects on oxygen affinity are additive

Active Transport

  • Requires energy either as a result of high energy bonds like ATP or as a coupling result of electrochemical gradients
  • ATPases are pumps that use ATP in order to drive ion movement
  • F-ATPase is a coupling factor.
  • V-type is vacuolar.
  • P-ATPases are phosphorylated intermediates.
  • Some active transport includes ATP-binding cassette(ABC) transporters which play a role in multi-drug resistance in cancer when overexpressed and when malfuntions are associate with dsieases such cystic fibrosis.

Amino Acids and More...

  • Lysines are involved in collagen and elastin crosslinking.
  • Valines have weak hydrophobic interactions allowing for flexibility in elastin.
  • Prolines provide bends, especially in collagen.
  • Glycines is necessary for collagen alpha helix stability.
  • Cysteines have sulfhydryl groups, disulfide bonds, likely important in laminins.
  • Tyrosines, Serine and Threonines undergo phosphorylation.

Protein Degradation And Proteolysis

  • E1 activates an enzyme and initiates the entire process.
  • E2 Ubiquitin Enzyme with hold the Ubiquitin for attachment to the target.
  • E3 is the ligase that delivers/targets ubiquitin from E2 to the target.
  • DUB is a deubiquitylating enzyme which removes Ubiquitin for reuse before degradation.
  • Regulatory particle function is recognition of the ubiquitylated target and denaturation of folded proteins so it and can be cleaved properly and proteases degrade the denatured proteins

Big Picture Clinical Connections 2

  • Glucose-galactose malabsorption involves alteration to SGLT-1 and the ability of intestinal epithelial cells to absorb glucose.
  • Diabetes and vascular injury changes glycine of collagen and correlated increases risk with high fracture rate.
  • Unstable hemoglobin causes potential jaundice and pigmented urine.
  • Osteogenesis Imperfecta is correlated with changes in glycine pf collagen and correlated increases risk with high fracture rate
  • Duchenne is correlated with impaired association of due to dystrophin.
  • Proteus syndrome is due to overgrowth from acquired mutations in AKT.
  • Sickle Cell Anemia involves altered hemoglobin with altered cellular shape.

Reactive Oxygen SPECIES

  • Superoxide, hydrogen peroxide and hydroxyl radical are the 3 ROS
  • Haber Weiss and Fenton, and metal-catalyzed Haber Weiss are the reactions providing the hydroxyl radical.
  • Superoxide and hydrogen peroxide are both are common precursors to the hydroxyl radical.

Big Picture Connections 3

  • Pertussis toxin increases cAMP levels due to increased activity; stimulation of adenylate Cyclase.
  • Cholera toxin increases cAMP levels to due to loss of activity of alpha subunits.
  • Loss of fatty acid synthase activity aids the prevention of progression into S phase.
  • Marfan Syndrome Fibrillin has alterations decreasing integrity elastins.
  • Bullous Pemphigoid disrupts hemidesmosomes as a result of disruption of hemidesmosomes and blistering are common
  • Junctional epidermolysis bullosa is associated laminin and scarring.

Ions and Channels

  • When pump is inactive:

    • The Potassium is in cytoplasm
    • The Sodium is ECM/Outside Cell
    • The Calcium is in cytoplasm
  • Once pump is active:

    • The Potassium is in ECM/Outside Cell
    • The Sodium is in Cytoplasm
    • The Calcium is in ECM/Outside Cell
    • The newly pumped sodium can drive glucose with them

Cellular Regulation

  • Hyperphosphorylation Rb
  • Activation of E2F dependent transcription
  • Increased activity of CDK2/increased kinase activity to drive toward S
  • Fatty acids synthase activity/fatty acid synthesis

Reactive Oxygen Species Again

  • Reactive nitrogen species includes nitric oxide produced directly by nitric oxide synthase.
  • Reactive nitrogen species are important for inflammation, pagocytosis, immune response.
  • Reperfusion after an ischemic event is a problem because it causes an influx that production (ROS causes).
  • Reperfusion promotes inflammation and creates vicious cycle of damage

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