Adverse Drug Reactions: Intrinsic and Idiosyncratic
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Questions and Answers

Which of the following is a characteristic of Type A adverse drug reactions?

  • They are often unrelated to the drug dose.
  • They are unpredictable based on drug concentrations.
  • They are less common than idiosyncratic reactions.
  • They are predictable based on drug concentrations. (correct)

Idiosyncratic adverse drug reactions are easily studied due to their high frequency in the general population.

False (B)

What type of surveillance is critical for detecting idiosyncratic adverse drug reactions (ADRs) that are normally not detected before a drug is licensed?

Post-marketing

The adverse reaction from Abacavir can cause ______ hypersensitivity syndrome (AHS).

<p>abacavir</p> Signup and view all the answers

What is the significance of HLA-B*57:01 allele in the context of abacavir treatment?

<p>Up to 100% of abacavir hypersensitivity cases show this allele, indicating increased hypersensitivity. (B)</p> Signup and view all the answers

Rechallenge with abacavir after a hypersensitivity reaction typically results in a less severe reaction.

<p>False (B)</p> Signup and view all the answers

Which HLA haplotype was found to have a 78% frequency in abacavir hypersensitive patients in the Mallal study?

<p>HLA-B*57:01</p> Signup and view all the answers

Activated abacavir binds directly to the ______ gene product, leading to an inappropriate recognition of 'self-peptides'.

<p>B*57:01</p> Signup and view all the answers

Prior to initiating abacavir treatment, what type of testing is recommended by the FDA?

<p>B*57:01 genotyping (A)</p> Signup and view all the answers

Covalent binding is involved in the mechanism of abacavir hypersensitivity.

<p>False (B)</p> Signup and view all the answers

Besides epilepsy, what other condition is carbamazepine (CBZ) used to treat?

<p>Bipolar disorder</p> Signup and view all the answers

Carbamazepine (CBZ) is associated with severe cutaneous adverse drug reactions, including Steven Johnson Syndrome and ______ Epidermal Necrolysis (TEN).

<p>toxic</p> Signup and view all the answers

Which HLA allele is strongly linked to Stevens-Johnson Syndrome (SJS)/Toxic Epidermal Necrolysis (TEN) in individuals of East Asian and Southeast Asian descent when taking carbamazepine?

<p>B*15:02 (D)</p> Signup and view all the answers

Screening for HLA-B*15:02 is mandatory for all populations before prescribing carbamazepine.

<p>False (B)</p> Signup and view all the answers

Which HLA allele has a demonstrated role in Europeans and Japanese populations displaying carbamazepine-induced skin rashes?

<p>HLA-A*31:01</p> Signup and view all the answers

Chinese patients with Stevens-Johnson Syndrome (SJS) or related reactions due to allopurinol are often positive for HLA-______.

<p>B*58:01</p> Signup and view all the answers

What is the effect size of allopurinol sufficient to justify genotyping in European populations?

<p>Not sufficient to justify (B)</p> Signup and view all the answers

The association between phenytoin-induced SJS/TEN and HLA-B*15:02 is as strong as that seen with carbamazepine.

<p>False (B)</p> Signup and view all the answers

What enzyme polymorphism implicates a slower metabolism of phenytoin, thereby predisposing patients to serious skin reactions?

<p>CYP2C9*3</p> Signup and view all the answers

For patients testing positive for HLA-B*15:02, alternative anti-epileptic drugs such as lamotrigine, levetiracetam, or ______ should be considered.

<p>valproate</p> Signup and view all the answers

Pharmacogenetic screening for HLA-B57:01 and HLA-B15:02/HLA-A*31:01 improves drug safety by:

<p>Reducing hypersensitivity reactions. (B)</p> Signup and view all the answers

Drug-induced liver injury (DILI) is a common adverse drug reaction.

<p>False (B)</p> Signup and view all the answers

According to a US based study mentioned in these texts, DILI accounted for what percentage of all hospital admissions due to severe liver injury?

<p>20%</p> Signup and view all the answers

The HLA class 1 allele A*______ is a risk-factor for DILI relating to both terbinafine and ticlopidine.

<p>33:01</p> Signup and view all the answers

What increase in the rate of DILI development is reportedly associated with HLA-B*5701?

<p>80-fold (C)</p> Signup and view all the answers

Hepatotoxicity with ticlopidine appears more common in Europeans than in Japanese patients.

<p>False (B)</p> Signup and view all the answers

How many weeks after drug treatment does DILI typically develop, indicating that multiple factors are involved?

<p>several</p> Signup and view all the answers

Flucloxacillin is a beta-lactamase resistant ______ with an isoxazolyl ring.

<p>penicillin</p> Signup and view all the answers

In GWAS on flucloxacillin DILI, which genomic region displayed the strongest signal?

<p>MHC region (B)</p> Signup and view all the answers

The sensitivity and specificity of B*57:01 genotyping as a predictor is higher for flucloxacillin DILI than for abacavir hypersensitivity.

<p>False (B)</p> Signup and view all the answers

Besides HLA-B*57:01, genetic studies implicated what gene encoding ST6 B-galactosamide-a-2,6-sialyltransferase in flucloxacillin-related DILI?

<p>ST6GAL1</p> Signup and view all the answers

Amoxicillin, a penicillin with a B-lactamase inhibitor, has DILI associations with DRB1*______ in GWAS studies.

<p>15:01</p> Signup and view all the answers

For HLA and related gene associations with DILI, what is the underlying mechanism when proteins interact with the drug?

<p>Specific HLA protein interacts with drug complex to peptide inappropriately and presents this to T cells causing reaction (C)</p> Signup and view all the answers

Statin myopathy always results in life-threatening rhabdomyolysis.

<p>False (B)</p> Signup and view all the answers

What variant of SLOC1B1 is associated with decreased hepatic uptake of simvastatin?

<p>*5</p> Signup and view all the answers

The SLOC1B1 gene encodes the main inward ______ statin transporter.

<p>hepatic</p> Signup and view all the answers

What is the likely cause of muscle toxicity in patients with the SLOC1B1*5 variant?

<p>Higher plasma level causes greater than normal uptake from the transporter (B)</p> Signup and view all the answers

GWAS have not been used to detect genes related to diseases.

<p>False (B)</p> Signup and view all the answers

What percentage of patients typically display a positive response to the main current treatment of Hepatitis C virus involving interferon-a and ribavirin?

<p>50%</p> Signup and view all the answers

A polymorphism in the ______ gene gave the strongest effect on GWAS in a study on biphosphate-induced osteonecrosis of the jaw.

<p>CYP2C8</p> Signup and view all the answers

What is the most common mechanism by which drugs prolong cardiac repolarization, potentially leading to serious adverse reactions?

<p>Blockage of outward ion channels (A)</p> Signup and view all the answers

Polymorphisms in ion channels completely explain drug-induced long QT syndrome.

<p>False (B)</p> Signup and view all the answers

What is the name of protein that is regulated by the NOS1AP gene that may contribute to diQLTs.

<p>Nitric oxide synthase 1 activating protein</p> Signup and view all the answers

Which of the following is a characteristic of idiosyncratic (Type B) adverse drug reactions?

<p>Not usually dose-related (B)</p> Signup and view all the answers

HLA class 1 genes primarily present exogenous antigens to CD4+ helper T cells.

<p>False (B)</p> Signup and view all the answers

What type of immune-mediated reaction can abacavir hypersensitivity cause, potentially endangering a patient's life?

<p>abacavir hypersensitivity syndrome</p> Signup and view all the answers

Patients testing positive for the HLA-B*57:01 allele should receive an alternative ______ instead of abacavir.

<p>NRTI</p> Signup and view all the answers

Match the following drugs with the HLA allele associated with their adverse reactions:

<p>Abacavir = HLA-B<em>57:01 Carbamazepine = HLA-B</em>15:02 Allopurinol = HLA-B<em>58:01 Flucloxacillin = HLA-B</em>57:01</p> Signup and view all the answers

Which of the following best describes the mechanism by which abacavir can trigger a hypersensitivity reaction?

<p>Abacavir binds to the B*57:01 gene product, leading to incorrect recognition of self-peptides as foreign, triggering an immune response. (B)</p> Signup and view all the answers

Screening for HLA-B*15:02 is universally required before prescribing carbamazepine, regardless of the patient's ethnicity.

<p>False (B)</p> Signup and view all the answers

What is the term for widespread rash resulting in significant fluid loss, potentially linked to carbamazepine use and associated with HLA-B*15:02?

<p>Steven-Johnson Syndrome</p> Signup and view all the answers

A variant of the NOS1AP gene, RS10494366, has been shown to potentiate the QT prolongation effects of ______.

<p>Verapamil</p> Signup and view all the answers

GWAS (genome-wide association studies) have shown that the SLOC1B1*5 allele is strongly associated with myopathy when using which medication?

<p>Simvastatin (B)</p> Signup and view all the answers

Flashcards

Type A (Intrinsic) Adverse Reactions

Predictable reactions based on drug concentrations; often linked to metabolism or transport polymorphisms. More common than Type B.

Type B (Idiosyncratic) Adverse Reactions

Unusual or exaggerated responses to drugs, rare and not easily predicted. Can be very serious.

Idiosyncratic ADR Characteristics

Adverse drug reactions that are not predictable based on pharmacology, are usually rare, and are often detected post-licensing.

Idiosyncratic ADR Examples (with Pharmacogenetics)

Skin rash (abacavir, carbamazepine, allopurinol), hepatotoxicity (flucloxacillin), myopathy (statins), cardiotoxicity.

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Antigen Presentation

Process by which antigen presenting cells display antigens to T-cells, leading to T-cell maturation. Critical in triggering immune responses.

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HLA Class Functions

Class 1: expressed on most cells, presenting endogenous antigens to CD8+ cytotoxic T cells. Class 2: on APCs, presenting exogenous antigens to CD4+ helper T cells.

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Abacavir

Widely used NRTI for HIV treatment. Can cause hypersensitivity reactions in ~5% of patients.

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Abacavir Hypersensitivity Syndrome (AHS)

A potentially life-threatening, immune-mediated reaction that can occur in response to Abacavir.

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HLA-B*57:01

The HLA allele strongly associated with abacavir hypersensitivity. Screening is required prior to abacavir treatment.

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Mechanism of Abacavir Hypersensitivity

Abacavir binds to B*57:01, changing protein shape. This leads to incorrect recognition of self-peptides as foreign by the immune system.

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Carbamazepine (CBZ)

Anti-epileptic drug linked to severe cutaneous adverse reactions (cADRs) like SJS/TEN.

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Steven-Johnson Syndrome (SJS)

Severe widespread rash with significant fluid loss, linked to carbamazepine

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HLA-B*15:02

An HLA allele strongly linked to SJS/TEN in individuals of East Asian descent and South East Asian descent when taking carbamazepine.

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HLA-B*15:02 mechanism with Carbamazepine

Carbamazepine interacts with this molecule leading to T-cell activation and skin necrosis.

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HLA-A*31:01

An HLA allele for which testing is recommended in some populations before prescribing carbamazepine.

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Allopurinol

A drug used for gout and hyperuricemia, associated with SJS/TEN, particularly in those of East Asian descent (linked to HLA-B*58:01).

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Phenytoin

Aromatic anticonvulsant associated with a high risk of SCAR (severe cutaneous adverse reactions).

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Pharmacogenetic Screening Benefits

Genetic testing improves drug safety. Ensures personalized medicine, minimizing severe adverse effects.

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Drug-Induced Liver Injury (DILI)

A rare but serious idiosyncratic toxicity that can result in hospitalization and liver transplantation.

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HLA-A*33:01

HLA Class 1 allele, a risk factor for DILI relating to both terbinafine & ticlopidine and other drugs.

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HLA-B*57:01 and Flucloxacillin

Associated with an 80-fold increased risk of DILI development with Flucloxacillin

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Flucloxacillin

Beta-lactamase resistant penicillin that is a well-established cause of liver injury (DILI).

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HCP5

SNP in this that tags HLA-B*57:01, associated with flucloxacillin DILI

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ST6GAL1

Encodes ST6 B-galactosamide-a-2,6-sialyltransferase, which may have a role in B-cell immune responses, possibly related to DILI.

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Statin Myopathy

ranges from mild to life-threatening rhabdomyolysis. SLOC1B1 variant associated with decreased hepatic uptake

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SLOC1B1*5 (Val174Ala)

Risk allele associated with higher levels of statin in circulation, potentially causing muscle toxicity.

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D85N

A KCNE1 polymorphism, encodes for voltage gated potassium channel, more common in individuals who have suffered drug-induced QT prolongation

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IL-28B (interferon gamma-3)

Predicts response to interferon-a and ribavirin treatment

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CYP2C8 polymorphism

Polymorphism that gave the strongest effect on GWAS in a study on biphosphate-induced osteonecrosis of the jaw

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Drug Prolong Cardiac Repolarisation

Blockage of outward ion channel with K channels the most important in cardiac muscle

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NOS1AP gene

Affect length of QT interval as it regulates intracellular Calcium levels

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Study Notes

Adverse Reactions

  • Intrinsic (Type A) reactions are predictable based on drug concentrations and are more common than idiosyncratic reactions.
  • Type A reactions are often linked to polymorphisms affecting drug metabolism or transport.
  • Examples of Type A reactions include bleeding due to warfarin dosage and liver toxicity from paracetamol overdose.
  • Idiosyncratic (Type B) reactions are unusual or exaggerated responses to drugs in a few individuals and are difficult to study due to their rarity.
  • Type B reactions can have serious or fatal consequences for patients.
  • Idiosyncratic reactions affect approximately 1 in 1,000 people.
  • Type B reactions are not predictable based on known drug pharmacology and not usually dose-related.
  • Examples of idiosyncratic reactions include liver toxicity from various drugs at recommended doses and cardiotoxicity.

Details of Idiosyncratic Adverse Drug Reactions

  • Idiosyncratic ADRs are not predictable based on known pharmacology.
  • Drug concentration may contribute, but it isn't the primary cause.
  • These reactions are typically rare, occurring in 1 in 10,000 to 100,000 patients exposed to the drug
  • Idiosyncratic ADRs are usually not detected before a drug is licensed.
  • Post-marketing surveillance is crucial for detection.
  • A relatively large number of widely used drugs are linked to these reactions.
  • Older drugs are less likely to be subject to regulatory action.
  • Examples of Idiosyncratic ADRs with pharmacogenetic findings include hypersensitivity/skin rash, hepatotoxicity, myopathy and cardiotoxicity.
    • Hypersensitivity or skin rash can be caused by abacavir, carbamazepine or allopurinol.
    • Hepatotoxicity can be caused by flucloxacillin.
    • Myopathy can be caused by statins.
    • Cardiotoxicity can be caused by a variety of compounds.

T-Cell Response and HLA's Role

  • HLA is important in T-cell responses.
  • MHC stands for multiple histocompatibility complex.
  • The presentation results in maturation of T-cells to either helper or cytotoxic cells.
  • Cytotoxic T-cells can kill host cells and provoke local cellular damage.
  • TCR is the T-cell receptor.
  • The type of cell formed depends on the HLA class protein presenting the antigen.
  • Different antigens bind to different protein classes.
  • Antigens are normally small peptides from bacteria or viruses.
  • Sometimes, drugs attach to small host peptides, which antigen presenting cells may recognize as foreign.
  • HLA antigens contribute to idiosyncratic reactions, but not all.

HLA Genes

  • HLA Class 1 genes (A, B, C) are expressed on most cells and present endogenous antigens to CD8+ cytotoxic T cells.
  • HLA Class 1 genes are important in viral immunity and transplant rejection.
  • HLA Class 2 genes (DR, DQ, DP) are expressed on antigen-presenting cells (APCs) like dendritic cells, macrophages, and B cells.
  • HLA Class 2 genes present exogenous antigens to CD4+ helper T cells for adaptive immune response activation.
  • HLA proteins normally present peptide antigens to T cells but may inappropriately present drug-peptide complexes.

Abacavir Hypersensitivity

  • Abacavir is a widely used nucleoside reverse-transcriptase inhibitor (NRTI) in combination with antiretroviral therapy (cART) for HIV treatment.
  • Approximately 5% of patients develop hypersensitivity reactions that resolve on discontinuation.
  • Abacavir hypersensitivity syndrome (AHS) is a life-threatening, immune-mediated reaction.
  • Re-exposure to the drug results in a more severe reaction.
  • Up to 100% of hypersensitivity cases have one or two HLA B*57:01 alleles.
  • Detectable reactions include fever, rash, GI symptoms, and respiratory distress.
  • Carriers of HLA B*57:01 are also at risk.
  • Abacavir binds to the B*57:01 gene product, inducing a conformational change in the protein.
  • This can result in misidentification of self-peptides as foreign, triggering an inappropriate immune response.

Genotyping Data for Abacavir Hypersensitivity

  • The Mallal study (2002) found abacavir hypersensitivity generally worsens on re-exposure, has a prevalence of 4-8%, and can be life-threatening.
  • Abacavir binding to B*57:01 induces a conformational change, leading to incorrect recognition of self-peptides as foreign by the immune system (Illing and Ostrov et al, 2012).
  • The HLA-B*57:01 allele was found to have a:
    • 4.2% frequency in normal controls
    • 2% frequency in HIV-positive tolerant patients
    • 78% frequency in abacavir hypersensitive patients
  • The odds ratio is 117 (95% CI: 29-481).

Hughes et al, 2004

  • Meta-analysis on studies of abacavir hypersensitivity and HLA genotype.
  • 34% experience hypersensitivity from the HLA genotype.

Mechanism for Abacavir Hypersensitivity

  • T cells from HLA-B*57:01 positive donors proliferate and differentiate in vitro when stimulated with abacavir, yielding CD-8 positive cytotoxic T-cells.
  • Activated abacavir (or a metabolite) binds to the B*57:01 gene product, leading to inappropriate recognition of 'self-peptides' and an inappropriate T cell response.
  • AHS reactions result from abacavir directly binding to the peptide-binding groove of HLA-B*57:01.
  • This binding alters antigen presentation and triggers an immune response.
  • B*57:01 genotyping is now required prior to abacavir treatment, as recommended by the FDA.
  • Patients testing positive should receive an alternative NRTI (e.g., tenofovir), while negative patients can use abacavir safely.
  • No covalent binding is involved, unlike typical drug-peptide complex interactions.

Steven-Johnson Syndrome (SJS) and Skin Rashes

  • Carbamazepine (CBZ) is an anti-epileptic drug used for epilepsy, bipolar disorder, and terminal neuralgia.
  • CBZ is associated with severe cutaneous adverse drug reactions (cADRs), including Steven Johnson Syndrome (SJS) and Toxic Epidermal Necrolysis (TEN).
  • SJS is a widespread rash resulting in significant fluid loss with marked consequences.
  • SJS can occur in up to 10% of patients and may be a precursor for hypersensitivity syndrome.

Genetic Associations with SJS

  • B*15:02 is strongly linked to SJS/TEN in individuals of East Asian and Southeast Asian descent, especially in Chinese, Indonesian, Thai and Malaysian populations (but not Japanese).
  • Carbamazepine interacts with HLA-B*15:02 molecules, leading to T-cell activation and skin necrosis.
  • Screening is mandatory in high-risk populations, e.g., Han Chinese, Thai, Malaysians, and Indians.
  • B*58:01 is less frequent in Europeans.
  • Chinese and Taiwanese patients showing SJS due to this compound are usually positive for HLA-B*15:02.
  • Certain other skin rashes relating to CBZ are not B*15:02-related.
  • Certain East Asians populations are screened for B*15:02 before CBZ is prescribed.
  • Europeans and Japanese show a role for A31:01 (HLA-A31:01).
  • Allopurinol is linked to SJS/TEN in individuals of East Asian and Southeast Asian descent.
  • Chinese with SJS or related reactions are usually positive for HLA-B*58:01.
  • Associated with multiple carbamazepine-induced hypersensitivity reactions, including SJS/TEN.
    • Drug reaction with eosinophilia and systemic symptoms (DRESS) and maculopapular eruptions.
  • More common in European and Japanese populations.
  • More minor effects are reported in Europeans.
  • The effect size with allopurinol is not sufficient to justify genotyping in either population.
  • Phenytoin, an aromatic anticonvulsant is associated with a high risk of severe cutaneous adverse reactions (SCAR).
  • In South Asian countries, SJS and TEN due to phenytoin correlate to HLA-B*15:02 which isn't as strong as with carbamazepine.
  • Several South Asians showed a strong association with CYP2C9*3 & phenytoin-induced SCAR.
  • This indicates slower phenytoin metabolism via CYP2C9 and higher systemic exposure predisposes serious skin reactions.

Clinical Implementation

  • HLA-B*15:02 testing is required before prescribing carbamazepine in high-risk ethnic groups.
  • HLA-A*31:01 testing is recommended in some populations where this allele is prevalent.
  • Alternative AEDs (e.g., lamotrigine, levetiracetam, or valproate) should be considered for patients testing positive.

Conclusion

  • Pharmacogenetic screening for HLA-B57:01 (abacavir) and HLA-B15:02/HLA-A*31:01 (carbamazepine) improves drug safety by reducing hypersensitivity reactions.
  • Implementing these genetic tests in clinical practice ensures personalized medicine, minimizing severe adverse effects while maintaining therapeutic efficacy.

Drug-Induced Liver Injury (DILI)

  • Rare but serious idiosyncratic toxicity occurs in 1 of every 10,000 to 100,000 patients with certain drugs.
  • Both metabolic and immune factors likely play a role in susceptibility.
  • A US-based study showed DILI accounted for 20% of all hospital admissions due to severe liver injury.
    • 50% of acute liver failure cases
    • 75% of them needed a liver transplant

Genetic Associations with DILI

  • Haplotypes with DILI were first reported during the 1980s in relation to injury with nitrofurantoin, halothane, and clometacin.
  • DRB1*1501 is associated with liver injury due to co-amoxicillin-clavulanate & lumiracoxib.
  • Class 1 allele A*33:01 is a risk factor for DILI relating to terbinafine & ticlopidine, as well as other drugs.
  • Flucloxacillin can also cause liver injury in some patients.
  • HLA-B*5701 is associated with an 80-fold increase in DILI development.
  • More common in Europeans than East Asians.
  • Hepatotoxicity with ticlopidine appears more common with Japanese patients than Europeans due to association with HLA-A*3303.
  • DILI develops several weeks after drug treatment. Therefore, polymorphisms affecting drug metabolism and transport also contribute.

Flucloxacillin

  • Beta-lactamase-resistant penicillin with an isoxazolyl ring.
  • Widely used to treat staphylococcal infections, especially in the UK, Australia, and Sweden.
  • Well-established cause of liver injury.
  • Probable second most important cause of DILI in the UK.

GWAS on Flucloxacillin DILI

  • 197 cases from UK, Sweden, and Netherlands.
  • Population controls selected to eliminate population stratification.
  • Illumina IM or human core exome chip was used.
  • The strongest signal was with a SNP in HCP5, which tags HLA-B*57:01.
  • The association with HLA-B*57:01 is similar to that for abacavir hypersensitivity.
  • Sensitivity and specificity of B*57:01 genotyping are lower as a predictor of flucloxacillin DILI than abacavir hypersensitivity.
    • Other, probably non-genetic, risk factors may contribute, including age.
  • GWAS provided evidence for a role of ST6GAL1, which encodes ST6 B-galactosamide-a-2,6-sialyltransferase.
    • This may be responsible for B-cell immune responses.
  • Augmentin has associations with both HLA 1 and 2 alleles in GWAS studies.
  • Amoxicillin is a penicillin (B-lactamase inhibitor) with the allele DRB1*15:01.
  • Mechanism: Inappropriate T-cell response.
  • The mechanism differs from that of abacavir and may involve covalent binding of the drug or a metabolite to the protein.
  • The specific HLA protein interacts with a drug complex to inappropriately present a peptide to T cells, causing a reaction.
  • This leads to local cellular damage.

Statin Myopathy

  • Ranges from mild to very rare but life-threatening rhabdomyolysis.
  • GWAS shows an important role in myopathy relating to simvastatin for the SLOC1B1 variant associated with decreased hepatic uptake.
  • SLOC1B1 encodes the hepatic statin transporter.
  • Higher plasma levels of simvastatin in those with decreased activity *5 variant.
  • May result in increased uptake into muscle tissue.

Genetic Associations with Statin Myopathy

  • SLOC1B1*5 identified as risk allele (Val174Ala)
  • This allele is associated with higher levels of statin in circulation.
  • Probably higher plasma level causes muscle toxicity.
  • Only 80 cases were required to show this effect.
  • The patients were being treated with simvastatin.
  • Patients can switch to a different statin.
  • D85N, a KCNE1 polymorphism encoding a voltage-gated potassium channel, is seen at a 1% population frequency.
    • More common in individuals who have suffered drug-induced QT prolongation.
    • Odds ratio of 9.
  • Treatment of Hepatitis C virus infection with interferon-a and ribavirin.
    • 50% of patients display a +ve response to this treatment and become essentially virus-
  • Polymorphisms adjacent to the IL-28B (interferon gamma-3) gene can predict the response of interferon-a, based on three independent GWAS.
  • In a study on bisphosphonate-induced osteonecrosis of the jaw, the CYP2C8 polymorphism had the strongest effect on GWAS.
    • This association is related to the physiological role for CYP2C8 inflammation.

Ion Channels and Serious Adverse Drug Reactions

  • A number of drugs can prolong cardiac repolarization.
    • Usually due to blockage of an outward ion channel with K channels the most important in cardiac muscle.
  • Some individuals with slight genetic abnormality in K channel have increased risk of sudden death due to drug-induced ventricular fibrillation.
  • Change in QT interval
  • Normal sinus rhythm compared to the Torsades de pointes.

Candidate Gene Studies on Drug-Induced Long QT

  • Paulussen et al, 2004:
    • 100 patients with drug-related long QT syndrome.
    • Sequenced genes for 4 potassium channels and 1 sodium channel.
    • Approx. 10% of patients had non-synonymous polymorphisms in one or more of these channels.
      • KCNE2 - 7 patients
      • KCNE1 - D85N (2 patients)
      • KCNH2 (hERG) - 3 patients
      • KCNQ1 - 3 patients
      • SCN5A - 4 patients
  • Nishio et al, 2009:
    • 317 patients
      • KCNE1 only.
      • D85N in 24 of 317 (0.038 or 3.8%) patients compared with 8 out of 496 controls (0.0008 or 0.5%).
  • Kaab et al, 2012:
    • 307 cases with Torsade de pointes
      • D85N present in 8.6% of cases but 1.8% of controls.
  • Polymorphisms are contributing, but not a complete explanation, as they only represent about 10% of cases.

NOS1AP Gene Affecting Length of QT Interval

  • GWAS showed a SNP in NOS1AP (nitric oxide synthase 1 activating protein) affects QT length in a population study.
  • The protein regulates intracellular calcium levels.
  • A variant of NOS1AP (RS10494366) significantly potentiates the QT prolongation effects of Verapamil.
  • NUBPL was also implicated in diQLTs.
  • Nitric oxide signaling may affect cardiac repolarization.
  • NOS1AP SNP is more common in patients showing QT prolongation in response to several drugs.
  • 2 different candidate gene studies agree on this.

GWAS Studies on Drug-Induced Long QT and Torsades de Pointes

  • At least 2 have been published, but no genome-wide significance was seen.
    • Likely due to small sample sizes (200 to 300).
  • The general conclusion is that common genetic variants are not important predictors for drug-induced cardiotoxicity.
  • More difficult to screen for rare variants, possible by exome sequencing.
  • Not as much progress has been made on pharmacogenetic basis of cardiotoxicity to date.

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Explore the differences between intrinsic (Type A) and idiosyncratic (Type B) adverse drug reactions. Type A reactions are predictable and dose-dependent, while Type B reactions are rare, unpredictable, and not related to the drug's known pharmacology. Learn about examples and implications of these reactions.

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